Cow genome map
| Conread name: | rcsk07_i5.y1 |
| Conread position: | 1-205 |
| Cow position: | chr1:24558680-24558879 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 1-211 |
| Cow position: | chr1:6305095-6304886 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 131, 16 |
| Conread position: | 1-211 |
| Cow position: | chr1:57247209-57247409 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-219 |
| Cow position: | chr1:11853919-11853701 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 151 |
| Conread position: | 1-220 |
| Cow position: | chr1:80869878-80870101 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 98, 154 |
| Conread position: | 1-323 |
| Cow position: | chr1:76096211-76096528 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 230, 69 |
| Conread position: | 1-324 |
| Cow position: | chr1:82378566-82378882 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 216, 79 |
| Conread position: | 2-205 |
| Cow position: | chr1:86614634-86614831 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 2-209 |
| Cow position: | chr1:14528427-14528220 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 205, 137 |
| Conread position: | 2-305 |
| Cow position: | chr1:82884617-82884321 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 262, 76 |
| Conread position: | 3-162 |
| Cow position: | chr1:25856465-25856614 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-187 |
| Cow position: | chr1:86325837-86325655 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 3-192 |
| Cow position: | chr1:61661533-61661338 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 136, 43 |
| Conread position: | 3-192 |
| Cow position: | chr1:89395366-89395559 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 129, 122 |
| Conread position: | 3-193 |
| Cow position: | chr1:58889523-58889336 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 3-198 |
| Cow position: | chr1:20799646-20799849 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 3-198 |
| Cow position: | chr1:57900967-57900776 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 3-199 |
| Cow position: | chr1:82370525-82370705 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 3-199 |
| Cow position: | chr1:90864526-90864328 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 130, 150 |
| Conread position: | 3-199 |
| Cow position: | chr1:99136656-99136466 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-201 |
| Cow position: | chr1:4385122-4385328 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 3-202 |
| Cow position: | chr1:100512369-100512567 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 88 |
| Conread position: | 3-205 |
| Cow position: | chr1:41004593-41004392 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 3-205 |
| Cow position: | chr1:54163036-54162836 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-205 |
| Cow position: | chr1:67821436-67821240 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-205 |
| Cow position: | chr1:76850950-76850755 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 126, 41 |
| Conread position: | 3-207 |
| Cow position: | chr1:4293836-4294028 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 3-207 |
| Cow position: | chr1:36874789-36874986 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-207 |
| Cow position: | chr1:75967210-75967404 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 3-208 |
| Cow position: | chr1:15333655-15333858 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 139, 6 |
| Conread position: | 3-208 |
| Cow position: | chr1:72035155-72034950 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 121, 30 |
| Conread position: | 3-208 |
| Cow position: | chr1:81563507-81563710 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-209 |
| Cow position: | chr1:5873198-5872997 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 124, 88 |
| Conread position: | 3-209 |
| Cow position: | chr1:16973065-16972867 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-209 |
| Cow position: | chr1:31399452-31399250 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 184, 122 |
| Conread position: | 3-209 |
| Cow position: | chr1:49131348-49131141 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 3-209 |
| Cow position: | chr1:57575994-57575786 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 67, 152 |
| Conread position: | 3-210 |
| Cow position: | chr1:9444076-9443873 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 3-210 |
| Cow position: | chr1:51836345-51836546 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-210 |
| Cow position: | chr1:53423452-53423659 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 131, 148 |
| Conread position: | 3-210 |
| Cow position: | chr1:63905700-63905497 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 3-210 |
| Cow position: | chr1:78857549-78857345 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 200, 67 |
| Conread position: | 3-210 |
| Cow position: | chr1:87888176-87888376 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 128, 103 |
| Conread position: | 3-210 |
| Cow position: | chr1:101812501-101812300 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 126, 33 |
| Conread position: | 3-211 |
| Cow position: | chr1:11770520-11770315 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 130, 70 |
| Conread position: | 3-211 |
| Cow position: | chr1:12596127-12595927 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-211 |
