Cow genome map
| Conread name: | rcsk07_i5.y1 |
| Conread position: | 1-324 |
| Cow position: | chr29:2744508-2744184 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 210, 68 |
| Conread position: | 3-164 |
| Cow position: | chr29:21265500-21265654 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 3-187 |
| Cow position: | chr29:4691920-4691733 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 127 |
| Conread position: | 3-193 |
| Cow position: | chr29:12679920-12680109 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 3-195 |
| Cow position: | chr29:17109737-17109920 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 3-201 |
| Cow position: | chr29:21924975-21925169 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-205 |
| Cow position: | chr29:477868-478067 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 3-205 |
| Cow position: | chr29:18338780-18338578 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-205 |
| Cow position: | chr29:37719676-37719870 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 124, 83 |
| Conread position: | 3-207 |
| Cow position: | chr29:19338745-19338952 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 111, 127 |
| Conread position: | 3-208 |
| Cow position: | chr29:11915582-11915786 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 3-209 |
| Cow position: | chr29:23743273-23743087 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-210 |
| Cow position: | chr29:603545-603353 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 3-210 |
| Cow position: | chr29:4065853-4066053 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 3-210 |
| Cow position: | chr29:31926524-31926321 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 126, 38 |
| Conread position: | 3-211 |
| Cow position: | chr29:3395876-3396075 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-211 |
| Cow position: | chr29:30545094-30544899 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-211 |
| Cow position: | chr29:45650577-45650374 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 3-212 |
| Cow position: | chr29:4194355-4194147 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 130, 47 |
| Conread position: | 3-237 |
| Cow position: | chr29:6472081-6472307 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-237 |
| Cow position: | chr29:32963320-32963547 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 3-237 |
| Cow position: | chr29:34736700-34736474 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-266 |
| Cow position: | chr29:42886146-42886412 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 67, 150 |
| Conread position: | 3-277 |
| Cow position: | chr29:29769580-29769316 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 249, 57 |
| Conread position: | 3-280 |
| Cow position: | chr29:12004999-12004724 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 75 |
| Conread position: | 3-281 |
| Cow position: | chr29:41747206-41747487 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 100 |
| Conread position: | 3-282 |
| Cow position: | chr29:22162485-22162209 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 244, 65 |
| Conread position: | 3-283 |
| Cow position: | chr29:699849-699574 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 3-284 |
| Cow position: | chr29:3502322-3502613 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 130 |
| Conread position: | 3-286 |
| Cow position: | chr29:21000407-21000681 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 236, 42 |
| Conread position: | 3-286 |
| Cow position: | chr29:21534913-21534628 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 18 |
| Conread position: | 3-289 |
| Cow position: | chr29:22714962-22714681 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 240, 140 |
| Conread position: | 3-298 |
| Cow position: | chr29:15738578-15738284 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 247, 22 |
| Conread position: | 3-304 |
| Cow position: | chr29:9139174-9139483 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 122, 91 |
| Conread position: | 3-304 |
| Cow position: | chr29:13639601-13639304 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 244, 62 |
| Conread position: | 3-304 |
| Cow position: | chr29:23984197-23983893 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 130, 148 |
| Conread position: | 3-304 |
| Cow position: | chr29:26615959-26615658 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 244, 79 |
| Conread position: | 3-304 |
| Cow position: | chr29:34744851-34744563 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 125, 66 |
| Conread position: | 3-304 |
| Cow position: | chr29:34773962-34773675 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 196, 48 |
| Conread position: | 3-304 |
| Cow position: | chr29:39567453-39567744 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 247, 88 |
| Conread position: | 3-305 |
| Cow position: | chr29:24103783-24103478 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 216, 152 |
| Conread position: | 3-306 |
| Cow position: | chr29:24952451-24952752 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 19 |
| Conread position: | 3-312 |
| Cow position: | chr29:13634534-13634227 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 251, 30 |
| Conread position: | 3-314 |
| Cow position: | chr29:11366012-11366312 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 184, 58 |
| Conread position: | 3-319 |
| Cow position: | chr29:650040-650356 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 191 |
| Conread position: | 3-320 |
| Cow position: | chr29:19389252-19389557 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 41 |
| Conread position: | 3-322 |
| Cow position: | chr29:13553898-13554217 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 85 |
| Conread position: | 3-323 |
| Cow position: | chr29:18695023-18695334 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 248, 88 |
| Conread position: | 3-323 |
| Cow position: | chr29:22613198-22613512 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 249, 10 |
| Conread position: | 3-324 |
| Cow position: | chr29:2984650-2984973 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 143, 75 |
| Conread position: | 3-324 |
| Cow position: | chr29:4520101-4520419 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 217, 75 |
