Cow genome map
| Conread name: | rcmu39_j5.y1 |
| Conread position: | 1-189 |
| Cow position: | chr6:21711891-21711694 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 8, 92 |
| Conread position: | 1-232 |
| Cow position: | chr6:65930443-65930191 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-236 |
| Cow position: | chr6:21832475-21832716 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 1-236 |
| Cow position: | chr6:51150127-51149885 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 1-237 |
| Cow position: | chr6:15276055-15276297 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 9, 102 |
| Conread position: | 1-238 |
| Cow position: | chr6:10266906-10267151 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 1-238 |
| Cow position: | chr6:17927600-17927364 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 1-238 |
| Cow position: | chr6:33508435-33508206 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 1-238 |
| Cow position: | chr6:60379348-60379104 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 2-236 |
| Cow position: | chr6:1104968-1105206 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 2-236 |
| Cow position: | chr6:11354002-11354228 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 2-238 |
| Cow position: | chr6:16050116-16050349 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 2-238 |
| Cow position: | chr6:26667848-26668082 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 2-238 |
| Cow position: | chr6:68030363-68030120 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 8, 102 |
| Conread position: | 2-239 |
| Cow position: | chr6:60167382-60167619 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 3-192 |
| Cow position: | chr6:64425974-64425779 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 3-210 |
| Cow position: | chr6:28476253-28476040 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 3-239 |
| Cow position: | chr6:44494390-44494153 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 6, 97 |
| Conread position: | 4-176 |
| Cow position: | chr6:21857191-21857362 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 4-178 |
| Cow position: | chr6:6034623-6034796 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-178 |
| Cow position: | chr6:23568419-23568592 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-189 |
| Cow position: | chr6:452089-452273 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-214 |
| Cow position: | chr6:67448752-67448961 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-236 |
| Cow position: | chr6:11453694-11453925 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 4-237 |
| Cow position: | chr6:58951950-58952179 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 6, 81 |
| Conread position: | 4-238 |
| Cow position: | chr6:888731-888498 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:2875857-2876090 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:3152392-3152159 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:7138167-7138399 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 4-238 |
| Cow position: | chr6:11019831-11019598 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 4-238 |
| Cow position: | chr6:13308222-13308444 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:14928633-14928400 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 4-238 |
| Cow position: | chr6:18519908-18520141 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:19103734-19103967 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 4-238 |
| Cow position: | chr6:20350915-20351148 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:22043834-22044067 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 4-238 |
| Cow position: | chr6:27151267-27151500 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 4-238 |
| Cow position: | chr6:27173003-27172771 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:28488404-28488627 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:31941041-31940808 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 4-238 |
| Cow position: | chr6:33489880-33490113 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 4-238 |
| Cow position: | chr6:33809260-33809493 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:39898124-39897891 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:44146773-44147006 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:49826078-49826311 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:56451921-56452154 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 4-238 |
| Cow position: | chr6:57521349-57521115 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 4-238 |
| Cow position: | chr6:61829403-61829170 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-238 |
| Cow position: | chr6:65819406-65819639 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 11, 81 |
| Conread position: | 4-238 |
| Cow position: | chr6:67173729-67173496 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 4-239 |
| Cow position: | chr6:12663141-12663375 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 5-190 |
| Cow position: | chr6:13405401-13405218 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 5-239 |
| Cow position: | chr6:55238870-55238636 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 6-169 |
| Cow position: | chr6:34017830-34017999 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-189 |
| Cow position: | chr6:23879877-23880066 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-190 |
| Cow position: | chr6:843649-843839 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 6-190 |
| Cow position: | chr6:14290331-14290506 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 6-204 |
| Cow position: | chr6:63177222-63177018 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 6-207 |
| Cow position: | chr6:13850917-13850711 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-221 |
| Cow position: | chr6:1796806-1796585 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-236 |
| Cow position: | chr6:2453025-2452791 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 6-236 |
| Cow position: | chr6:7191395-7191618 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 6-236 |
| Cow position: | chr6:17111986-17112222 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-236 |
| Cow position: | chr6:17386702-17386466 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-236 |
| Cow position: | chr6:52977979-52978212 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 6-237 |
| Cow position: | chr6:58072835-58072602 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 6-238 |
| Cow position: | chr6:126953-127191 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:328191-328419 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 6-238 |
| Cow position: | chr6:1507331-1507569 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:2089455-2089224 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 6-238 |
| Cow position: | chr6:6557140-6556902 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:9234690-9234453 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 6-238 |
| Cow position: | chr6:10044394-10044156 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:11869755-11869993 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:12997600-12997363 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:15480750-15480520 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 6-238 |
| Cow position: | chr6:16418503-16418745 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 6-238 |
| Cow position: | chr6:16593139-16592906 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 6-238 |
| Cow position: | chr6:18970261-18970490 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 91 |
| Conread position: | 6-238 |
