Cow genome map
Conread name: | rcmu39_j5.y1 |
Conread position: | 1-232 |
Cow position: | chr28:1811717-1811941 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 171 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 8, 84 |
Conread position: | 1-236 |
Cow position: | chr28:10772339-10772099 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 186 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 6, 102 |
Conread position: | 1-236 |
Cow position: | chr28:19834370-19834121 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 191 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 9, 206 |
Conread position: | 1-237 |
Cow position: | chr28:10280104-10279868 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 175 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 9, 88 |
Conread position: | 1-238 |
Cow position: | chr28:2088831-2088586 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 181 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 9, 93 |
Conread position: | 1-238 |
Cow position: | chr28:3627269-3627027 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 187 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 9, 103 |
Conread position: | 1-238 |
Cow position: | chr28:7907290-7907533 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 102 |
Conread position: | 1-238 |
Cow position: | chr28:8717697-8717941 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 92 |
Conread position: | 1-238 |
Cow position: | chr28:34583180-34582936 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 188 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 9, 103 |
Conread position: | 1-238 |
Cow position: | chr28:34597500-34597256 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 187 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 6, 92 |
Conread position: | 3-230 |
Cow position: | chr28:10162484-10162258 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 170 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 8, 90 |
Conread position: | 4-171 |
Cow position: | chr28:331655-331821 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 130 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-236 |
Cow position: | chr28:1956614-1956383 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 172 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-236 |
Cow position: | chr28:6478464-6478233 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 177 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-237 |
Cow position: | chr28:6776758-6776990 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 172 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 11, 95 |
Conread position: | 4-238 |
Cow position: | chr28:4929205-4929438 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 175 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr28:6472194-6472425 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 176 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 25, 13 |
Conread position: | 4-238 |
Cow position: | chr28:7829751-7829519 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 175 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-238 |
Cow position: | chr28:12217044-12217277 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-238 |
Cow position: | chr28:15054401-15054172 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 175 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr28:16181613-16181380 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 180 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-238 |
Cow position: | chr28:23310091-23310324 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-238 |
Cow position: | chr28:24886105-24885872 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 175 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-238 |
Cow position: | chr28:25849806-25849573 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 92 |
Conread position: | 4-239 |
Cow position: | chr28:482463-482697 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 18 |
Conread position: | 4-239 |
Cow position: | chr28:17369325-17369100 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 169 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 11, 81 |
Conread position: | 6-173 |
Cow position: | chr28:6320044-6319872 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 136 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-212 |
Cow position: | chr28:34649622-34649408 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 153 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 46, 166 |
Conread position: | 6-236 |
Cow position: | chr28:11501972-11502202 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 177 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 26, 90 |
Conread position: | 6-236 |
Cow position: | chr28:22230082-22230316 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 177 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 25, 99 |
Conread position: | 6-237 |
Cow position: | chr28:29473241-29473003 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 169 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 64, 71 |
Conread position: | 6-238 |
Cow position: | chr28:5312224-5311986 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 183 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr28:7059480-7059242 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 180 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr28:7336233-7335995 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 25, 86 |
Conread position: | 6-238 |
Cow position: | chr28:7443219-7443457 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 183 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 24, 97 |
Conread position: | 6-238 |
Cow position: | chr28:9288143-9288381 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 97 |
Conread position: | 6-238 |
Cow position: | chr28:10194355-10194593 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 97 |
Conread position: | 6-238 |
Cow position: | chr28:13323383-13323145 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 183 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr28:15604867-15604623 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 181 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 6-238 |
Cow position: | chr28:20967419-20967657 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 86 |
Conread position: | 6-238 |
Cow position: | chr28:21896532-21896294 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 97 |
Conread position: | 6-238 |
Cow position: | chr28:28357534-28357771 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 173 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 25, 86 |
Conread position: | 6-238 |
Cow position: | chr28:28471275-28471035 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 182 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-238 |
Cow position: | chr28:28929083-28928848 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 178 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 34, 25 |
Conread position: | 6-238 |
Cow position: | chr28:28934713-28934951 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 178 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 24, 100 |
Conread position: | 6-238 |
Cow position: | chr28:33639820-33639582 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 177 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 25, 86 |
Conread position: | 6-238 |
Cow position: | chr28:34730982-34730744 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 183 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 6-239 |
Cow position: | chr28:444658-444419 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 185 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 25, 100 |
Conread position: | 6-239 |
Cow position: | chr28:5637300-5637062 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 181 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 25, 86 |
Conread position: | 6-239 |
Cow position: | chr28:15917275-15917514 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 180 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 25, 86 |
Conread position: | 11-217 |
Cow position: | chr28:20408136-20407937 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 148 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 181, 55 |
Conread position: | 22-238 |
Cow position: | chr28:5791283-5791496 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 165 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 7, 64 |
Conread position: | 24-238 |
Cow position: | chr28:2644939-2644727 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 27-158 |
Cow position: | chr28:16597371-16597242 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-211 |
Cow position: | chr28:7685715-7685897 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 140 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 27-222 |
Cow position: | chr28:1197347-1197155 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 152 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 27-222 |
Cow position: | chr28:3652460-3652271 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 151 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 27-226 |
Cow position: | chr28:25826897-25827094 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 151 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-230 |
Cow position: | chr28:5816865-5816664 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 149 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-233 |
Cow position: | chr28:15600516-15600717 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 158 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 181, 67 |
Conread position: | 27-234 |
Cow position: | chr28:26923409-26923614 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 160 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 27-235 |
Cow position: | chr28:17030874-17031073 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 157 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 27-236 |
Cow position: | chr28:14666367-14666161 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 156 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 104, 57 |
Conread position: | 27-236 |
Cow position: | chr28:28184612-28184399 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 162 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 64, 125 |
Conread position: | 27-238 |
Cow position: | chr28:3004298-3004509 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 159 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 27-238 |
Cow position: | chr28:4958283-4958498 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 134, 55 |
Conread position: | 27-238 |
Cow position: | chr28:5825070-5824847 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 27-238 |
Cow position: | chr28:9182090-9181881 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 162 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 27-238 |
Cow position: | chr28:10479669-10479876 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 27-238 |
Cow position: | chr28:13880741-13880531 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 162 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 45, 50 |
Conread position: | 27-238 |
Cow position: | chr28:30304789-30304997 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 60, 43 |
Conread position: | 27-238 |
Cow position: | chr28:32730793-32731000 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 160 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 27-239 |
Cow position: | chr28:10303059-10302849 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 164 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 27-239 |
Cow position: | chr28:24499269-24499061 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 161 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 166, 56 |
Conread position: | 28-233 |
Cow position: | chr28:25596124-25595920 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 158 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 9, 67 |
Conread position: | 31-207 |
Cow position: | chr28:23839237-23839063 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 137 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 31-235 |
Cow position: | chr28:25701720-25701918 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 152 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 36-236 |
Cow position: | chr28:13522897-13522701 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 155 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 145, 48 |
Conread position: | 36-236 |
Cow position: | chr28:31848722-31848915 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 153 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 162, 48 |
Conread position: | 36-238 |
Cow position: | chr28:24671005-24670806 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 37-239 |
Cow position: | chr28:2662749-2662947 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 152, 55 |
Conread position: | 40-239 |
Cow position: | chr28:5569572-5569381 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 146 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 43-234 |
Cow position: | chr28:25762089-25761905 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 142 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 44-190 |
Cow position: | chr28:30249289-30249433 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 45-238 |
Cow position: | chr28:26717935-26717742 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 145 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.