| Cow position: | chr1:20287888-20288096 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 204, 147 |
| Conread position: | 3-211 |
| Cow position: | chr1:22448813-22448610 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 3-211 |
| Cow position: | chr1:25886301-25886102 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 3-211 |
| Cow position: | chr1:51628728-51628522 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-211 |
| Cow position: | chr1:82861548-82861759 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 125, 150 |
| Conread position: | 3-212 |
| Cow position: | chr1:22728821-22729029 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 3-212 |
| Cow position: | chr1:84239333-84239135 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 3-212 |
| Cow position: | chr1:91142383-91142178 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 136, 93 |
| Conread position: | 3-212 |
| Cow position: | chr1:97620067-97619858 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 204, 147 |
| Conread position: | 3-213 |
| Cow position: | chr1:56408387-56408596 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 3-213 |
| Cow position: | chr1:98613015-98613213 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 3-215 |
| Cow position: | chr1:3323632-3323847 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 146, 61 |
| Conread position: | 3-215 |
| Cow position: | chr1:6881450-6881245 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 3-215 |
| Cow position: | chr1:28567666-28567453 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 142 |
| Conread position: | 3-215 |
| Cow position: | chr1:29671750-29671543 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 92, 88 |
| Conread position: | 3-215 |
| Cow position: | chr1:34000679-34000895 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 123, 150 |
| Conread position: | 3-215 |
| Cow position: | chr1:41696828-41697038 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 3-215 |
| Cow position: | chr1:51769859-51770070 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 121, 43 |
| Conread position: | 3-215 |
| Cow position: | chr1:70282709-70282916 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3-215 |
| Cow position: | chr1:100551744-100551949 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 130, 62 |
| Conread position: | 3-218 |
| Cow position: | chr1:26200994-26201205 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 205, 75 |
| Conread position: | 3-220 |
| Cow position: | chr1:33811708-33811914 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 208, 48 |
| Conread position: | 3-222 |
| Cow position: | chr1:20422433-20422216 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 3-232 |
| Cow position: | chr1:78750919-78750690 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 3-248 |
| Cow position: | chr1:73522370-73522138 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-251 |
| Cow position: | chr1:50634632-50634385 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 3-255 |
| Cow position: | chr1:47008804-47009049 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 3-261 |
| Cow position: | chr1:56748363-56748625 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 126, 148 |
| Conread position: | 3-262 |
| Cow position: | chr1:81913378-81913126 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 209, 122 |
| Conread position: | 3-277 |
| Cow position: | chr1:37322231-37321955 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 3-277 |
| Cow position: | chr1:57635240-57635505 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 244, 75 |
| Conread position: | 3-278 |
| Cow position: | chr1:55705480-55705206 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 219, 148 |
| Conread position: | 3-280 |
| Cow position: | chr1:48105660-48105385 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 209, 87 |
| Conread position: | 3-280 |
| Cow position: | chr1:60907135-60907423 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 152 |
| Conread position: | 3-281 |
| Cow position: | chr1:80899881-80900167 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 115, 158 |
| Conread position: | 3-282 |
| Cow position: | chr1:10655251-10655530 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 124, 150 |
| Conread position: | 3-282 |
| Cow position: | chr1:61564566-61564841 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 257, 152 |
| Conread position: | 3-283 |
| Cow position: | chr1:35170110-35170383 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 3-283 |
| Cow position: | chr1:77620324-77620595 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 247, 48 |
| Conread position: | 3-283 |
| Cow position: | chr1:78809657-78809925 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-283 |
| Cow position: | chr1:89742238-89741951 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 159 |
| Conread position: | 3-284 |
| Cow position: | chr1:45535476-45535757 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 250, 14 |
| Conread position: | 3-284 |
| Cow position: | chr1:57264213-57263946 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 244, 73 |
| Conread position: | 3-284 |
| Cow position: | chr1:71045528-71045805 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 237, 90 |
| Conread position: | 3-285 |