| Cow position: | chr6:19713055-19713293 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 6-238 |
| Cow position: | chr6:22737527-22737766 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:26325020-26325258 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:26771942-26772180 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 6-238 |
| Cow position: | chr6:28065170-28064932 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 6-238 |
| Cow position: | chr6:28185140-28185389 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 25, 211 |
| Conread position: | 6-238 |
| Cow position: | chr6:31912996-31913234 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:33466137-33465901 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 6-238 |
| Cow position: | chr6:34129636-34129399 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:36230347-36230585 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:38932075-38932313 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:39912503-39912266 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 6-238 |
| Cow position: | chr6:43049016-43049254 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 6-238 |
| Cow position: | chr6:43620910-43620672 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:45479909-45480135 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 6-238 |
| Cow position: | chr6:45723973-45724204 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 90 |
| Conread position: | 6-238 |
| Cow position: | chr6:46947997-46947760 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 6-238 |
| Cow position: | chr6:53543304-53543542 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 6-238 |
| Cow position: | chr6:62664947-62664716 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 16 |
| Conread position: | 6-238 |
| Cow position: | chr6:67553411-67553174 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-239 |
| Cow position: | chr6:17595106-17595345 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-239 |
| Cow position: | chr6:37387757-37387518 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 12-236 |
| Cow position: | chr6:1498364-1498144 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 22-238 |
| Cow position: | chr6:35600836-35600620 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 64 |
| Conread position: | 22-239 |
| Cow position: | chr6:35883729-35883511 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 24-239 |
| Cow position: | chr6:41677087-41676874 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 26-236 |
| Cow position: | chr6:47171232-47171025 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 27-179 |
| Cow position: | chr6:28481481-28481337 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 27-190 |
| Cow position: | chr6:2618416-2618574 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 27-210 |
| Cow position: | chr6:6119836-6120018 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 27-210 |
| Cow position: | chr6:14897330-14897153 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-215 |
| Cow position: | chr6:7112785-7112969 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 57, 77 |
| Conread position: | 27-218 |
| Cow position: | chr6:7105378-7105568 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 165, 57 |
| Conread position: | 27-221 |
| Cow position: | chr6:9733820-9734008 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-231 |
| Cow position: | chr6:366035-365836 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-234 |
| Cow position: | chr6:50120776-50120981 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 27-234 |
| Cow position: | chr6:53462004-53462210 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 129, 67 |
| Conread position: | 27-235 |
| Cow position: | chr6:9738104-9738309 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 164, 51 |
| Conread position: | 27-235 |
| Cow position: | chr6:16699356-16699150 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 27-236 |
| Cow position: | chr6:50113834-50113633 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-236 |
| Cow position: | chr6:55041973-55042180 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-237 |
| Cow position: | chr6:16766690-16766898 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-238 |
| Cow position: | chr6:3573943-3573737 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-238 |
| Cow position: | chr6:12351982-12351769 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 193, 57 |
| Conread position: | 27-238 |
| Cow position: | chr6:14851596-14851805 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-238 |
| Cow position: | chr6:27761852-27761643 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 27-238 |
| Cow position: | chr6:50721248-50721039 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 27-238 |
| Cow position: | chr6:52249358-52249561 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 27-238 |
| Cow position: | chr6:59619226-59619015 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-238 |
| Cow position: | chr6:62577032-62577241 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 27-238 |
| Cow position: | chr6:66188650-66188859 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 27-239 |
| Cow position: | chr6:4680743-4680535 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 27-239 |
| Cow position: | chr6:27534653-27534864 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 27-239 |
| Cow position: | chr6:33983966-33983763 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 175, 57 |
| Conread position: | 27-239 |
| Cow position: | chr6:41414194-41414408 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-239 |
| Cow position: | chr6:63405960-63405750 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 149, 65 |
| Conread position: | 28-178 |
| Cow position: | chr6:59710879-59710731 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 28-227 |
| Cow position: | chr6:25357711-25357908 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 12, 57 |
| Conread position: | 28-234 |
| Cow position: | chr6:11193437-11193638 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 129, 66 |
| Conread position: | 28-235 |
| Cow position: | chr6:38438756-38438550 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 28-237 |
| Cow position: | chr6:67211437-67211646 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 57 |
| Conread position: | 28-238 |
| Cow position: | chr6:4388889-4388681 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 28-238 |
| Cow position: | chr6:56377742-56377953 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 61, 203 |
| Conread position: | 28-239 |
| Cow position: | chr6:8634155-8634360 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 192, 56 |
| Conread position: | 28-239 |
| Cow position: | chr6:33950010-33950212 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 31-239 |
| Cow position: | chr6:10611973-10611767 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 36-161 |
| Cow position: | chr6:13490860-13490983 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 36-193 |
| Cow position: | chr6:12926714-12926559 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 37-218 |
| Cow position: | chr6:65892730-65892908 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 37-239 |
| Cow position: | chr6:6595563-6595363 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 38-238 |
| Cow position: | chr6:45591687-45591489 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 40-239 |
| Cow position: | chr6:55474443-55474247 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 44-221 |
| Cow position: | chr6:42136122-42135947 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 45-238 |
| Cow position: | chr6:22679987-22679796 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.