Cow genome map
| Conread name: | rcsk07_i5.y1 |
| Conread position: | 3-168 |
| Cow position: | chr27:16513692-16513855 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 147, 71 |
| Conread position: | 3-168 |
| Cow position: | chr27:31372105-31372263 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 3-169 |
| Cow position: | chr27:29400007-29399843 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 3-191 |
| Cow position: | chr27:27055767-27055580 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 3-192 |
| Cow position: | chr27:6074106-6073925 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-199 |
| Cow position: | chr27:11762550-11762736 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 3-203 |
| Cow position: | chr27:25292337-25292156 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-203 |
| Cow position: | chr27:25411330-25411526 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 83 |
| Conread position: | 3-205 |
| Cow position: | chr27:9159383-9159185 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 3-205 |
| Cow position: | chr27:16580811-16580613 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 3-205 |
| Cow position: | chr27:24321379-24321178 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 3-207 |
| Cow position: | chr27:14902459-14902663 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 126, 107 |
| Conread position: | 3-208 |
| Cow position: | chr27:9090612-9090814 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 3-208 |
| Cow position: | chr27:22498743-22498546 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 3-209 |
| Cow position: | chr27:1903252-1903047 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 123 |
| Conread position: | 3-209 |
| Cow position: | chr27:24357454-24357246 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 134, 11 |
| Conread position: | 3-210 |
| Cow position: | chr27:6620335-6620132 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 41 |
| Conread position: | 3-210 |
| Cow position: | chr27:19577864-19577662 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 3-210 |
| Cow position: | chr27:27234215-27234009 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 3-210 |
| Cow position: | chr27:30792747-30792950 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 3-211 |
| Cow position: | chr27:4664659-4664467 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-211 |
| Cow position: | chr27:6523235-6523024 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 94 |
| Conread position: | 3-211 |
| Cow position: | chr27:26224079-26224287 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 126, 148 |
| Conread position: | 3-212 |
| Cow position: | chr27:6037312-6037108 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 3-212 |
| Cow position: | chr27:15200886-15200686 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-212 |
| Cow position: | chr27:23454953-23455170 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 3-212 |
| Cow position: | chr27:27867503-27867705 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 3-215 |
| Cow position: | chr27:20592173-20591962 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 121, 75 |
| Conread position: | 3-215 |
| Cow position: | chr27:27554497-27554702 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 124, 36 |
| Conread position: | 3-215 |
| Cow position: | chr27:30890476-30890268 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 196, 32 |
| Conread position: | 3-216 |
| Cow position: | chr27:28164222-28164426 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 197, 38 |
| Conread position: | 3-223 |
| Cow position: | chr27:26595621-26595394 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 3-226 |
| Cow position: | chr27:23659151-23659365 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-250 |
| Cow position: | chr27:707137-706901 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 3-255 |
| Cow position: | chr27:26398069-26398312 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 3-256 |
| Cow position: | chr27:30551185-30550938 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 244, 67 |
| Conread position: | 3-281 |
| Cow position: | chr27:26433623-26433892 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 219, 16 |
| Conread position: | 3-283 |
| Cow position: | chr27:10980053-10979776 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 247, 123 |
| Conread position: | 3-283 |
| Cow position: | chr27:25380180-25379902 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 244, 65 |
| Conread position: | 3-284 |
| Cow position: | chr27:19589668-19589390 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 135 |
| Conread position: | 3-285 |
| Cow position: | chr27:25471329-25471050 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 248, 143 |
| Conread position: | 3-302 |
| Cow position: | chr27:22220743-22220448 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 244, 122 |
| Conread position: | 3-303 |
| Cow position: | chr27:26935730-26936003 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-304 |
| Cow position: | chr27:1353774-1353475 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 114, 52 |
| Conread position: | 3-304 |
| Cow position: | chr27:17397257-17397562 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 130, 153 |
| Conread position: | 3-304 |
| Cow position: | chr27:22171487-22171192 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 244, 10 |
| Conread position: | 3-304 |
| Cow position: | chr27:24331915-24331613 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 123, 92 |
| Conread position: | 3-304 |
| Cow position: | chr27:30765221-30764923 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 121, 75 |
| Conread position: | 3-304 |
| Cow position: | chr27:30915191-30914902 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 247, 73 |