| Cow position: | chr1:8869890-8869608 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 3-286 |
| Cow position: | chr1:53039925-53039649 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 244, 22 |
| Conread position: | 3-292 |
| Cow position: | chr1:31871194-31871483 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 213, 224 |
| Conread position: | 3-297 |
| Cow position: | chr1:54199609-54199316 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 3-298 |
| Cow position: | chr1:32341434-32341145 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 247, 65 |
| Conread position: | 3-298 |
| Cow position: | chr1:79590874-79591162 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 125, 150 |
| Conread position: | 3-298 |
| Cow position: | chr1:102647495-102647209 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 124, 73 |
| Conread position: | 3-304 |
| Cow position: | chr1:4290932-4291234 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 120, 60 |
| Conread position: | 3-304 |
| Cow position: | chr1:6941239-6941538 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 251, 88 |
| Conread position: | 3-304 |
| Cow position: | chr1:6958652-6958951 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 251, 88 |
| Conread position: | 3-304 |
| Cow position: | chr1:52052930-52052647 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 244, 65 |
| Conread position: | 3-304 |
| Cow position: | chr1:54478098-54478399 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 209, 67 |
| Conread position: | 3-304 |
| Cow position: | chr1:68619162-68618861 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 130, 25 |
| Conread position: | 3-304 |
| Cow position: | chr1:78791532-78791234 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 247, 69 |
| Conread position: | 3-304 |
| Cow position: | chr1:96964094-96964386 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 124, 75 |
| Conread position: | 3-305 |
| Cow position: | chr1:79278668-79278376 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 209, 30 |
| Conread position: | 3-306 |
| Cow position: | chr1:21934398-21934101 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 126, 71 |
| Conread position: | 3-308 |
| Cow position: | chr1:70538377-70538686 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 244, 152 |
| Conread position: | 3-309 |
| Cow position: | chr1:28284348-28284651 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 73 |
| Conread position: | 3-312 |
| Cow position: | chr1:82406779-82406472 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 213, 65 |
| Conread position: | 3-319 |
| Cow position: | chr1:63391000-63390681 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 143, 86 |
| Conread position: | 3-321 |
| Cow position: | chr1:51981001-51981310 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 248, 122 |
| Conread position: | 3-321 |
| Cow position: | chr1:78091810-78092125 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 147, 71 |
| Conread position: | 3-321 |
| Cow position: | chr1:91817000-91816683 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 242, 122 |
| Conread position: | 3-321 |
| Cow position: | chr1:92370587-92370281 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 261, 30 |
| Conread position: | 3-321 |
| Cow position: | chr1:96478469-96478788 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 125, 76 |
| Conread position: | 3-322 |
| Cow position: | chr1:6795162-6794837 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 230 |
| Conread position: | 3-322 |
| Cow position: | chr1:85596718-85597027 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 56 |
| Conread position: | 3-323 |
| Cow position: | chr1:29916188-29916504 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 108, 38 |
| Conread position: | 3-323 |
| Cow position: | chr1:31190330-31190021 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 247, 24 |
| Conread position: | 3-323 |
| Cow position: | chr1:62732349-62732662 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 3-323 |
| Cow position: | chr1:92642668-92642359 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 125, 24 |
| Conread position: | 3-324 |
| Cow position: | chr1:19465836-19466144 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 235, 67 |
| Conread position: | 3-324 |
| Cow position: | chr1:22777777-22777453 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 3-324 |
| Cow position: | chr1:43505297-43505620 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 197, 66 |
| Conread position: | 3-324 |
| Cow position: | chr1:44506742-44507064 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 128, 25 |
| Conread position: | 3-324 |
| Cow position: | chr1:56477368-56477683 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 211, 66 |
| Conread position: | 3-324 |
| Cow position: | chr1:56634872-56635189 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 244, 91 |
| Conread position: | 3-324 |
| Cow position: | chr1:68827132-68826821 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 130, 77 |
| Conread position: | 3-324 |
| Cow position: | chr1:70534160-70533848 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 207, 75 |
| Conread position: | 3-324 |
| Cow position: | chr1:75744634-75744953 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 257, 77 |
| Conread position: | 3-324 |
| Cow position: | chr1:77118753-77118443 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 203, 35 |
