Cow genome map


           Conread name:
           rcmu39_j5.y1
        

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               30, 79
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 92
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 92
               

               Conread position:
               3-236
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               3-238
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               6, 104
               

               Conread position:
               3-239
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               7, 90
               

               Conread position:
               4-156
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-176
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-231
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-236
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               6-186
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               6-190
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-232
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 85
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               26, 86
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 78
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               186, 18
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               22-221
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               22-236
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               27-235
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-236
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-236
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-236
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-236
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               81, 56
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 90
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               28-236
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               9, 68
               

               Conread position:
               31-217
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               31-238
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               36-239
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               48, 109
               
Show alignments to all cow chromosomes.