| Conread position: | 3-308 |
| Cow position: | chr27:4673210-4672900 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 237, 85 |
| Conread position: | 3-312 |
| Cow position: | chr27:23483412-23483110 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 243, 65 |
| Conread position: | 3-317 |
| Cow position: | chr27:11535907-11536227 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 143, 122 |
| Conread position: | 3-321 |
| Cow position: | chr27:18739577-18739251 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 143, 67 |
| Conread position: | 3-323 |
| Cow position: | chr27:6454404-6454080 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 122 |
| Conread position: | 3-323 |
| Cow position: | chr27:8048550-8048862 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 24 |
| Conread position: | 3-323 |
| Cow position: | chr27:15319641-15319329 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 3-323 |
| Cow position: | chr27:15866413-15866091 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 134, 75 |
| Conread position: | 3-323 |
| Cow position: | chr27:26161685-26161374 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 247, 75 |
| Conread position: | 3-324 |
| Cow position: | chr27:6550640-6550335 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 303, 77 |
| Conread position: | 3-324 |
| Cow position: | chr27:22418575-22418895 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 260, 110 |
| Conread position: | 3-324 |
| Cow position: | chr27:23882185-23882496 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 125, 35 |
| Conread position: | 3-324 |
| Cow position: | chr27:25676416-25676101 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 217, 75 |
| Conread position: | 3-324 |
| Cow position: | chr27:26413066-26413383 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 243, 87 |
| Conread position: | 3-324 |
| Cow position: | chr27:28921707-28922021 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 261, 93 |
| Conread position: | 3-324 |
| Cow position: | chr27:28931598-28931930 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 132, 150 |
| Conread position: | 3-326 |
| Cow position: | chr27:19543720-19544051 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 130, 73 |
| Conread position: | 3-327 |
| Cow position: | chr27:2592731-2592410 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 125, 48 |
| Conread position: | 3-327 |
| Cow position: | chr27:4385877-4386193 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 90 |
| Conread position: | 3-327 |
| Cow position: | chr27:12596948-12596645 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 303, 43 |
| Conread position: | 3-327 |
| Cow position: | chr27:17473002-17472681 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 122, 81 |
| Conread position: | 3-327 |
| Cow position: | chr27:19647752-19648074 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 67 |
| Conread position: | 3-327 |
| Cow position: | chr27:23554130-23554458 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 94, 220 |
| Conread position: | 3-327 |
| Cow position: | chr27:26427939-26428264 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 126, 148 |
| Conread position: | 3-327 |
| Cow position: | chr27:26807374-26807697 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 204, 89 |
| Conread position: | 3-327 |
| Cow position: | chr27:27640802-27641143 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 133, 308 |
| Conread position: | 3-327 |
| Cow position: | chr27:28518475-28518164 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 130, 73 |
| Conread position: | 3-327 |
| Cow position: | chr27:30868550-30868872 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 253, 10 |
| Conread position: | 3-328 |
| Cow position: | chr27:11416630-11416320 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 18 |
| Conread position: | 3-328 |
| Cow position: | chr27:13006023-13005717 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 247, 10 |
| Conread position: | 3-328 |
| Cow position: | chr27:14937239-14937562 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 79 |
| Conread position: | 3-328 |
| Cow position: | chr27:21139014-21138698 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 3-328 |
| Cow position: | chr27:25982517-25982851 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 237 |
| Conread position: | 3-328 |
| Cow position: | chr27:25998894-25998569 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 122 |
| Conread position: | 3-328 |
| Cow position: | chr27:26300028-26299710 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 86, 48 |
| Conread position: | 3-328 |
| Cow position: | chr27:26440866-26441180 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 204 |
| Conread position: | 3-328 |
| Cow position: | chr27:26492511-26492829 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 213, 116 |
| Conread position: | 3-328 |
| Cow position: | chr27:29019559-29019866 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 149, 122 |
| Conread position: | 4-210 |
| Cow position: | chr27:31499256-31499050 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 111 |
| Conread position: | 4-211 |
| Cow position: | chr27:16871727-16871927 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 4-237 |
| Cow position: | chr27:22547216-22547443 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 4-239 |
| Cow position: | chr27:12231720-12231953 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 110, 81 |
| Conread position: | 4-273 |
| Cow position: | chr27:18558552-18558280 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 109 |
| Conread position: | 4-302 |
| Cow position: | chr27:30354155-30354450 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 246, 66 |
| Conread position: | 4-328 |
| Cow position: | chr27:27049724-27050041 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 5-245 |
