Cow genome map


           Conread name:
           rcsk07_i5.y1
        

               Conread position:
               2-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               122, 57
               

               Conread position:
               3-183
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               5, 67
               

               Conread position:
               3-183
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               3-192
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               129, 82
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               134, 75
               

               Conread position:
               3-211
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               3-211
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               109, 93
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               125, 29
               

               Conread position:
               3-234
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               88, 106
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               119, 75
               

               Conread position:
               3-262
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               130, 18
               

               Conread position:
               3-262
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               244, 147
               

               Conread position:
               3-280
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               204, 36
               

               Conread position:
               3-282
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 6
               

               Conread position:
               3-282
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               244, 110
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               254, 75
               

               Conread position:
               3-301
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 167
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               244, 67
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               225, 154
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               139, 96
               

               Conread position:
               3-304
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               236, 144
               

               Conread position:
               3-304
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               125, 82
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               239, 14
               

               Conread position:
               3-308
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               228, 26
               

               Conread position:
               3-312
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               125, 58
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               143, 75
               

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               296, 10
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               103, 212
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               121, 93
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 43
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               212, 10
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               259, 83
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               243, 16
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               126, 69
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 72
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               258, 147
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               244, 62
               

               Conread position:
               3-327
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               249, 58
               

               Conread position:
               3-327
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               205, 62
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 75
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               158, 97
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               108, 123
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 83
               

               Conread position:
               4-205
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 91
               

               Conread position:
               4-208
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               4-210
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 68
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               123, 34
               

               Conread position:
               4-303
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               203, 121
               

               Conread position:
               4-304
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               4-319
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               4-328
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 25
               

               Conread position:
               5-208
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               126, 73
               

               Conread position:
               7-209
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               7-237
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               192, 79
               

               Conread position:
               10-324
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               237, 43
               

               Conread position:
               13-324
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               293, 74
               

               Conread position:
               14-286
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               233, 42
               

               Conread position:
               17-209
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               17-283
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               190, 61
               

               Conread position:
               17-304
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               17-312
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               246, 120
               

               Conread position:
               19-260
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               28-328
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               234, 199
               

               Conread position:
               37-304
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 114
               

               Conread position:
               37-324
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               210, 102
               

               Conread position:
               38-327
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               205, 34
               

               Conread position:
               46-205
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 105
               

               Conread position:
               46-221
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 107
               

               Conread position:
               46-321
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               82, 107
               

               Conread position:
               51-327
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               78, 100
               

               Conread position:
               52-328
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               57-328
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               58-324
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               145, 181
               

               Conread position:
               61-328
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               93, 186
               

               Conread position:
               63-206
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               74-323
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               40, 35
               

               Conread position:
               75-321
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               76-328
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               78-324
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               170, 32
               

               Conread position:
               83-324
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               54, 123
               

               Conread position:
               84-211
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               96-328
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               44, 111
               

               Conread position:
               107-323
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               143, 110
               

               Conread position:
               110-328
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               137, 12
               

               Conread position:
               119-328
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               84, 75
               

               Conread position:
               127-328
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               129-328
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               121, 17
               

               Conread position:
               139-328
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               111, 100
               

               Conread position:
               152-314
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               98, 83
               
Show alignments to all cow chromosomes.