Cow genome map


           Conread name:
           rcmu39_j5.y1
        

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 91
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               4-156
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-190
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-190
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               4-201
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-201
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-209
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               21, 81
               

               Conread position:
               4-209
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-236
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-236
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               5-236
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               26, 98
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               6-170
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               6-190
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               6-236
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               6-237
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               6-239
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               6-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               22-208
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               22-239
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               26-212
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               27-169
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               122, 57
               

               Conread position:
               27-178
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               27-188
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               27-231
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               125, 67
               

               Conread position:
               27-234
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-234
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               130, 66
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               109, 57
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               201, 51
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               182, 57
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               117, 57
               

               Conread position:
               28-232
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 72
               

               Conread position:
               28-238
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               9, 156
               

               Conread position:
               31-210
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               31-238
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               35-235
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               36-238
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               36-239
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               36-239
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               38-239
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               45-237
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 0
               
Show alignments to all cow chromosomes.