Cow genome map
| Conread name: | rcsk07_i5.y1 |
| Conread position: | 1-211 |
| Cow position: | chr28:34150760-34150551 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-327 |
| Cow position: | chr28:26922594-26922275 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 127, 90 |
| Conread position: | 2-324 |
| Cow position: | chr28:10053567-10053235 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 124, 56 |
| Conread position: | 3-152 |
| Cow position: | chr28:10514319-10514174 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-193 |
| Cow position: | chr28:21104074-21103878 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 3-194 |
| Cow position: | chr28:17738306-17738115 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 124, 148 |
| Conread position: | 3-199 |
| Cow position: | chr28:5658326-5658515 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 3-203 |
| Cow position: | chr28:6486366-6486562 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 3-203 |
| Cow position: | chr28:23775818-23776014 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 3-206 |
| Cow position: | chr28:11451694-11451493 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 120, 74 |
| Conread position: | 3-207 |
| Cow position: | chr28:28414440-28414645 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-208 |
| Cow position: | chr28:3144119-3143913 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 121, 75 |
| Conread position: | 3-208 |
| Cow position: | chr28:22170945-22170743 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 75 |
| Conread position: | 3-209 |
| Cow position: | chr28:14151007-14151205 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3-209 |
| Cow position: | chr28:15007937-15008135 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 3-209 |
| Cow position: | chr28:21502167-21502367 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 129, 82 |
| Conread position: | 3-209 |
| Cow position: | chr28:25596405-25596601 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 204, 71 |
| Conread position: | 3-209 |
| Cow position: | chr28:29392775-29392985 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 151, 185 |
| Conread position: | 3-210 |
| Cow position: | chr28:12942155-12942353 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 178, 14 |
| Conread position: | 3-210 |
| Cow position: | chr28:24996815-24996614 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 3-211 |
| Cow position: | chr28:23616175-23616384 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 149 |
| Conread position: | 3-211 |
| Cow position: | chr28:25796889-25797094 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 3-215 |
| Cow position: | chr28:10642245-10642038 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-215 |
| Cow position: | chr28:12619335-12619547 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 147, 192 |
| Conread position: | 3-215 |
| Cow position: | chr28:14493315-14493521 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 3-215 |
| Cow position: | chr28:17625364-17625152 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-223 |
| Cow position: | chr28:2340304-2340521 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 3-226 |
| Cow position: | chr28:15263952-15263727 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 117, 151 |
| Conread position: | 3-237 |
| Cow position: | chr28:15677669-15677891 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 209, 13 |
| Conread position: | 3-237 |
| Cow position: | chr28:15688813-15689049 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 190, 73 |
| Conread position: | 3-246 |
| Cow position: | chr28:9390593-9390357 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 8, 91 |
| Conread position: | 3-259 |
| Cow position: | chr28:4022155-4022409 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 125, 86 |
| Conread position: | 3-261 |
| Cow position: | chr28:30978054-30978295 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 247, 67 |
| Conread position: | 3-262 |
| Cow position: | chr28:33051793-33052060 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 70, 151 |
| Conread position: | 3-266 |
| Cow position: | chr28:34878200-34877939 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 3-276 |
| Cow position: | chr28:16253085-16252815 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 125, 77 |
| Conread position: | 3-282 |
| Cow position: | chr28:6971567-6971301 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 243, 67 |
| Conread position: | 3-282 |
| Cow position: | chr28:7751528-7751254 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 261, 143 |
| Conread position: | 3-282 |
| Cow position: | chr28:8022338-8022055 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 211, 46 |
| Conread position: | 3-282 |
| Cow position: | chr28:10534157-10533888 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 261, 22 |
| Conread position: | 3-283 |
| Cow position: | chr28:8408512-8408782 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 244, 38 |
| Conread position: | 3-286 |
| Cow position: | chr28:14218703-14218424 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 48 |
| Conread position: | 3-286 |
| Cow position: | chr28:18462840-18462561 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 67 |
| Conread position: | 3-289 |
| Cow position: | chr28:9285605-9285316 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 244, 147 |
| Conread position: | 3-304 |
| Cow position: | chr28:7549290-7548989 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 247, 117 |
| Conread position: | 3-304 |
| Cow position: | chr28:11426772-11426472 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 243, 10 |
| Conread position: | 3-304 |
