Cow genome map
| Conread name: | rcsk07_i5.y1 |
| Conread position: | 1-199 |
| Cow position: | chr18:5570885-5571084 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 1-209 |
| Cow position: | chr18:4316040-4316246 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 1-221 |
| Cow position: | chr18:39875525-39875311 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-324 |
| Cow position: | chr18:16726379-16726700 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 89 |
| Conread position: | 1-328 |
| Cow position: | chr18:25970900-25970579 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 3-183 |
| Cow position: | chr18:12118109-12117932 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-188 |
| Cow position: | chr18:49161721-49161528 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 3-192 |
| Cow position: | chr18:14480208-14480387 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-194 |
| Cow position: | chr18:39115409-39115219 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 120, 148 |
| Conread position: | 3-195 |
| Cow position: | chr18:32860382-32860566 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 186, 82 |
| Conread position: | 3-199 |
| Cow position: | chr18:329538-329352 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 3-199 |
| Cow position: | chr18:9806145-9806343 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-202 |
| Cow position: | chr18:4578734-4578539 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 3-203 |
| Cow position: | chr18:5486986-5487178 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 3-203 |
| Cow position: | chr18:51537925-51537732 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 59, 63 |
| Conread position: | 3-205 |
| Cow position: | chr18:7649729-7649929 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-205 |
| Cow position: | chr18:11368028-11367828 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 3-205 |
| Cow position: | chr18:22065628-22065421 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 3-207 |
| Cow position: | chr18:36097935-36098137 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 3-210 |
| Cow position: | chr18:11166714-11166917 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 120, 86 |
| Conread position: | 3-210 |
| Cow position: | chr18:23808138-23807936 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 126, 75 |
| Conread position: | 3-210 |
| Cow position: | chr18:50566604-50566809 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 3-210 |
| Cow position: | chr18:51211916-51212117 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 3-210 |
| Cow position: | chr18:56150921-56150713 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 3-211 |
| Cow position: | chr18:19143782-19143572 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 125, 41 |
| Conread position: | 3-211 |
| Cow position: | chr18:35827680-35827472 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 3-211 |
| Cow position: | chr18:36445167-36445377 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 3-212 |
| Cow position: | chr18:11233166-11233372 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 130, 48 |
| Conread position: | 3-212 |
| Cow position: | chr18:26586929-26586718 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 130, 151 |
| Conread position: | 3-213 |
| Cow position: | chr18:38985422-38985629 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 3-215 |
| Cow position: | chr18:35636615-35636405 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 206, 108 |
| Conread position: | 3-217 |
| Cow position: | chr18:56168184-56167978 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 32 |
| Conread position: | 3-221 |
| Cow position: | chr18:22874608-22874818 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 3-233 |
| Cow position: | chr18:52868930-52869164 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 95, 87 |
| Conread position: | 3-235 |
| Cow position: | chr18:39185344-39185570 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-237 |
| Cow position: | chr18:11680455-11680691 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 195, 147 |
| Conread position: | 3-267 |
| Cow position: | chr18:33606367-33606622 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 3-278 |
| Cow position: | chr18:25647515-25647243 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 3-281 |
| Cow position: | chr18:55505135-55505415 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 40, 155 |
| Conread position: | 3-282 |
| Cow position: | chr18:11691677-11691399 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 244, 147 |
| Conread position: | 3-282 |
| Cow position: | chr18:16417962-16417697 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 261, 109 |
| Conread position: | 3-282 |
| Cow position: | chr18:20864718-20864989 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 150 |
| Conread position: | 3-282 |
| Cow position: | chr18:23766681-23766401 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 233, 38 |
| Conread position: | 3-282 |
| Cow position: | chr18:36477930-36478212 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 245, 112 |
| Conread position: | 3-283 |
| Cow position: | chr18:29058761-29058488 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 182, 57 |
| Conread position: | 3-293 |
| Cow position: | chr18:50993535-50993249 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 247, 150 |
| Conread position: | 3-293 |
| Cow position: | chr18:54574578-54574299 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 209, 73 |
| Conread position: | 3-298 |
| Cow position: | chr18:25003141-25002863 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3-301 |
| Cow position: | chr18:23652880-23652597 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 247, 58 |
| Conread position: | 3-303 |
| Cow position: | chr18:33299632-33299934 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 60, 111 |
| Conread position: | 3-304 |
| Cow position: | chr18:6610122-6609826 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 128, 48 |
| Conread position: | 3-304 |
| Cow position: | chr18:16842331-16842027 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 139, 73 |
| Conread position: | 3-304 |
| Cow position: | chr18:19193615-19193334 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 244, 48 |
| Conread position: | 3-304 |