| Conread position: | 3-324 |
| Cow position: | chr1:81355930-81355612 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 242, 75 |
| Conread position: | 3-324 |
| Cow position: | chr1:89510159-89509830 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 142 |
| Conread position: | 3-324 |
| Cow position: | chr1:90423312-90422992 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 128 |
| Conread position: | 3-324 |
| Cow position: | chr1:98551487-98551811 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 213, 41 |
| Conread position: | 3-324 |
| Cow position: | chr1:100705906-100706217 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 143, 58 |
| Conread position: | 3-325 |
| Cow position: | chr1:4374565-4374245 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 126, 75 |
| Conread position: | 3-327 |
| Cow position: | chr1:4032408-4032726 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 143, 62 |
| Conread position: | 3-327 |
| Cow position: | chr1:7143075-7142757 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 247, 69 |
| Conread position: | 3-327 |
| Cow position: | chr1:10942318-10942001 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 247, 77 |
| Conread position: | 3-327 |
| Cow position: | chr1:10964068-10964385 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 247, 77 |
| Conread position: | 3-327 |
| Cow position: | chr1:11914104-11913784 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 126, 87 |
| Conread position: | 3-327 |
| Cow position: | chr1:25793667-25793346 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 151 |
| Conread position: | 3-327 |
| Cow position: | chr1:54258341-54258660 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 121, 73 |
| Conread position: | 3-327 |
| Cow position: | chr1:55146575-55146892 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 259, 107 |
| Conread position: | 3-327 |
| Cow position: | chr1:55357512-55357201 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 122, 75 |
| Conread position: | 3-327 |
| Cow position: | chr1:61392018-61391695 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 207, 38 |
| Conread position: | 3-327 |
| Cow position: | chr1:95215412-95215096 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 130, 149 |
| Conread position: | 3-328 |
| Cow position: | chr1:3657593-3657271 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 3-328 |
| Cow position: | chr1:5162279-5161959 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 56 |
| Conread position: | 3-328 |
| Cow position: | chr1:6939865-6939541 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 124, 40 |
| Conread position: | 3-328 |
| Cow position: | chr1:7657539-7657219 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 202, 135 |
| Conread position: | 3-328 |
| Cow position: | chr1:26688705-26688378 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 66 |
| Conread position: | 3-328 |
| Cow position: | chr1:31390812-31390493 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 3-328 |
| Cow position: | chr1:56643815-56643510 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-328 |
| Cow position: | chr1:57119569-57119253 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 258, 92 |
| Conread position: | 3-328 |
| Cow position: | chr1:59650040-59650365 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 136, 41 |
| Conread position: | 3-328 |
| Cow position: | chr1:63504112-63504428 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 201, 30 |
| Conread position: | 3-328 |
| Cow position: | chr1:66355935-66355620 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 203, 71 |
| Conread position: | 3-328 |
| Cow position: | chr1:71135926-71136247 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 3-328 |
| Cow position: | chr1:75443643-75443337 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-328 |
| Cow position: | chr1:80764761-80764441 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 247, 75 |
| Conread position: | 3-328 |
| Cow position: | chr1:82338010-82337685 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 208, 35 |
| Conread position: | 3-328 |
| Cow position: | chr1:92010087-92010406 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 235, 178 |
| Conread position: | 3-328 |
| Cow position: | chr1:95765315-95764998 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 122 |
| Conread position: | 4-176 |
| Cow position: | chr1:18937059-18936887 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 121, 147 |
| Conread position: | 4-189 |
| Cow position: | chr1:75382766-75382949 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 4-210 |
| Cow position: | chr1:97785958-97786156 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 137, 66 |
| Conread position: | 4-215 |
| Cow position: | chr1:666135-666344 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 87 |
| Conread position: | 4-215 |
| Cow position: | chr1:44164853-44165063 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 4-215 |
| Cow position: | chr1:95499721-95499513 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 4-237 |
| Cow position: | chr1:3035218-3034993 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 196, 70 |
| Conread position: | 4-257 |
| Cow position: | chr1:71946596-71946350 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 204, 61 |
| Conread position: | 4-270 |
