Cow genome map
| Conread name: | rcov18b_d8.y1 |
| Conread position: | 1-111 |
| Cow position: | chr3:5451358-5451470 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-111 |
| Cow position: | chr3:19115641-19115529 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-121 |
| Cow position: | chr3:22665488-22665365 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-122 |
| Cow position: | chr3:2445988-2445865 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-122 |
| Cow position: | chr3:7530508-7530632 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:1466089-1466213 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:2470061-2469937 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:6046907-6047031 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:7020597-7020474 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:7864291-7864167 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:7866041-7866165 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:8810079-8810203 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:11713217-11713341 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:14729004-14728882 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 1-123 |
| Cow position: | chr3:15056960-15057083 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 1-123 |
| Cow position: | chr3:22885480-22885357 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 1-123 |
| Cow position: | chr3:24769183-24769306 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 1-123 |
| Cow position: | chr3:24812315-24812439 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:25086258-25086375 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 1-123 |
| Cow position: | chr3:25718485-25718608 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 1-123 |
| Cow position: | chr3:26611711-26611831 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 1-123 |
| Cow position: | chr3:27866118-27866242 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:29708365-29708241 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:38280612-38280488 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:38529743-38529619 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:45835115-45835239 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:45840344-45840466 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 1-123 |
| Cow position: | chr3:52683343-52683467 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:52711337-52711213 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:57722686-57722809 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 12, 67 |
| Conread position: | 1-123 |
| Cow position: | chr3:62737372-62737496 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:64509436-64509560 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:74477044-74477168 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:76509748-76509624 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:78501823-78501947 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:80441005-80440881 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-123 |
| Cow position: | chr3:81350086-81350210 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-124 |
| Cow position: | chr3:81827673-81827550 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 78 |
| Conread position: | 1-126 |
| Cow position: | chr3:69037027-69037154 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 2-121 |
| Cow position: | chr3:8008739-8008859 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 2-123 |
| Cow position: | chr3:10131912-10132035 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-121 |
| Cow position: | chr3:13009476-13009356 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-123 |
| Cow position: | chr3:19474659-19474781 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-123 |
| Cow position: | chr3:30766574-30766453 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 3-123 |
| Cow position: | chr3:35249239-35249116 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-123 |
| Cow position: | chr3:51796092-51795969 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-123 |
| Cow position: | chr3:55263742-55263864 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 12-122 |
| Cow position: | chr3:78788951-78788840 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 12-123 |
| Cow position: | chr3:5452306-5452417 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 12-125 |
| Cow position: | chr3:64111479-64111593 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 14-123 |
| Cow position: | chr3:11243761-11243871 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.