Cow genome map


           Conread name:
           rcmu39_j5.y1
        

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               9, 106
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               6, 107
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 98
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 90
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               9, 113
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               2-238
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 91
               

               Conread position:
               2-239
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               8, 91
               

               Conread position:
               3-161
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               3-238
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 101
               

               Conread position:
               3-239
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 90
               

               Conread position:
               4-236
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-239
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               6, 99
               

               Conread position:
               6-189
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               6-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               6-237
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               25, 100
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               25, 100
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               6-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               8-236
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               22-176
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               22-238
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               24-239
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               27-156
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               27-161
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               27-162
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-189
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-235
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               147, 57
               

               Conread position:
               27-236
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-236
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               27-236
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-237
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-237
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               111, 57
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               112, 57
               

               Conread position:
               28-234
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               28-238
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 57
               

               Conread position:
               31-238
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               31-238
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               36-239
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               36-239
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               36-239
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               37-238
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               39-239
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               79, 45
               
Show alignments to all cow chromosomes.