| Cow position: | chr1:89342218-89341953 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 204, 86 |
| Conread position: | 4-282 |
| Cow position: | chr1:68951406-68951675 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 239, 66 |
| Conread position: | 4-288 |
| Cow position: | chr1:68217584-68217307 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 238, 74 |
| Conread position: | 4-321 |
| Cow position: | chr1:85361630-85361939 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 142, 121 |
| Conread position: | 4-324 |
| Cow position: | chr1:80988121-80988438 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 196, 64 |
| Conread position: | 4-325 |
| Cow position: | chr1:99807948-99807624 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 9 |
| Conread position: | 4-328 |
| Cow position: | chr1:41735850-41735525 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 203, 121 |
| Conread position: | 4-328 |
| Cow position: | chr1:64189277-64189595 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 4-328 |
| Cow position: | chr1:69415943-69415616 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 316 |
| Conread position: | 5-209 |
| Cow position: | chr1:15311644-15311844 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 128, 89 |
| Conread position: | 5-210 |
| Cow position: | chr1:96472205-96472423 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 157 |
| Conread position: | 5-221 |
| Cow position: | chr1:81277426-81277215 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 123, 58 |
| Conread position: | 5-273 |
| Cow position: | chr1:43839303-43839568 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 245, 71 |
| Conread position: | 5-283 |
| Cow position: | chr1:45289097-45288822 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 5-304 |
| Cow position: | chr1:81613161-81613459 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 242, 145 |
| Conread position: | 5-312 |
| Cow position: | chr1:92551358-92551067 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 5-324 |
| Cow position: | chr1:39069175-39068865 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 242, 71 |
| Conread position: | 5-328 |
| Cow position: | chr1:2765192-2765508 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 206, 41 |
| Conread position: | 5-328 |
| Cow position: | chr1:80973838-80973513 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 127, 73 |
| Conread position: | 5-328 |
| Cow position: | chr1:81301319-81300996 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 6-198 |
| Cow position: | chr1:70236515-70236324 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 120, 42 |
| Conread position: | 6-328 |
| Cow position: | chr1:97622421-97622126 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 7-312 |
| Cow position: | chr1:46839372-46839682 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 122, 281 |
| Conread position: | 7-324 |
| Cow position: | chr1:21678920-21679248 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 7-324 |
| Cow position: | chr1:21787104-21787427 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 202, 143 |
| Conread position: | 10-183 |
| Cow position: | chr1:14981338-14981172 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 10-205 |
| Cow position: | chr1:84255535-84255734 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 117, 150 |
| Conread position: | 10-323 |
| Cow position: | chr1:23099679-23099993 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 10-327 |
| Cow position: | chr1:10719704-10719386 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 66 |
| Conread position: | 11-322 |
| Cow position: | chr1:100741074-100741367 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 295, 16 |
| Conread position: | 13-214 |
| Cow position: | chr1:64939159-64938964 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 13-227 |
| Cow position: | chr1:20521899-20521697 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 200, 48 |
| Conread position: | 13-319 |
| Cow position: | chr1:15691121-15691420 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 237, 56 |
| Conread position: | 13-328 |
| Cow position: | chr1:16572841-16572527 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 177 |
| Conread position: | 14-328 |
| Cow position: | chr1:30413372-30413685 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 14-328 |
| Cow position: | chr1:102313082-102312779 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 114 |
| Conread position: | 17-205 |
| Cow position: | chr1:68818010-68817828 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 17-211 |
| Cow position: | chr1:14379742-14379559 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 17-211 |
| Cow position: | chr1:55135621-55135808 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 17-283 |
| Cow position: | chr1:69695221-69694944 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 209 |
| Conread position: | 17-323 |
| Cow position: | chr1:29975810-29975510 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 237, 69 |
| Conread position: | 17-324 |
| Cow position: | chr1:16962226-16961919 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 116, 134 |
| Conread position: | 17-324 |
| Cow position: | chr1:74956236-74955930 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 17-324 |
| Cow position: | chr1:98030702-98031014 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 17-326 |
