Cow genome map


           Conread name:
           rcmu39_j5.y1
        

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               6, 102
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               9, 206
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 102
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               6, 92
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 90
               

               Conread position:
               4-171
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-236
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-236
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-237
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               11, 95
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               4-239
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 18
               

               Conread position:
               4-239
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 81
               

               Conread position:
               6-173
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-212
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 166
               

               Conread position:
               6-236
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 90
               

               Conread position:
               6-236
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               25, 99
               

               Conread position:
               6-237
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               64, 71
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 100
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               6-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 100
               

               Conread position:
               6-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               6-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               11-217
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               181, 55
               

               Conread position:
               22-238
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               24-238
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               27-158
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-211
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               27-222
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               27-222
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               27-226
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-230
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-233
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               181, 67
               

               Conread position:
               27-234
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               27-235
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               27-236
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 57
               

               Conread position:
               27-236
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               64, 125
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               134, 55
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 43
               

               Conread position:
               27-238
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               27-239
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               166, 56
               

               Conread position:
               28-233
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               31-207
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               31-235
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               36-236
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               145, 48
               

               Conread position:
               36-236
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               162, 48
               

               Conread position:
               36-238
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               37-239
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               152, 55
               

               Conread position:
               40-239
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               43-234
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               44-190
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               45-238
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.