Cow genome map

Conread name: rcmu39_j5.y1

Conread position: 1-201
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 92

Conread position: 1-221
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 84

Conread position: 1-232
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 92

Conread position: 1-234
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 92

Conread position: 1-236
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 6, 91

Conread position: 1-237
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 9, 102

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 106

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 55

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 6, 92

Conread position: 1-238
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 1-238
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 91

Conread position: 2-238
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 8, 90

Conread position: 3-238
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 88

Conread position: 3-239
Cow position:
Alignm length: 246
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 5, 90

Conread position: 4-171
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 18

Conread position: 4-172
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 18

Conread position: 4-190
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 29, 81

Conread position: 4-213
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 18

Conread position: 4-229
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 18

Conread position: 4-234
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 25, 18

Conread position: 4-234
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 5, 91

Conread position: 4-236
Cow position:
Alignm length: 235
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 4-237
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 95

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 6, 103

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 81

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 6-156
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 95

Conread position: 6-163
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 100

Conread position: 6-179
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 97

Conread position: 6-184
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 96

Conread position: 6-207
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 97

Conread position: 6-211
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 86

Conread position: 6-214
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 54

Conread position: 6-218
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 25, 97

Conread position: 6-218
Cow position:
Alignm length: 221
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 97

Conread position: 6-220
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 25, 96

Conread position: 6-237
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 86

Conread position: 6-237
Cow position:
Alignm length: 240
Alignm identity: 179
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 81

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 106

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 25, 86

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 86

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 86

Conread position: 12-238
Cow position:
Alignm length: 228
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 82

Conread position: 15-238
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 15, 79

Conread position: 22-167
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 64

Conread position: 26-236
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 27-171
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 27-189
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 27-191
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 27-192
Cow position:
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 27-209
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 27-212
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 27-218
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 50

Conread position: 27-221
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 27-222
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 27-226
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 27-227
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 193, 67

Conread position: 27-230
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 27-232
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 27-234
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 45, 50

Conread position: 27-235
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 27-237
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 27-238
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 50

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 178, 57

Conread position: 27-239
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 50

Conread position: 27-239
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 68

Conread position: 27-239
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 112, 67

Conread position: 27-239
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 45, 50

Conread position: 27-239
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 57

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 28-222
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 9, 57

Conread position: 28-236
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 28-236
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 57

Conread position: 28-238
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 7, 67

Conread position: 28-238
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 17, 57

Conread position: 28-238
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 66, 0

Conread position: 28-239
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 49

Conread position: 31-236
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 36-176
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 36-238
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 37-239
Cow position:
Alignm length: 203
Alignm identity: 158
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 39-189
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 44-238
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.