| Cow position: | chr1:71079169-71078867 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 211, 78 |
| Conread position: | 17-327 |
| Cow position: | chr1:26702420-26702113 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 94, 56 |
| Conread position: | 17-327 |
| Cow position: | chr1:68845698-68845396 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 112, 73 |
| Conread position: | 17-328 |
| Cow position: | chr1:49433477-49433169 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 110, 81 |
| Conread position: | 18-323 |
| Cow position: | chr1:43872543-43872230 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 196, 14 |
| Conread position: | 18-327 |
| Cow position: | chr1:93110833-93110521 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 196, 55 |
| Conread position: | 18-328 |
| Cow position: | chr1:84015660-84015966 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 110, 224 |
| Conread position: | 19-203 |
| Cow position: | chr1:94404006-94404182 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 180, 55 |
| Conread position: | 19-205 |
| Cow position: | chr1:85651971-85651798 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 169, 84 |
| Conread position: | 20-199 |
| Cow position: | chr1:17291853-17291679 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 59 |
| Conread position: | 20-304 |
| Cow position: | chr1:31348650-31348367 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 109, 50 |
| Conread position: | 21-328 |
| Cow position: | chr1:58825340-58825636 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 186, 51 |
| Conread position: | 22-283 |
| Cow position: | chr1:98310854-98311119 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 96, 131 |
| Conread position: | 22-324 |
| Cow position: | chr1:18224086-18223778 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 176, 68 |
| Conread position: | 24-210 |
| Cow position: | chr1:4414413-4414232 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 30-208 |
| Cow position: | chr1:81470929-81471106 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 30-277 |
| Cow position: | chr1:33331288-33331048 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 169, 108 |
| Conread position: | 36-198 |
| Cow position: | chr1:83594001-83593839 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 89, 29 |
| Conread position: | 36-324 |
| Cow position: | chr1:45555170-45555457 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 211, 58 |
| Conread position: | 37-194 |
| Cow position: | chr1:82865038-82865193 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 37-199 |
| Cow position: | chr1:77383568-77383731 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 132 |
| Conread position: | 37-235 |
| Cow position: | chr1:24542774-24542583 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 37-279 |
| Cow position: | chr1:82443649-82443409 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 37-285 |
| Cow position: | chr1:32244597-32244348 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 181, 233 |
| Conread position: | 37-304 |
| Cow position: | chr1:51654218-51654494 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 86, 37 |
| Conread position: | 37-305 |
| Cow position: | chr1:70026534-70026274 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 173, 24 |
| Conread position: | 37-328 |
| Cow position: | chr1:89443669-89443384 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 209, 43 |
| Conread position: | 38-194 |
| Cow position: | chr1:24413248-24413405 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 38-215 |
| Cow position: | chr1:13810457-13810630 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 38-323 |
| Cow position: | chr1:69004201-69004483 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 91, 134 |
| Conread position: | 38-328 |
| Cow position: | chr1:42174780-42174493 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 184, 41 |
| Conread position: | 40-282 |
| Cow position: | chr1:92369539-92369786 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 171, 110 |
| Conread position: | 40-328 |
| Cow position: | chr1:89548000-89548283 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 43-215 |
| Cow position: | chr1:89082921-89083093 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 153, 42 |
| Conread position: | 43-304 |
| Cow position: | chr1:42398383-42398121 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 46-327 |
| Cow position: | chr1:75933089-75933360 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 260, 36 |
| Conread position: | 46-328 |
| Cow position: | chr1:74947310-74947023 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 110 |
| Conread position: | 47-282 |
| Cow position: | chr1:24445811-24445580 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 200, 23 |
| Conread position: | 47-319 |
| Cow position: | chr1:39025852-39026124 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 47-324 |
| Cow position: | chr1:24188050-24188314 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 80, 31 |
| Conread position: | 50-203 |
| Cow position: | chr1:91875091-91874939 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 50-323 |
| Cow position: | chr1:13195604-13195341 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 157, 106 |
| Conread position: | 51-206 |
| Cow position: | chr1:20667920-20667770 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 27 |
| Conread position: | 51-284 |