| Cow position: | chr18:28101361-28101664 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 77, 148 |
| Conread position: | 3-304 |
| Cow position: | chr18:29356895-29356593 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 244, 82 |
| Conread position: | 3-304 |
| Cow position: | chr18:37002364-37002663 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 244, 147 |
| Conread position: | 3-305 |
| Cow position: | chr18:46437017-46436733 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 260, 39 |
| Conread position: | 3-309 |
| Cow position: | chr18:26535782-26535471 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 125, 49 |
| Conread position: | 3-312 |
| Cow position: | chr18:9365647-9365961 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 224, 147 |
| Conread position: | 3-312 |
| Cow position: | chr18:42060814-42061116 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 160, 75 |
| Conread position: | 3-316 |
| Cow position: | chr18:5578037-5578351 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 244, 152 |
| Conread position: | 3-318 |
| Cow position: | chr18:29768648-29768967 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 131, 75 |
| Conread position: | 3-321 |
| Cow position: | chr18:6275551-6275860 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 261, 122 |
| Conread position: | 3-323 |
| Cow position: | chr18:7322468-7322776 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 173 |
| Conread position: | 3-323 |
| Cow position: | chr18:39662520-39662830 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 46 |
| Conread position: | 3-323 |
| Cow position: | chr18:50700401-50700738 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 228 |
| Conread position: | 3-324 |
| Cow position: | chr18:9974591-9974276 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 225, 73 |
| Conread position: | 3-324 |
| Cow position: | chr18:11377099-11377416 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 105, 43 |
| Conread position: | 3-324 |
| Cow position: | chr18:28658179-28657859 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 105, 148 |
| Conread position: | 3-324 |
| Cow position: | chr18:35797359-35797671 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 83 |
| Conread position: | 3-324 |
| Cow position: | chr18:36458669-36458983 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 120, 75 |
| Conread position: | 3-327 |
| Cow position: | chr18:18919218-18918905 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 120, 52 |
| Conread position: | 3-327 |
| Cow position: | chr18:20174395-20174074 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 143, 75 |
| Conread position: | 3-327 |
| Cow position: | chr18:22121147-22120830 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 251, 72 |
| Conread position: | 3-327 |
| Cow position: | chr18:23447347-23447006 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 126, 75 |
| Conread position: | 3-327 |
| Cow position: | chr18:29796690-29796373 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 3-327 |
| Cow position: | chr18:37023822-37023495 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 217, 147 |
| Conread position: | 3-328 |
| Cow position: | chr18:1495040-1495359 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 247, 75 |
| Conread position: | 3-328 |
| Cow position: | chr18:4039914-4040225 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-328 |
| Cow position: | chr18:7359469-7359801 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 193 |
| Conread position: | 3-328 |
| Cow position: | chr18:10101226-10101543 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 3-328 |
| Cow position: | chr18:17334681-17334365 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 151, 75 |
| Conread position: | 3-328 |
| Cow position: | chr18:21175917-21176243 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 220 |
| Conread position: | 3-328 |
| Cow position: | chr18:21682238-21681917 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 204, 67 |
| Conread position: | 3-328 |
| Cow position: | chr18:21939090-21939410 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 149, 75 |
| Conread position: | 3-328 |
| Cow position: | chr18:23424665-23424974 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 217, 10 |
| Conread position: | 3-328 |
| Cow position: | chr18:32773614-32773934 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 31 |
| Conread position: | 3-328 |
| Cow position: | chr18:33275043-33275345 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 3-328 |
| Cow position: | chr18:45961525-45961215 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 200, 26 |
| Conread position: | 3-328 |
| Cow position: | chr18:51298216-51298535 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 126, 71 |
| Conread position: | 3-328 |
| Cow position: | chr18:56159200-56159517 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 4-201 |
| Cow position: | chr18:5646982-5647175 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 123, 76 |
| Conread position: | 4-204 |
| Cow position: | chr18:31562658-31562464 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 4-304 |
| Cow position: | chr18:44262358-44262661 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 195, 106 |
| Conread position: | 5-237 |
| Cow position: | chr18:6290521-6290750 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-324 |
| Cow position: | chr18:17004987-17005312 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 145 |
| Conread position: | 5-324 |
| Cow position: | chr18:34325223-34324903 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 214 |
| Conread position: | 5-324 |
| Cow position: | chr18:50381994-50382300 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 5-328 |
| Cow position: | chr18:51500345-51500019 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 6-209 |
| Cow position: | chr18:35582364-35582165 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 6-215 |
| Cow position: | chr18:52382436-52382641 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 70, 51 |
| Conread position: | 6-312 |
| Cow position: | chr18:4515765-4516069 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 242, 85 |
| Conread position: | 7-205 |
| Cow position: | chr18:19486853-19487045 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 7-208 |
