Cow genome map

Conread name: rcsk07_i5.y1

Conread position: 3-168
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 147, 71

Conread position: 3-168
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 3-169
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 10

Conread position: 3-191
Cow position:
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 152, 0

Conread position: 3-192
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 0

Conread position: 3-203
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 3-203
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 150, 83

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 44

Conread position: 3-205
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 3-205
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 3-207
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 126, 107

Conread position: 3-208
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 109, 0

Conread position: 3-208
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 28

Conread position: 3-209
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 123

Conread position: 3-209
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 11

Conread position: 3-210
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 41

Conread position: 3-210
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 24

Conread position: 3-210
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 0

Conread position: 3-210
Cow position:
Alignm length: 208
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 3-211
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 94

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 148

Conread position: 3-212
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 147, 75

Conread position: 3-212
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 3-212
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 10

Conread position: 3-212
Cow position:
Alignm length: 210
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 3-215
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 121, 75

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 36

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 196, 32

Conread position: 3-216
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 197, 38

Conread position: 3-223
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 44

Conread position: 3-226
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 3-250
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 3-255
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 244, 67

Conread position: 3-281
Cow position:
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 219, 16

Conread position: 3-283
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 247, 123

Conread position: 3-283
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 244, 65

Conread position: 3-284
Cow position:
Alignm length: 289
Alignm identity: 193
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 135

Conread position: 3-285
Cow position:
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 248, 143

Conread position: 3-302
Cow position:
Alignm length: 305
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 244, 122

Conread position: 3-303
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 3-304
Cow position:
Alignm length: 312
Alignm identity: 210
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 114, 52

Conread position: 3-304
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 130, 153

Conread position: 3-304
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 244, 10

Conread position: 3-304
Cow position:
Alignm length: 310
Alignm identity: 206
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 123, 92

Conread position: 3-304
Cow position:
Alignm length: 310
Alignm identity: 201
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 121, 75

Conread position: 3-304
Cow position:
Alignm length: 306
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 247, 73

Conread position: 3-308
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 237, 85

Conread position: 3-312
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 243, 65

Conread position: 3-317
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 122

Conread position: 3-321
Cow position:
Alignm length: 332
Alignm identity: 221
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 143, 67

Conread position: 3-323
Cow position:
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 122

Conread position: 3-323
Cow position:
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 24

Conread position: 3-323
Cow position:
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 123

Conread position: 3-323
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 75

Conread position: 3-323
Cow position:
Alignm length: 326
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 247, 75

Conread position: 3-324
Cow position:
Alignm length: 323
Alignm identity: 209
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 303, 77

Conread position: 3-324
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 260, 110

Conread position: 3-324
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 125, 35

Conread position: 3-324
Cow position:
Alignm length: 325
Alignm identity: 218
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 217, 75

Conread position: 3-324
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 243, 87

Conread position: 3-324
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 261, 93

Conread position: 3-324
Cow position:
Alignm length: 334
Alignm identity: 220
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 132, 150

Conread position: 3-326
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 130, 73

Conread position: 3-327
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 48

Conread position: 3-327
Cow position:
Alignm length: 332
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 90

Conread position: 3-327
Cow position:
Alignm length: 326
Alignm identity: 214
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 303, 43

Conread position: 3-327
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 81

Conread position: 3-327
Cow position:
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 67

Conread position: 3-327
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 94, 220

Conread position: 3-327
Cow position:
Alignm length: 332
Alignm identity: 224
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 126, 148

Conread position: 3-327
Cow position:
Alignm length: 331
Alignm identity: 210
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 204, 89

Conread position: 3-327
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 133, 308

Conread position: 3-327
Cow position:
Alignm length: 331
Alignm identity: 216
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 130, 73

Conread position: 3-327
Cow position:
Alignm length: 331
Alignm identity: 223
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 253, 10

Conread position: 3-328
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 18

Conread position: 3-328
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 247, 10

Conread position: 3-328
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 79

Conread position: 3-328
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 13, 77

Conread position: 3-328
Cow position:
Alignm length: 346
Alignm identity: 230
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 151, 237

Conread position: 3-328
Cow position:
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 122

Conread position: 3-328
Cow position:
Alignm length: 331
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 48

Conread position: 3-328
Cow position:
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 204

Conread position: 3-328
Cow position:
Alignm length: 327
Alignm identity: 214
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 213, 116

Conread position: 3-328
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 149, 122

Conread position: 4-210
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 111

Conread position: 4-211
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 4-237
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 151, 0

Conread position: 4-239
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 110, 81

Conread position: 4-273
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 131, 109

Conread position: 4-302
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 246, 66

Conread position: 4-328
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 11

Conread position: 5-245
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 207, 143

Conread position: 5-248
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 6-262
Cow position:
Alignm length: 264
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 74

Conread position: 7-327
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 257, 143

Conread position: 7-328
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 90

Conread position: 8-207
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 13-322
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 217, 56

Conread position: 15-221
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 76

Conread position: 17-204
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 17-206
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 182, 133

Conread position: 17-211
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 17-303
Cow position:
Alignm length: 292
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 230, 69

Conread position: 17-303
Cow position:
Alignm length: 295
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 63

Conread position: 17-304
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 134

Conread position: 17-304
Cow position:
Alignm length: 298
Alignm identity: 203
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 115, 34

Conread position: 17-324
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 112, 79

Conread position: 18-207
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 19-328
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 228, 31

Conread position: 22-277
Cow position:
Alignm length: 262
Alignm identity: 176
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 25, 61

Conread position: 23-261
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 191, 67

Conread position: 24-259
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 223, 126

Conread position: 27-325
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 110, 0

Conread position: 28-198
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 32-313
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 215, 72

Conread position: 33-304
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 5, 48

Conread position: 36-328
Cow position:
Alignm length: 307
Alignm identity: 199
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 33

Conread position: 37-328
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 34

Conread position: 41-210
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 41-212
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 47-304
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 152, 103

Conread position: 48-306
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 30

Conread position: 50-277
Cow position:
Alignm length: 233
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 197, 100

Conread position: 51-328
Cow position:
Alignm length: 282
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 196, 35

Conread position: 51-328
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 172, 29

Conread position: 52-205
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 52-254
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 68, 186

Conread position: 53-205
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 54-319
Cow position:
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 160, 15

Conread position: 55-212
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 55-305
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 192, 133

Conread position: 68-202
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 68-211
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 84

Conread position: 68-219
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 68-303
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 84

Conread position: 114-328
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 19

Conread position: 116-324
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 8

Conread position: 123-324
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 115

Conread position: 125-328
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 145-328
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 19

Show alignments to all cow chromosomes.