| Cow position: | chr28:11585435-11585133 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 244, 75 |
| Conread position: | 3-304 |
| Cow position: | chr28:13474078-13474369 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 244, 67 |
| Conread position: | 3-304 |
| Cow position: | chr28:26719132-26719412 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 3-304 |
| Cow position: | chr28:27218093-27218391 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 244, 147 |
| Conread position: | 3-305 |
| Cow position: | chr28:13865618-13865912 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 109, 53 |
| Conread position: | 3-305 |
| Cow position: | chr28:20124558-20124855 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 244, 83 |
| Conread position: | 3-305 |
| Cow position: | chr28:25070889-25071189 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 103 |
| Conread position: | 3-312 |
| Cow position: | chr28:33163695-33163386 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 244, 147 |
| Conread position: | 3-319 |
| Cow position: | chr28:16686805-16687111 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 204, 83 |
| Conread position: | 3-321 |
| Cow position: | chr28:2862634-2862955 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 223, 147 |
| Conread position: | 3-323 |
| Cow position: | chr28:29455884-29455579 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3-324 |
| Cow position: | chr28:3914482-3914807 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 105, 77 |
| Conread position: | 3-324 |
| Cow position: | chr28:11884750-11884431 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 244, 58 |
| Conread position: | 3-324 |
| Cow position: | chr28:14997836-14998157 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 261, 22 |
| Conread position: | 3-324 |
| Cow position: | chr28:21354997-21355321 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 208, 60 |
| Conread position: | 3-324 |
| Cow position: | chr28:21868224-21868547 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 244, 152 |
| Conread position: | 3-324 |
| Cow position: | chr28:21873545-21873849 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-324 |
| Cow position: | chr28:24966160-24966476 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 3-324 |
| Cow position: | chr28:25826098-25825773 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 126, 75 |
| Conread position: | 3-324 |
| Cow position: | chr28:26103488-26103792 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 303, 48 |
| Conread position: | 3-324 |
| Cow position: | chr28:32300587-32300267 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 211, 67 |
| Conread position: | 3-325 |
| Cow position: | chr28:21380647-21380973 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 245, 147 |
| Conread position: | 3-327 |
| Cow position: | chr28:20313048-20313370 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 3-328 |
| Cow position: | chr28:2814726-2814415 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 247, 36 |
| Conread position: | 3-328 |
| Cow position: | chr28:4098617-4098924 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 3-328 |
| Cow position: | chr28:4308125-4307803 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 9 |
| Conread position: | 3-328 |
| Cow position: | chr28:9176981-9176661 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 223, 92 |
| Conread position: | 3-328 |
| Cow position: | chr28:13693523-13693843 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 45 |
| Conread position: | 3-328 |
| Cow position: | chr28:20265161-20265495 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 124, 87 |
| Conread position: | 3-328 |
| Cow position: | chr28:20963760-20963435 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 61, 93 |
| Conread position: | 3-328 |
| Cow position: | chr28:23231294-23230988 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 126, 26 |
| Conread position: | 3-328 |
| Cow position: | chr28:23621320-23621631 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 75 |
| Conread position: | 3-328 |
| Cow position: | chr28:25563849-25564178 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 131 |
| Conread position: | 3-328 |
| Cow position: | chr28:34199324-34199014 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 221, 48 |
| Conread position: | 4-206 |
| Cow position: | chr28:7607001-7607203 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-209 |
| Cow position: | chr28:16243985-16243785 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 124, 57 |
| Conread position: | 4-224 |
| Cow position: | chr28:30995051-30995268 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 203, 64 |
| Conread position: | 4-304 |
| Cow position: | chr28:8347508-8347800 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 122, 74 |
| Conread position: | 4-321 |
| Cow position: | chr28:7512818-7512497 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 123, 147 |
| Conread position: | 4-324 |
| Cow position: | chr28:2898769-2899079 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 125, 74 |
| Conread position: | 4-324 |
| Cow position: | chr28:15044081-15043772 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 192, 32 |
| Conread position: | 5-211 |
| Cow position: | chr28:7590407-7590205 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 5-216 |
| Cow position: | chr28:34082247-34082037 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 126, 102 |
| Conread position: | 5-328 |
| Cow position: | chr28:11501117-11500790 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 106, 84 |
| Conread position: | 6-186 |
| Cow position: | chr28:12430385-12430558 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 6-204 |
| Cow position: | chr28:4188309-4188498 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 6-324 |