| Cow position: | chr18:26335077-26334878 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 118, 70 |
| Conread position: | 7-324 |
| Cow position: | chr18:19273366-19273044 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 90, 103 |
| Conread position: | 7-327 |
| Cow position: | chr18:13359801-13360109 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 122, 29 |
| Conread position: | 7-328 |
| Cow position: | chr18:23360368-23360684 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 10-203 |
| Cow position: | chr18:17670060-17669872 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 10-204 |
| Cow position: | chr18:12023891-12023704 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 10-208 |
| Cow position: | chr18:8164298-8164101 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 10-328 |
| Cow position: | chr18:22411875-22411555 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 68 |
| Conread position: | 13-323 |
| Cow position: | chr18:19363677-19363987 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 114, 20 |
| Conread position: | 16-328 |
| Cow position: | chr18:38794118-38793831 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 244, 51 |
| Conread position: | 17-211 |
| Cow position: | chr18:3158853-3158664 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 17-301 |
| Cow position: | chr18:45104698-45104413 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 115 |
| Conread position: | 17-320 |
| Cow position: | chr18:17649987-17649690 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 230, 61 |
| Conread position: | 18-206 |
| Cow position: | chr18:26286661-26286843 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 20-276 |
| Cow position: | chr18:32883053-32883310 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 21-328 |
| Cow position: | chr18:51443678-51443383 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 129, 68 |
| Conread position: | 22-209 |
| Cow position: | chr18:34021144-34021321 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 27-273 |
| Cow position: | chr18:33007815-33008063 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 220, 129 |
| Conread position: | 29-209 |
| Cow position: | chr18:42966615-42966800 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 66 |
| Conread position: | 29-304 |
| Cow position: | chr18:18592233-18592504 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 171, 95 |
| Conread position: | 37-283 |
| Cow position: | chr18:219101-219346 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 92, 35 |
| Conread position: | 37-304 |
| Cow position: | chr18:42479823-42479555 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 210, 119 |
| Conread position: | 37-328 |
| Cow position: | chr18:21574761-21575042 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 122, 41 |
| Conread position: | 37-328 |
| Cow position: | chr18:51587776-51587488 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 39-210 |
| Cow position: | chr18:28823198-28823030 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 37 |
| Conread position: | 39-280 |
| Cow position: | chr18:48829016-48828767 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 118 |
| Conread position: | 40-309 |
| Cow position: | chr18:306292-306030 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 206, 103 |
| Conread position: | 40-328 |
| Cow position: | chr18:6157694-6157969 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 161, 38 |
| Conread position: | 41-309 |
| Cow position: | chr18:36123306-36123571 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 77 |
| Conread position: | 46-328 |
| Cow position: | chr18:54275309-54275586 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 161, 45 |
| Conread position: | 47-324 |
| Cow position: | chr18:23715110-23714831 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 49 |
| Conread position: | 49-210 |
| Cow position: | chr18:54056339-54056495 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 49-327 |
| Cow position: | chr18:3211649-3211933 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 50-194 |
| Cow position: | chr18:36907376-36907238 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 50-287 |
| Cow position: | chr18:36911902-36911671 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 146, 93 |
| Conread position: | 51-328 |
| Cow position: | chr18:15831795-15831541 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 199, 22 |
| Conread position: | 55-211 |
| Cow position: | chr18:41072788-41072941 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 63-324 |
| Cow position: | chr18:1954799-1954537 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 88 |
| Conread position: | 66-324 |
| Cow position: | chr18:18369569-18369309 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 184, 84 |
| Conread position: | 69-304 |
| Cow position: | chr18:7108922-7109161 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 73-327 |
| Cow position: | chr18:2864198-2863935 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 161 |
| Conread position: | 78-327 |
| Cow position: | chr18:19896650-19896396 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 90-328 |
| Cow position: | chr18:32517543-32517297 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 145 |
| Conread position: | 93-327 |
| Cow position: | chr18:43555704-43555469 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 157, 57 |
| Conread position: | 96-324 |
| Cow position: | chr18:5766236-5766461 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 151, 54 |
| Conread position: | 96-328 |
| Cow position: | chr18:37745628-37745856 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 143 |
| Conread position: | 99-328 |
| Cow position: | chr18:5755808-5756034 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 149, 57 |
| Conread position: | 117-321 |
| Cow position: | chr18:19687864-19688073 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 122-328 |
| Cow position: | chr18:21706329-21706128 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 132, 17 |
| Conread position: | 124-319 |
| Cow position: | chr18:32908900-32909097 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 82, 19 |
| Conread position: | 149-328 |
| Cow position: | chr18:35359846-35360023 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 65 |
Show alignments to all cow chromosomes.