Cow genome map

Conread name: rcmu39_j5.y1

Conread position: 1-164
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 91

Conread position: 1-233
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 21

Conread position: 1-236
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 101

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 16

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 103

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 9, 106

Conread position: 1-238
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 1-238
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 9, 106

Conread position: 1-238
Cow position:
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 86

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 9, 92

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 84

Conread position: 1-239
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 79

Conread position: 1-239
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 5, 90

Conread position: 3-238
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 7, 86

Conread position: 4-167
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 18

Conread position: 4-174
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 92

Conread position: 4-178
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 18

Conread position: 4-190
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 25, 18

Conread position: 4-205
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 18

Conread position: 4-210
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 25, 18

Conread position: 4-214
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 11, 92

Conread position: 4-232
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 18

Conread position: 4-236
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 43

Conread position: 4-237
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 13

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 81

Conread position: 4-238
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 13

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 13

Conread position: 4-238
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 29, 92

Conread position: 5-180
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 80

Conread position: 5-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 91

Conread position: 6-194
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 97

Conread position: 6-197
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 96

Conread position: 6-198
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 80

Conread position: 6-210
Cow position:
Alignm length: 213
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 97

Conread position: 6-210
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 6-214
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 97

Conread position: 6-235
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 29, 91

Conread position: 6-236
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 86

Conread position: 6-236
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 86

Conread position: 6-236
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 101

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 82

Conread position: 6-238
Cow position:
Alignm length: 243
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 80

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 97

Conread position: 6-239
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 85

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 97

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 86

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 78

Conread position: 7-236
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 81

Conread position: 14-214
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 15-217
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 9

Conread position: 20-235
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 163, 0

Conread position: 26-238
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 26-239
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 27-161
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 27-172
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 27-178
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 27-189
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 92, 57

Conread position: 27-190
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 100, 57

Conread position: 27-208
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 27-209
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 27-232
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 152, 57

Conread position: 27-235
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 27-235
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 0

Conread position: 27-236
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 27-237
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 165, 68

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 27-238
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 27-238
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 111, 57

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 197

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 0

Conread position: 27-239
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 57

Conread position: 27-239
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 103, 57

Conread position: 28-234
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 57

Conread position: 28-239
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 57

Conread position: 29-238
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 66

Conread position: 31-190
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 46

Conread position: 31-207
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 31-236
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 31-237
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 36-234
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 42

Conread position: 36-237
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 48

Conread position: 36-238
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 37-231
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 39-238
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.