Cow genome map

Conread name: rcmu39_j5.y1

Conread position: 1-179
Cow position: chr22:31645306-31645121 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 101

Conread position: 1-210
Cow position: chr22:32209827-32209607 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 1-222
Cow position: chr22:25968444-25968667 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 92

Conread position: 1-234
Cow position: chr22:5015303-5015063 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 9, 92

Conread position: 1-234
Cow position: chr22:8734320-8734558 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 141

Conread position: 1-236
Cow position: chr22:22607374-22607132 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 103

Conread position: 1-238
Cow position: chr22:5315456-5315212 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 6, 100

Conread position: 1-238
Cow position: chr22:10577272-10577516 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 103

Conread position: 1-238
Cow position: chr22:12225681-12225923 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 90

Conread position: 1-238
Cow position: chr22:26104923-26105167 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position: chr22:35668448-35668696 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position: chr22:35910272-35910516 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 9, 102

Conread position: 1-239
Cow position: chr22:6339869-6339625 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 30, 91

Conread position: 3-238
Cow position: chr22:3489122-3489362 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 6, 102

Conread position: 3-238
Cow position: chr22:37270309-37270068 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 28, 100

Conread position: 4-164
Cow position: chr22:699150-698992 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 81

Conread position: 4-175
Cow position: chr22:33449080-33449251 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 81

Conread position: 4-178
Cow position: chr22:8776513-8776686 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 92

Conread position: 4-195
Cow position: chr22:25942454-25942260 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 91

Conread position: 4-227
Cow position: chr22:32943653-32943431 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position: chr22:15013484-15013721 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 13

Conread position: 4-238
Cow position: chr22:20569836-20570069 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position: chr22:25724799-25725032 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position: chr22:26090031-26090264 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position: chr22:28997382-28997615 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position: chr22:34758857-34759090 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position: chr22:39902586-39902353 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position: chr22:45281154-45280921 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 5-238
Cow position: chr22:28714066-28713834 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 10, 91

Conread position: 6-148
Cow position: chr22:10550076-10549928 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 97

Conread position: 6-200
Cow position: chr22:16203009-16202812 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 95

Conread position: 6-201
Cow position: chr22:40326505-40326304 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 25, 86

Conread position: 6-216
Cow position: chr22:36357267-36357051 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 86

Conread position: 6-234
Cow position: chr22:7279754-7279520 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 78

Conread position: 6-234
Cow position: chr22:18613958-18614192 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position: chr22:540344-540107 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 85

Conread position: 6-238
Cow position: chr22:557492-557730 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position: chr22:981501-981263 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position: chr22:3275147-3275385 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position: chr22:3714293-3714531 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position: chr22:10906995-10907233 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position: chr22:21192992-21193230 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 96

Conread position: 6-238
Cow position: chr22:22107253-22107015 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position: chr22:25336361-25336123 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position: chr22:26943999-26944237 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position: chr22:30675517-30675755 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 101

Conread position: 6-238
Cow position: chr22:40828858-40829097 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 97

Conread position: 6-238
Cow position: chr22:43236047-43235809 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position: chr22:44366000-44366238 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 25, 86

Conread position: 6-239
Cow position: chr22:27306754-27306993 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 25, 97

Conread position: 6-239
Cow position: chr22:44925116-44925356 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 84

Conread position: 6-239
Cow position: chr22:46611812-46612039 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 54

Conread position: 7-236
Cow position: chr22:14731831-14732059 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 85

Conread position: 10-218
Cow position: chr22:4291878-4291678 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 22

Conread position: 26-238
Cow position: chr22:9371540-9371334 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 51, 59

Conread position: 26-239
Cow position: chr22:19048589-19048803 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 62

Conread position: 27-168
Cow position: chr22:12625376-12625515 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 27-202
Cow position: chr22:5334363-5334534 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 27-203
Cow position: chr22:11779586-11779759 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 27-214
Cow position: chr22:15055752-15055565 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 81, 46

Conread position: 27-218
Cow position: chr22:18191689-18191499 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 56, 0

Conread position: 27-220
Cow position: chr22:13768486-13768296 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 27-226
Cow position: chr22:32019378-32019576 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 50

Conread position: 27-234
Cow position: chr22:51693-51492 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 27-235
Cow position: chr22:12728480-12728686 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 27-235
Cow position: chr22:34615221-34615016 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 27-236
Cow position: chr22:3303481-3303679 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 27-236
Cow position: chr22:15888994-15888790 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 50

Conread position: 27-236
Cow position: chr22:34607671-34607462 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 131

Conread position: 27-237
Cow position: chr22:30918271-30918063 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position: chr22:1863829-1863620 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 171, 67

Conread position: 27-238
Cow position: chr22:12969223-12969421 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 175, 57

Conread position: 27-238
Cow position: chr22:14629202-14629411 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position: chr22:24143276-24143491 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 57

Conread position: 27-238
Cow position: chr22:32338503-32338295 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 27-238
Cow position: chr22:40609583-40609374 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 50

Conread position: 27-238
Cow position: chr22:44381277-44381486 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position: chr22:45893948-45893739 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 27-239
Cow position: chr22:21957345-21957138 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 27-239
Cow position: chr22:25340334-25340127 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 55, 0

Conread position: 27-239
Cow position: chr22:40589572-40589361 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 55

Conread position: 27-239
Cow position: chr22:46440136-46440336 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 28-184
Cow position: chr22:17781770-17781929 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 57

Conread position: 28-211
Cow position: chr22:11036668-11036487 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 31-157
Cow position: chr22:8881323-8881199 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 31-238
Cow position: chr22:10602032-10601836 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 164, 53

Conread position: 36-238
Cow position: chr22:36541105-36541304 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 37-176
Cow position: chr22:14510346-14510483 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 37-226
Cow position: chr22:13290029-13289842 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 40

Conread position: 37-238
Cow position: chr22:36595338-36595530 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 37-239
Cow position: chr22:21756556-21756355 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 155, 56

Show alignments to all cow chromosomes.