Cow genome map
Conread name: | rcmu39_j5.y1 |
Conread position: | 1-168 |
Cow position: | chr21:36506449-36506623 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 132 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 9, 106 |
Conread position: | 1-177 |
Cow position: | chr21:15546299-15546476 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 138 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 9, 86 |
Conread position: | 1-178 |
Cow position: | chr21:34900293-34900469 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 14, 95 |
Conread position: | 1-237 |
Cow position: | chr21:3253012-3252766 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 189 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 9, 31 |
Conread position: | 1-238 |
Cow position: | chr21:2664776-2665017 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 181 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 9, 92 |
Conread position: | 1-238 |
Cow position: | chr21:4035873-4036110 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 179 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 9, 93 |
Conread position: | 1-238 |
Cow position: | chr21:5020535-5020291 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 189 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 9, 92 |
Conread position: | 1-238 |
Cow position: | chr21:10853654-10853410 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 181 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 9, 92 |
Conread position: | 1-238 |
Cow position: | chr21:37923576-37923332 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 92 |
Conread position: | 1-238 |
Cow position: | chr21:39470375-39470620 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 190 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 9, 104 |
Conread position: | 1-239 |
Cow position: | chr21:26699277-26699522 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 191 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 9, 91 |
Conread position: | 2-239 |
Cow position: | chr21:27263078-27262841 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 178 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 7, 90 |
Conread position: | 3-222 |
Cow position: | chr21:15274729-15274506 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 6, 83 |
Conread position: | 4-149 |
Cow position: | chr21:26874970-26874827 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-178 |
Cow position: | chr21:39417455-39417282 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 132 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 11, 81 |
Conread position: | 4-221 |
Cow position: | chr21:14533991-14533775 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 164 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-238 |
Cow position: | chr21:30056326-30056559 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 175 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr21:30297857-30297623 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 181 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 11, 19 |
Conread position: | 4-238 |
Cow position: | chr21:35024741-35024508 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-238 |
Cow position: | chr21:36376368-36376135 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 12, 81 |
Conread position: | 4-238 |
Cow position: | chr21:41796343-41796576 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr21:42917171-42916939 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 170 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 5-239 |
Cow position: | chr21:2524299-2524067 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 165 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 32, 89 |
Conread position: | 6-157 |
Cow position: | chr21:38866229-38866386 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 24, 97 |
Conread position: | 6-168 |
Cow position: | chr21:25598056-25597888 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 132 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-226 |
Cow position: | chr21:4097958-4097735 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 174 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 25, 86 |
Conread position: | 6-226 |
Cow position: | chr21:32237722-32237496 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-236 |
Cow position: | chr21:2514234-2513997 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 182 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 25, 86 |
Conread position: | 6-236 |
Cow position: | chr21:26615501-26615724 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 61, 71 |
Conread position: | 6-237 |
Cow position: | chr21:43099-42863 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 183 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 23, 86 |
Conread position: | 6-238 |
Cow position: | chr21:4898581-4898816 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr21:5642453-5642691 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr21:6864177-6864406 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 166 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 34, 80 |
Conread position: | 6-238 |
Cow position: | chr21:6966096-6966327 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 175 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 23, 16 |
Conread position: | 6-238 |
Cow position: | chr21:7047797-7048037 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 6-238 |
Cow position: | chr21:11405497-11405735 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 184 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 21, 97 |
Conread position: | 6-238 |
Cow position: | chr21:11509324-11509086 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr21:19351478-19351716 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 184 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr21:27148169-27148406 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 182 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 25, 96 |
Conread position: | 6-238 |
Cow position: | chr21:27620117-27620351 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 181 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 25, 100 |
Conread position: | 6-238 |
Cow position: | chr21:30966560-30966798 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 183 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr21:34180714-34180952 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 183 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr21:34823559-34823321 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 21, 97 |
Conread position: | 6-238 |
Cow position: | chr21:39428785-39428547 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr21:48273814-48274052 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 97 |
Conread position: | 6-239 |
Cow position: | chr21:37323417-37323655 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 174 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 25, 66 |
Conread position: | 8-234 |
Cow position: | chr21:37374592-37374364 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 178 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 23, 84 |
Conread position: | 8-238 |
Cow position: | chr21:3804408-3804635 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 169 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 19-239 |
Cow position: | chr21:46974732-46974948 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 166 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 26-235 |
Cow position: | chr21:3046694-3046484 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 164, 57 |
Conread position: | 26-238 |
Cow position: | chr21:4733176-4733384 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 157 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 68, 113 |
Conread position: | 27-165 |
Cow position: | chr21:23489964-23490099 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 103 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-179 |
Cow position: | chr21:42460703-42460848 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-189 |
Cow position: | chr21:47977621-47977461 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 125 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 27-207 |
Cow position: | chr21:28908786-28908962 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-218 |
Cow position: | chr21:2768489-2768676 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 145 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-221 |
Cow position: | chr21:48262170-48261980 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 155 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 27-225 |
Cow position: | chr21:28476453-28476648 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 145 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-230 |
Cow position: | chr21:47944314-47944113 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 143 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-234 |
Cow position: | chr21:4586324-4586529 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 158 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 16, 58 |
Conread position: | 27-235 |
Cow position: | chr21:4722011-4721807 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 156 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-235 |
Cow position: | chr21:27428762-27428968 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 164 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 100, 57 |
Conread position: | 27-235 |
Cow position: | chr21:47360815-47361020 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 27-236 |
Cow position: | chr21:4559715-4559921 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-236 |
Cow position: | chr21:13112039-13112244 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 27-236 |
Cow position: | chr21:23548905-23549106 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 147 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 101, 67 |
Conread position: | 27-236 |
Cow position: | chr21:33710145-33710352 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 161 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 27-237 |
Cow position: | chr21:9895716-9895509 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 153 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-238 |
Cow position: | chr21:449522-449314 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 27-238 |
Cow position: | chr21:7062248-7062457 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 161 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 27-238 |
Cow position: | chr21:16890488-16890697 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-238 |
Cow position: | chr21:18285160-18284956 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 153 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 27-238 |
Cow position: | chr21:22719743-22719950 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-238 |
Cow position: | chr21:30595736-30595945 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 158 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 27-238 |
Cow position: | chr21:33420614-33420831 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 166 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 59, 163 |
Conread position: | 27-238 |
Cow position: | chr21:33998162-33998377 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 166 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 27-238 |
Cow position: | chr21:47428697-47428488 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 162 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-239 |
Cow position: | chr21:1766165-1766374 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 162 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 27-239 |
Cow position: | chr21:26633875-26634083 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-239 |
Cow position: | chr21:48291997-48292206 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 166 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 28-207 |
Cow position: | chr21:33415712-33415892 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 133 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 7, 57 |
Conread position: | 31-237 |
Cow position: | chr21:25156650-25156435 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 160 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 141, 51 |
Conread position: | 31-238 |
Cow position: | chr21:31252340-31252144 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 151 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 36-222 |
Cow position: | chr21:22855258-22855079 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 132 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 36-239 |
Cow position: | chr21:44862220-44862422 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 156 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 72, 48 |
Show alignments to all cow chromosomes.