Cow genome map

Conread name: rcmu39_j5.y1

Conread position: 1-229
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 150

Conread position: 1-231
Cow position:
Alignm length: 240
Alignm identity: 179
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 92

Conread position: 1-236
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 9, 99

Conread position: 1-236
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 54

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 6, 106

Conread position: 1-238
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 103

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 84

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 9, 102

Conread position: 1-238
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 102

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 28, 21

Conread position: 1-238
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 10, 91

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 96

Conread position: 2-208
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 27, 20

Conread position: 3-238
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 8, 101

Conread position: 3-238
Cow position:
Alignm length: 245
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 6, 90

Conread position: 3-239
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 6, 88

Conread position: 4-190
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 18

Conread position: 4-212
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 25, 18

Conread position: 4-218
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 92

Conread position: 4-221
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 92

Conread position: 4-236
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 0

Conread position: 4-236
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 4-238
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 74

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 19

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 82

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 18

Conread position: 4-239
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 95

Conread position: 5-238
Cow position:
Alignm length: 235
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 91

Conread position: 6-160
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 96

Conread position: 6-168
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 21, 97

Conread position: 6-173
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 97

Conread position: 6-178
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 169

Conread position: 6-178
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 97

Conread position: 6-178
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 86

Conread position: 6-205
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 97

Conread position: 6-234
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 25

Conread position: 6-236
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-236
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 79

Conread position: 6-238
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 96

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 23, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-239
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 101

Conread position: 6-239
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 25, 85

Conread position: 6-239
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 27, 80

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 96

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 27, 94

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 94

Conread position: 21-189
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 22-239
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 63

Conread position: 24-238
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 26-238
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 72, 0

Conread position: 27-179
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 27-179
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 67

Conread position: 27-190
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 57

Conread position: 27-191
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 27-216
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 50

Conread position: 27-231
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 101, 57

Conread position: 27-232
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 27-234
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 27-234
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 67

Conread position: 27-235
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 27-236
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 27-236
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 27-236
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 27-236
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 58

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 165, 57

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 115

Conread position: 27-238
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 126, 68

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 0

Conread position: 27-238
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 124, 64

Conread position: 27-238
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 57

Conread position: 27-239
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 167

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 27-239
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 128, 67

Conread position: 28-237
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 96, 66

Conread position: 28-237
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 7, 67

Conread position: 28-238
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 57

Conread position: 31-236
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 31-237
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 31-239
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 36-238
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 119, 58

Conread position: 39-178
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 43-238
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 102, 41

Show alignments to all cow chromosomes.