Cow genome map
Conread name: | rcmu39_j5.y1 |
Conread position: | 1-178 |
Cow position: | chr23:954595-954771 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 139 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 28, 21 |
Conread position: | 1-237 |
Cow position: | chr23:1010335-1010576 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 172 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 9, 101 |
Conread position: | 1-238 |
Cow position: | chr23:14265556-14265315 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 184 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 9, 92 |
Conread position: | 1-238 |
Cow position: | chr23:20153012-20153256 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 188 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 9, 92 |
Conread position: | 1-238 |
Cow position: | chr23:20541030-20540786 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 188 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 9, 92 |
Conread position: | 1-239 |
Cow position: | chr23:2737431-2737187 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 174 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 10, 102 |
Conread position: | 2-236 |
Cow position: | chr23:14970751-14970984 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 179 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 27, 20 |
Conread position: | 3-161 |
Cow position: | chr23:38935007-38935172 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 130 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 7, 101 |
Conread position: | 4-178 |
Cow position: | chr23:31772068-31772241 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr23:771293-771526 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 81 |
Conread position: | 4-238 |
Cow position: | chr23:3417130-3417363 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 177 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr23:5396382-5396615 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 179 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr23:10937104-10937337 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 177 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr23:14216026-14216258 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-238 |
Cow position: | chr23:25351558-25351325 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-238 |
Cow position: | chr23:28083895-28084128 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 175 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr23:29042981-29042748 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 11, 80 |
Conread position: | 4-238 |
Cow position: | chr23:39745062-39744829 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-238 |
Cow position: | chr23:41143639-41143406 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 179 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 5-214 |
Cow position: | chr23:7065567-7065770 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 146 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 10, 90 |
Conread position: | 5-236 |
Cow position: | chr23:13536627-13536399 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 173 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 136, 31 |
Conread position: | 6-237 |
Cow position: | chr23:31704098-31703861 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr23:3285962-3285724 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr23:4532494-4532732 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr23:10679630-10679868 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr23:11079580-11079349 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 16 |
Conread position: | 6-238 |
Cow position: | chr23:11712464-11712702 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 183 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr23:21008401-21008639 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 97 |
Conread position: | 6-238 |
Cow position: | chr23:27974730-27974957 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 161 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 186, 78 |
Conread position: | 6-238 |
Cow position: | chr23:28221904-28221667 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 176 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 25, 103 |
Conread position: | 6-238 |
Cow position: | chr23:28987546-28987316 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 177 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr23:31605631-31605393 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-239 |
Cow position: | chr23:24119758-24119519 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 184 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-239 |
Cow position: | chr23:25357549-25357310 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 178 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 25, 86 |
Conread position: | 6-239 |
Cow position: | chr23:30211456-30211677 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 165 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 8-239 |
Cow position: | chr23:16611615-16611845 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 180 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 21, 71 |
Conread position: | 10-176 |
Cow position: | chr23:21277435-21277606 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 135 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 23, 81 |
Conread position: | 27-189 |
Cow position: | chr23:33817619-33817463 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-216 |
Cow position: | chr23:24517008-24516826 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 137 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 99, 32 |
Conread position: | 27-232 |
Cow position: | chr23:26318458-26318256 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 156, 57 |
Conread position: | 27-234 |
Cow position: | chr23:29625148-29624949 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 151 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 27-235 |
Cow position: | chr23:26840137-26839931 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 160 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-236 |
Cow position: | chr23:10421704-10421913 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 150 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 39, 48 |
Conread position: | 27-238 |
Cow position: | chr23:609903-609694 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 159 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 27-238 |
Cow position: | chr23:4436806-4436598 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 159 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 165, 57 |
Conread position: | 27-238 |
Cow position: | chr23:5441092-5440883 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 165 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 27-238 |
Cow position: | chr23:11128193-11127979 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 166 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 93, 57 |
Conread position: | 27-238 |
Cow position: | chr23:14790658-14790449 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 161 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 27-239 |
Cow position: | chr23:21772736-21772945 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 162 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 28-238 |
Cow position: | chr23:4516715-4516506 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 158 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 5, 56 |
Conread position: | 31-238 |
Cow position: | chr23:29441927-29442130 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 160 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 32-238 |
Cow position: | chr23:616100-616300 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 156 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 36-196 |
Cow position: | chr23:34347039-34346881 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 129 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 36-211 |
Cow position: | chr23:29460086-29460259 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 36-238 |
Cow position: | chr23:345290-345490 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 44-238 |
Cow position: | chr23:1248370-1248562 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 150 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.