| Cow position: | chr27:4812689-4812927 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 207, 143 |
| Conread position: | 5-248 |
| Cow position: | chr27:794971-794739 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 6-262 |
| Cow position: | chr27:27040794-27040539 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 127, 74 |
| Conread position: | 7-327 |
| Cow position: | chr27:13252195-13251884 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 257, 143 |
| Conread position: | 7-328 |
| Cow position: | chr27:8430253-8430571 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 8-207 |
| Cow position: | chr27:27550563-27550752 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 13-322 |
| Cow position: | chr27:24224728-24225025 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 217, 56 |
| Conread position: | 15-221 |
| Cow position: | chr27:9169467-9169668 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 114, 76 |
| Conread position: | 17-204 |
| Cow position: | chr27:27245176-27245360 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 17-206 |
| Cow position: | chr27:13875910-13875721 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 182, 133 |
| Conread position: | 17-211 |
| Cow position: | chr27:23070184-23070373 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 17-303 |
| Cow position: | chr27:19685539-19685820 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 230, 69 |
| Conread position: | 17-303 |
| Cow position: | chr27:22426653-22426939 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 17-304 |
| Cow position: | chr27:19388194-19387911 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 17-304 |
| Cow position: | chr27:21977962-21978246 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 17-324 |
| Cow position: | chr27:30988973-30988669 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 112, 79 |
| Conread position: | 18-207 |
| Cow position: | chr27:28038163-28038351 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 19-328 |
| Cow position: | chr27:6160155-6159848 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 228, 31 |
| Conread position: | 22-277 |
| Cow position: | chr27:26424415-26424667 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 23-261 |
| Cow position: | chr27:19637812-19637578 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 191, 67 |
| Conread position: | 24-259 |
| Cow position: | chr27:22268673-22268441 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 223, 126 |
| Conread position: | 27-325 |
| Cow position: | chr27:23662439-23662722 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 28-198 |
| Cow position: | chr27:8629707-8629874 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 32-313 |
| Cow position: | chr27:16781025-16780750 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 215, 72 |
| Conread position: | 33-304 |
| Cow position: | chr27:23891098-23890830 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 5, 48 |
| Conread position: | 36-328 |
| Cow position: | chr27:4007089-4007389 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 97, 33 |
| Conread position: | 37-328 |
| Cow position: | chr27:23600420-23600140 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 34 |
| Conread position: | 41-210 |
| Cow position: | chr27:465113-464944 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-212 |
| Cow position: | chr27:30677061-30676894 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 47-304 |
| Cow position: | chr27:1123180-1122924 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 152, 103 |
| Conread position: | 48-306 |
| Cow position: | chr27:16493716-16493474 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 50-277 |
| Cow position: | chr27:17331645-17331415 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 197, 100 |
| Conread position: | 51-328 |
| Cow position: | chr27:12243994-12244258 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 196, 35 |
| Conread position: | 51-328 |
| Cow position: | chr27:19601518-19601240 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 172, 29 |
| Conread position: | 52-205 |
| Cow position: | chr27:1141886-1142037 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 52-254 |
| Cow position: | chr27:18948450-18948653 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 68, 186 |
| Conread position: | 53-205 |
| Cow position: | chr27:29679183-29679332 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 54-319 |
| Cow position: | chr27:12424788-12425040 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 160, 15 |
| Conread position: | 55-212 |
| Cow position: | chr27:10086544-10086698 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 55-305 |
| Cow position: | chr27:427110-426861 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 192, 133 |
| Conread position: | 68-202 |
| Cow position: | chr27:6038725-6038591 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-211 |
| Cow position: | chr27:4011807-4011662 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 68-219 |
| Cow position: | chr27:14874767-14874615 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 68-303 |
| Cow position: | chr27:8168301-8168537 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 114-328 |
| Cow position: | chr27:30365394-30365186 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 19 |
| Conread position: | 116-324 |
| Cow position: | chr27:19083633-19083845 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 123-324 |
| Cow position: | chr27:11356462-11356666 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 125-328 |
| Cow position: | chr27:23959364-23959171 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 145-328 |
| Cow position: | chr27:6884073-6883901 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 114, 19 |
Show alignments to all cow chromosomes.