Cow genome map

Conread name: rcsk07_i5.y1

Conread position: 1-211
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 1-327
Cow position:
Alignm length: 334
Alignm identity: 218
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 127, 90

Conread position: 2-324
Cow position:
Alignm length: 336
Alignm identity: 220
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 124, 56

Conread position: 3-152
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 3-193
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 19

Conread position: 3-194
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 124, 148

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 3-203
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 135, 0

Conread position: 3-203
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 140, 0

Conread position: 3-206
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 120, 74

Conread position: 3-207
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 3-208
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 121, 75

Conread position: 3-208
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 75

Conread position: 3-209
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 3-209
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 3-209
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 129, 82

Conread position: 3-209
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 204, 71

Conread position: 3-209
Cow position:
Alignm length: 212
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 151, 185

Conread position: 3-210
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 178, 14

Conread position: 3-210
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 25

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 149

Conread position: 3-211
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 28

Conread position: 3-215
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 75, 0

Conread position: 3-215
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 147, 192

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 29

Conread position: 3-215
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-223
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 116, 0

Conread position: 3-226
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 117, 151

Conread position: 3-237
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 209, 13

Conread position: 3-237
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 190, 73

Conread position: 3-246
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 8, 91

Conread position: 3-259
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 125, 86

Conread position: 3-261
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 247, 67

Conread position: 3-262
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 151

Conread position: 3-266
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 75

Conread position: 3-276
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 125, 77

Conread position: 3-282
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 243, 67

Conread position: 3-282
Cow position:
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 261, 143

Conread position: 3-282
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 211, 46

Conread position: 3-282
Cow position:
Alignm length: 283
Alignm identity: 188
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 261, 22

Conread position: 3-283
Cow position:
Alignm length: 286
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 244, 38

Conread position: 3-286
Cow position:
Alignm length: 288
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 48

Conread position: 3-286
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 118, 67

Conread position: 3-289
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 244, 147

Conread position: 3-304
Cow position:
Alignm length: 307
Alignm identity: 209
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 247, 117

Conread position: 3-304
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 243, 10

Conread position: 3-304
Cow position:
Alignm length: 307
Alignm identity: 205
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 244, 75

Conread position: 3-304
Cow position:
Alignm length: 307
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 244, 67

Conread position: 3-304
Cow position:
Alignm length: 303
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 25

Conread position: 3-304
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 244, 147

Conread position: 3-305
Cow position:
Alignm length: 307
Alignm identity: 213
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 109, 53

Conread position: 3-305
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 244, 83

Conread position: 3-305
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 103

Conread position: 3-312
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 244, 147

Conread position: 3-319
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 204, 83

Conread position: 3-321
Cow position:
Alignm length: 328
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 223, 147

Conread position: 3-323
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 3-324
Cow position:
Alignm length: 332
Alignm identity: 225
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 105, 77

Conread position: 3-324
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 244, 58

Conread position: 3-324
Cow position:
Alignm length: 326
Alignm identity: 213
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 261, 22

Conread position: 3-324
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 208, 60

Conread position: 3-324
Cow position:
Alignm length: 328
Alignm identity: 221
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 244, 152

Conread position: 3-324
Cow position:
Alignm length: 322
Alignm identity: 221
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 3-324
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 72

Conread position: 3-324
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 126, 75

Conread position: 3-324
Cow position:
Alignm length: 323
Alignm identity: 211
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 303, 48

Conread position: 3-324
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 211, 67

Conread position: 3-325
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 245, 147

Conread position: 3-327
Cow position:
Alignm length: 336
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 35

Conread position: 3-328
Cow position:
Alignm length: 329
Alignm identity: 232
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 247, 36

Conread position: 3-328
Cow position:
Alignm length: 334
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 60

Conread position: 3-328
Cow position:
Alignm length: 338
Alignm identity: 221
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 9

Conread position: 3-328
Cow position:
Alignm length: 331
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 223, 92

Conread position: 3-328
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 45

Conread position: 3-328
Cow position:
Alignm length: 340
Alignm identity: 226
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 124, 87

Conread position: 3-328
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 61, 93

Conread position: 3-328
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 126, 26

Conread position: 3-328
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 75

Conread position: 3-328
Cow position:
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 131

Conread position: 3-328
Cow position:
Alignm length: 331
Alignm identity: 218
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 221, 48

Conread position: 4-206
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 4-209
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 124, 57

Conread position: 4-224
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 203, 64

Conread position: 4-304
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 122, 74

Conread position: 4-321
Cow position:
Alignm length: 324
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 123, 147

Conread position: 4-324
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 125, 74

Conread position: 4-324
Cow position:
Alignm length: 328
Alignm identity: 220
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 192, 32

Conread position: 5-211
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 46

Conread position: 5-216
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 126, 102

Conread position: 5-328
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 106, 84

Conread position: 6-186
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 6-204
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 63

Conread position: 6-324
Cow position:
Alignm length: 325
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 241, 83

Conread position: 7-208
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 79

Conread position: 7-320
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 77

Conread position: 7-328
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 170, 71

Conread position: 10-207
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 68

Conread position: 10-304
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 118, 143

Conread position: 10-323
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 190, 140

Conread position: 13-318
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 186, 43

Conread position: 13-319
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 141, 0

Conread position: 15-223
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 154, 23

Conread position: 17-212
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 134

Conread position: 17-221
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 17-282
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 230, 138

Conread position: 17-304
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 230, 55

Conread position: 17-327
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 110, 53

Conread position: 18-277
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 229, 132

Conread position: 18-282
Cow position:
Alignm length: 269
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 229, 84

Conread position: 18-324
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 229, 28

Conread position: 20-211
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 132

Conread position: 21-205
Cow position:
Alignm length: 186
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 135

Conread position: 21-301
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 226, 134

Conread position: 22-328
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 23-328
Cow position:
Alignm length: 314
Alignm identity: 216
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 113, 42

Conread position: 28-324
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 23, 44

Conread position: 29-284
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 213, 17

Conread position: 30-327
Cow position:
Alignm length: 311
Alignm identity: 204
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 177, 40

Conread position: 36-199
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 37-304
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 210, 114

Conread position: 37-327
Cow position:
Alignm length: 301
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 42

Conread position: 38-262
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 57

Conread position: 39-327
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 101, 206

Conread position: 40-199
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 41-284
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 167, 47

Conread position: 49-272
Cow position:
Alignm length: 227
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 147, 32

Conread position: 49-328
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 90

Conread position: 52-255
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 58

Conread position: 65-323
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 122, 9

Conread position: 80-328
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 171, 66

Conread position: 81-318
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 175, 146

Conread position: 82-305
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 165, 47

Conread position: 83-320
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 164, 67

Conread position: 95-324
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 135

Conread position: 95-327
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 56

Conread position: 99-291
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 148, 57

Conread position: 139-323
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 101

Show alignments to all cow chromosomes.