| Cow position: | chr28:21598478-21598162 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 241, 83 |
| Conread position: | 7-208 |
| Cow position: | chr28:26784690-26784492 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 120, 79 |
| Conread position: | 7-320 |
| Cow position: | chr28:10744986-10745300 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 121, 77 |
| Conread position: | 7-328 |
| Cow position: | chr28:14508589-14508275 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 170, 71 |
| Conread position: | 10-207 |
| Cow position: | chr28:5188622-5188433 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 117, 68 |
| Conread position: | 10-304 |
| Cow position: | chr28:18625002-18625303 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 118, 143 |
| Conread position: | 10-323 |
| Cow position: | chr28:16204553-16204245 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 190, 140 |
| Conread position: | 13-318 |
| Cow position: | chr28:3769872-3769586 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 186, 43 |
| Conread position: | 13-319 |
| Cow position: | chr28:11006959-11007285 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 15-223 |
| Cow position: | chr28:31971966-31971767 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 17-212 |
| Cow position: | chr28:34430640-34430445 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 107, 134 |
| Conread position: | 17-221 |
| Cow position: | chr28:13607673-13607871 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 17-282 |
| Cow position: | chr28:2738025-2737759 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 230, 138 |
| Conread position: | 17-304 |
| Cow position: | chr28:23007939-23007661 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 230, 55 |
| Conread position: | 17-327 |
| Cow position: | chr28:2090951-2091256 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 110, 53 |
| Conread position: | 18-277 |
| Cow position: | chr28:3256581-3256840 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 229, 132 |
| Conread position: | 18-282 |
| Cow position: | chr28:28163879-28164135 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 229, 84 |
| Conread position: | 18-324 |
| Cow position: | chr28:7865111-7865419 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 229, 28 |
| Conread position: | 20-211 |
| Cow position: | chr28:751014-751205 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 103, 132 |
| Conread position: | 21-205 |
| Cow position: | chr28:9108232-9108416 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 135 |
| Conread position: | 21-301 |
| Cow position: | chr28:5437301-5437019 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 226, 134 |
| Conread position: | 22-328 |
| Cow position: | chr28:10035192-10035480 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 23-328 |
| Cow position: | chr28:15082133-15081828 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 28-324 |
| Cow position: | chr28:21569985-21570280 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 29-284 |
| Cow position: | chr28:4057785-4058031 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 213, 17 |
| Conread position: | 30-327 |
| Cow position: | chr28:14512325-14512626 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 177, 40 |
| Conread position: | 36-199 |
| Cow position: | chr28:34208508-34208670 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 37-304 |
| Cow position: | chr28:5128923-5128660 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 210, 114 |
| Conread position: | 37-327 |
| Cow position: | chr28:4881439-4881147 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 38-262 |
| Cow position: | chr28:25459333-25459558 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 39-327 |
| Cow position: | chr28:26982938-26982645 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 101, 206 |
| Conread position: | 40-199 |
| Cow position: | chr28:19564015-19563858 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 41-284 |
| Cow position: | chr28:23724645-23724413 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 167, 47 |
| Conread position: | 49-272 |
| Cow position: | chr28:7608164-7607942 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 147, 32 |
| Conread position: | 49-328 |
| Cow position: | chr28:6643463-6643189 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 52-255 |
| Cow position: | chr28:118234-118035 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 58 |
| Conread position: | 65-323 |
| Cow position: | chr28:1632823-1632568 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 122, 9 |
| Conread position: | 80-328 |
| Cow position: | chr28:33285267-33285016 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 171, 66 |
| Conread position: | 81-318 |
| Cow position: | chr28:15577414-15577178 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 175, 146 |
| Conread position: | 82-305 |
| Cow position: | chr28:616232-616456 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 165, 47 |
| Conread position: | 83-320 |
| Cow position: | chr28:30746879-30746644 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 164, 67 |
| Conread position: | 95-324 |
| Cow position: | chr28:4763735-4763969 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 100, 135 |
| Conread position: | 95-327 |
| Cow position: | chr28:25728059-25728287 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 56 |
| Conread position: | 99-291 |
| Cow position: | chr28:30961770-30961954 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 148, 57 |
| Conread position: | 139-323 |
| Cow position: | chr28:19253379-19253571 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 101 |
Show alignments to all cow chromosomes.