Cow genome map
| Conread name: | rcov18b_d8.y1 | 
| Conread position: | 1-120 | 
| Cow position: | chr6:26939675-26939798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-120 | 
| Cow position: | chr6:36923312-36923191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-120 | 
| Cow position: | chr6:36924165-36924286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-121 | 
| Cow position: | chr6:44691546-44691668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-122 | 
| Cow position: | chr6:61409320-61409197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:104396-104272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:2597599-2597717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 12, 23 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:2982372-2982496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:3661207-3661331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:5074800-5074923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 13, 69 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:7870908-7870784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:19042081-19041957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:19261426-19261297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:23212776-23212900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:23898373-23898249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:23904549-23904425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:36674982-36675106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:44460125-44460002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 12, 26 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:48025535-48025411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:48724398-48724522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:49411894-49411770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:49756686-49756809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 12, 102 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:50350493-50350369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:52962090-52961971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 12, 25 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:57793912-57793788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:60866054-60865930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:65680084-65680207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 12, 90 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:66256082-66256202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 13, 32 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:67428717-67428838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 12, 31 | 
| Conread position: | 1-128 | 
| Cow position: | chr6:54538804-54538676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 12, 95 | 
| Conread position: | 2-123 | 
| Cow position: | chr6:32522057-32521934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 2-123 | 
| Cow position: | chr6:46533185-46533307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 11, 23 | 
| Conread position: | 2-123 | 
| Cow position: | chr6:53430808-53430686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 11, 88 | 
| Conread position: | 2-123 | 
| Cow position: | chr6:61434927-61434803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 4-127 | 
| Cow position: | chr6:63766826-63766704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 41, 81 | 
| Conread position: | 5-123 | 
| Cow position: | chr6:52418714-52418833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 5-123 | 
| Cow position: | chr6:59689241-59689360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 12-123 | 
| Cow position: | chr6:15236540-15236428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 33, 0 | 
Show alignments to all cow chromosomes.
