Cow genome map

Conread name: rcsk07_i5.y1

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 127, 138

Conread position: 1-312
Cow position:
Alignm length: 316
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 61

Conread position: 1-328
Cow position:
Alignm length: 332
Alignm identity: 214
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 153, 8

Conread position: 2-328
Cow position:
Alignm length: 333
Alignm identity: 216
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 17

Conread position: 3-168
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 3-181
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 3-187
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 30

Conread position: 3-187
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 3-188
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 3-192
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 3-198
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 97

Conread position: 3-208
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 124, 104

Conread position: 3-209
Cow position:
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 3-209
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 153

Conread position: 3-209
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 117

Conread position: 3-210
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 147, 8

Conread position: 3-210
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 97, 0

Conread position: 3-211
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 60, 10

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 99

Conread position: 3-212
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 3-212
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 147, 0

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 7, 15

Conread position: 3-215
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 130, 75

Conread position: 3-227
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 159, 23

Conread position: 3-237
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 3-248
Cow position:
Alignm length: 252
Alignm identity: 172
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 52, 41

Conread position: 3-248
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 202, 52

Conread position: 3-260
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 244, 93

Conread position: 3-262
Cow position:
Alignm length: 262
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 244, 43

Conread position: 3-273
Cow position:
Alignm length: 277
Alignm identity: 194
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 8, 82

Conread position: 3-277
Cow position:
Alignm length: 289
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 80

Conread position: 3-282
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 244, 71

Conread position: 3-282
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 244, 55

Conread position: 3-282
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 244, 24

Conread position: 3-301
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 227, 122

Conread position: 3-304
Cow position:
Alignm length: 311
Alignm identity: 208
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 136, 62

Conread position: 3-304
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 229, 14

Conread position: 3-304
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 244, 97

Conread position: 3-304
Cow position:
Alignm length: 313
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 204, 106

Conread position: 3-310
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 95, 69

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 303, 68

Conread position: 3-322
Cow position:
Alignm length: 323
Alignm identity: 220
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 159, 67

Conread position: 3-322
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 85

Conread position: 3-323
Cow position:
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 71

Conread position: 3-323
Cow position:
Alignm length: 328
Alignm identity: 210
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 76

Conread position: 3-324
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 244, 88

Conread position: 3-324
Cow position:
Alignm length: 328
Alignm identity: 214
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 244, 146

Conread position: 3-324
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 187

Conread position: 3-324
Cow position:
Alignm length: 326
Alignm identity: 214
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 98

Conread position: 3-324
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 244, 147

Conread position: 3-327
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 3-327
Cow position:
Alignm length: 335
Alignm identity: 221
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 70

Conread position: 3-327
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 3-327
Cow position:
Alignm length: 329
Alignm identity: 223
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 244, 64

Conread position: 3-327
Cow position:
Alignm length: 326
Alignm identity: 217
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 303, 142

Conread position: 3-328
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 60, 76

Conread position: 3-328
Cow position:
Alignm length: 329
Alignm identity: 222
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 60

Conread position: 3-328
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 3-328
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 60

Conread position: 3-328
Cow position:
Alignm length: 330
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 85

Conread position: 3-328
Cow position:
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 75

Conread position: 3-328
Cow position:
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 122

Conread position: 3-328
Cow position:
Alignm length: 341
Alignm identity: 223
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 222

Conread position: 3-328
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 136

Conread position: 3-328
Cow position:
Alignm length: 327
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 239, 111

Conread position: 3-328
Cow position:
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 24

Conread position: 4-186
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 4-202
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 158

Conread position: 4-303
Cow position:
Alignm length: 306
Alignm identity: 196
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 25

Conread position: 4-324
Cow position:
Alignm length: 332
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 137, 245

Conread position: 4-328
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 259, 66

Conread position: 5-323
Cow position:
Alignm length: 323
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 242, 31

Conread position: 5-328
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 118, 41

Conread position: 6-303
Cow position:
Alignm length: 303
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 244, 119

Conread position: 7-313
Cow position:
Alignm length: 310
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 15

Conread position: 13-286
Cow position:
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 87

Conread position: 17-191
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 112, 131

Conread position: 17-205
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 136

Conread position: 17-210
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 137

Conread position: 17-210
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 112, 135

Conread position: 17-215
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 132

Conread position: 17-232
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 78

Conread position: 17-276
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 240, 41

Conread position: 17-292
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 78

Conread position: 17-324
Cow position:
Alignm length: 317
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 67

Conread position: 18-324
Cow position:
Alignm length: 319
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 107, 18

Conread position: 20-282
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 216, 130

Conread position: 20-328
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 21-327
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 113, 25

Conread position: 35-321
Cow position:
Alignm length: 301
Alignm identity: 205
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 50, 41

Conread position: 37-205
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 116

Conread position: 37-274
Cow position:
Alignm length: 243
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 210, 37

Conread position: 40-324
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 207, 72

Conread position: 41-193
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 43-324
Cow position:
Alignm length: 290
Alignm identity: 200
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 168, 48

Conread position: 46-212
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 46-319
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 87, 105

Conread position: 46-328
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 106, 10

Conread position: 51-220
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 51-327
Cow position:
Alignm length: 290
Alignm identity: 188
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 229

Conread position: 52-265
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 9

Conread position: 52-324
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 195, 22

Conread position: 52-324
Cow position:
Alignm length: 280
Alignm identity: 198
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 198, 137

Conread position: 53-209
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 25

Conread position: 55-215
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 39

Conread position: 55-324
Cow position:
Alignm length: 276
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 192, 100

Conread position: 62-188
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 89

Conread position: 63-210
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 38

Conread position: 69-304
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 138, 70

Conread position: 74-328
Cow position:
Alignm length: 261
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 173, 76

Conread position: 107-323
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 42

Conread position: 113-324
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 137, 12

Show alignments to all cow chromosomes.