Cow genome map

Conread name: rcmu39_j5.y1

Conread position: 1-201
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 92

Conread position: 1-235
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 103

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 8, 92

Conread position: 1-238
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 57

Conread position: 1-238
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 84

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 49

Conread position: 3-238
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 101

Conread position: 3-238
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 8, 101

Conread position: 4-209
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 25, 18

Conread position: 4-221
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 80

Conread position: 4-230
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 13

Conread position: 4-235
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 25, 18

Conread position: 4-236
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 25, 18

Conread position: 4-236
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 11, 92

Conread position: 4-237
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 12, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 12, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 13

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 70

Conread position: 4-238
Cow position:
Alignm length: 235
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 11, 95

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 18

Conread position: 6-163
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 97

Conread position: 6-165
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 97

Conread position: 6-189
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 86

Conread position: 6-203
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 80

Conread position: 6-220
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 97

Conread position: 6-234
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 104, 25

Conread position: 6-235
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 24, 100

Conread position: 6-235
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 78

Conread position: 6-236
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 79

Conread position: 6-236
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-236
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 84

Conread position: 6-236
Cow position:
Alignm length: 240
Alignm identity: 183
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 25, 48

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 21, 98

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 25, 96

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 18, 52

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 25, 96

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 25, 86

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 86

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 86

Conread position: 22-238
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 7, 74

Conread position: 26-231
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 69

Conread position: 27-192
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 27-201
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 27-222
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 111, 56

Conread position: 27-234
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 27-234
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 122, 67

Conread position: 27-234
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 112, 67

Conread position: 27-236
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 27-236
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 67, 0

Conread position: 27-236
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 27-237
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 57

Conread position: 27-237
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 197, 57

Conread position: 27-238
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 69, 111

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 111, 57

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 57

Conread position: 27-238
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 130, 57

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 27-239
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 100, 68

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 0

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 27-239
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 40, 50

Conread position: 28-237
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 28-238
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 54

Conread position: 28-238
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 11, 57

Conread position: 28-238
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 96, 56

Conread position: 34-238
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 34-239
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 61

Conread position: 36-226
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 0

Conread position: 36-236
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 102, 64

Conread position: 36-238
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 36-238
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 179, 57

Conread position: 37-190
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 39-238
Cow position:
Alignm length: 201
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 40

Conread position: 39-238
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.