| Cow position: | chr1:84235509-84235285 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 51-324 |
| Cow position: | chr1:50345364-50345636 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 199, 90 |
| Conread position: | 52-327 |
| Cow position: | chr1:73196413-73196135 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 52-328 |
| Cow position: | chr1:60532365-60532632 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 155, 136 |
| Conread position: | 53-323 |
| Cow position: | chr1:60281190-60281463 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 194, 97 |
| Conread position: | 60-249 |
| Cow position: | chr1:38525417-38525602 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 69, 82 |
| Conread position: | 61-281 |
| Cow position: | chr1:20544123-20544344 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 185, 64 |
| Conread position: | 61-324 |
| Cow position: | chr1:57782841-57783095 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 151, 19 |
| Conread position: | 61-327 |
| Cow position: | chr1:101632507-101632243 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 186, 25 |
| Conread position: | 64-324 |
| Cow position: | chr1:75347451-75347715 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 65-227 |
| Cow position: | chr1:87095399-87095237 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 86 |
| Conread position: | 65-327 |
| Cow position: | chr1:90413211-90413469 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 34, 38 |
| Conread position: | 68-286 |
| Cow position: | chr1:86110897-86110685 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 69-210 |
| Cow position: | chr1:52449773-52449631 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 69-277 |
| Cow position: | chr1:68763846-68763642 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 181, 64 |
| Conread position: | 69-304 |
| Cow position: | chr1:42175560-42175797 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 154, 86 |
| Conread position: | 70-327 |
| Cow position: | chr1:77683194-77683446 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 194, 80 |
| Conread position: | 71-322 |
| Cow position: | chr1:14309200-14308943 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 72-262 |
| Cow position: | chr1:51684642-51684832 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 73-304 |
| Cow position: | chr1:85647942-85647710 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 174, 77 |
| Conread position: | 74-324 |
| Cow position: | chr1:88913158-88913410 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 78-328 |
| Cow position: | chr1:101771753-101771994 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 79-323 |
| Cow position: | chr1:51904479-51904248 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 171, 17 |
| Conread position: | 80-256 |
| Cow position: | chr1:1403632-1403462 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 167, 57 |
| Conread position: | 80-324 |
| Cow position: | chr1:41115868-41115628 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 167, 71 |
| Conread position: | 80-324 |
| Cow position: | chr1:43703254-43703500 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 167, 70 |
| Conread position: | 82-221 |
| Cow position: | chr1:65909375-65909514 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 82-328 |
| Cow position: | chr1:46205666-46205905 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 82-328 |
| Cow position: | chr1:63314677-63314925 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 128, 148 |
| Conread position: | 84-324 |
| Cow position: | chr1:24778134-24777903 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 33 |
| Conread position: | 90-319 |
| Cow position: | chr1:38692520-38692752 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 115, 159 |
| Conread position: | 90-321 |
| Cow position: | chr1:91023611-91023379 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 157, 60 |
| Conread position: | 91-319 |
| Cow position: | chr1:6734322-6734540 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 91-328 |
| Cow position: | chr1:50045657-50045895 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 159, 127 |
| Conread position: | 96-323 |
| Cow position: | chr1:22525741-22525968 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 97-327 |
| Cow position: | chr1:72731902-72732135 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 97-328 |
| Cow position: | chr1:85141868-85141640 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 153, 120 |
| Conread position: | 100-324 |
| Cow position: | chr1:89349829-89350056 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 107-323 |
| Cow position: | chr1:44746739-44746952 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 144, 49 |
| Conread position: | 110-328 |
| Cow position: | chr1:63038118-63038339 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 125-322 |
| Cow position: | chr1:73653751-73653554 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 125-323 |
| Cow position: | chr1:26427970-26427771 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 25 |
| Conread position: | 141-328 |
| Cow position: | chr1:15902398-15902589 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 82 |
| Conread position: | 146-328 |
| Cow position: | chr1:30066529-30066715 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 40 |
Show alignments to all cow chromosomes.