| Conread position: | 3-324 |
| Cow position: | chr29:9709464-9709778 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 244, 55 |
| Conread position: | 3-324 |
| Cow position: | chr29:11005476-11005818 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 85, 253 |
| Conread position: | 3-324 |
| Cow position: | chr29:16609504-16609831 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 35 |
| Conread position: | 3-324 |
| Cow position: | chr29:19508726-19509029 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 247, 22 |
| Conread position: | 3-324 |
| Cow position: | chr29:19907122-19907438 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 205, 30 |
| Conread position: | 3-324 |
| Cow position: | chr29:34745889-34745576 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 3-327 |
| Cow position: | chr29:13127342-13127034 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 247, 43 |
| Conread position: | 3-327 |
| Cow position: | chr29:13372429-13372750 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 246, 79 |
| Conread position: | 3-327 |
| Cow position: | chr29:41530615-41530936 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 105, 75 |
| Conread position: | 3-328 |
| Cow position: | chr29:356092-356408 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 259, 75 |
| Conread position: | 3-328 |
| Cow position: | chr29:2275064-2274753 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-328 |
| Cow position: | chr29:4367486-4367813 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 75 |
| Conread position: | 3-328 |
| Cow position: | chr29:7408123-7407817 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 3-328 |
| Cow position: | chr29:11071938-11071598 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 3-328 |
| Cow position: | chr29:11787558-11787882 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 3-328 |
| Cow position: | chr29:12451137-12451461 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 108, 53 |
| Conread position: | 3-328 |
| Cow position: | chr29:17543216-17543527 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 126, 86 |
| Conread position: | 3-328 |
| Cow position: | chr29:18072695-18073026 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 150, 188 |
| Conread position: | 3-328 |
| Cow position: | chr29:18963506-18963821 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 247, 30 |
| Conread position: | 3-328 |
| Cow position: | chr29:29302888-29302572 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 247, 26 |
| Conread position: | 3-328 |
| Cow position: | chr29:32655659-32655348 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 3-328 |
| Cow position: | chr29:37961212-37960889 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 75 |
| Conread position: | 3-328 |
| Cow position: | chr29:39023572-39023251 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 247, 83 |
| Conread position: | 4-206 |
| Cow position: | chr29:19254056-19253856 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 4-212 |
| Cow position: | chr29:44135698-44135490 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 4-324 |
| Cow position: | chr29:16359380-16359704 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 212, 55 |
| Conread position: | 4-324 |
| Cow position: | chr29:22895483-22895810 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 4-327 |
| Cow position: | chr29:26129265-26129580 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 246, 42 |
| Conread position: | 5-201 |
| Cow position: | chr29:34609956-34609762 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 5-298 |
| Cow position: | chr29:18735875-18735583 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 245, 91 |
| Conread position: | 5-303 |
| Cow position: | chr29:28195749-28195460 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 116, 91 |
| Conread position: | 5-304 |
| Cow position: | chr29:17607184-17607480 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 242, 134 |
| Conread position: | 5-319 |
| Cow position: | chr29:11634590-11634901 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 212, 36 |
| Conread position: | 6-310 |
| Cow position: | chr29:29974810-29975106 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 222, 38 |
| Conread position: | 7-181 |
| Cow position: | chr29:1612809-1612636 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 99, 117 |
| Conread position: | 7-312 |
| Cow position: | chr29:4480406-4480102 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 245, 143 |
| Conread position: | 7-328 |
| Cow position: | chr29:22175460-22175768 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 231, 65 |
| Conread position: | 10-328 |
| Cow position: | chr29:19821069-19821370 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 201, 51 |
| Conread position: | 12-312 |
| Cow position: | chr29:14034552-14034255 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 13-204 |
| Cow position: | chr29:36404597-36404784 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 13-324 |
| Cow position: | chr29:12901337-12901035 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 139, 232 |
| Conread position: | 16-215 |
| Cow position: | chr29:41006337-41006545 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 150 |
| Conread position: | 16-304 |
| Cow position: | chr29:463875-463592 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 231, 64 |
| Conread position: | 17-208 |
| Cow position: | chr29:3711166-3711356 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 121, 73 |
| Conread position: | 17-324 |
| Cow position: | chr29:87241-86928 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 17-324 |
| Cow position: | chr29:868552-868858 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 114, 77 |
| Conread position: | 17-327 |
| Cow position: | chr29:6286378-6286075 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 61 |
| Conread position: | 18-324 |
| Cow position: | chr29:26985009-26985310 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 229, 15 |
| Conread position: | 21-199 |
| Cow position: | chr29:10475195-10475368 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 21-206 |
| Cow position: | chr29:36037483-36037665 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 125, 63 |
| Conread position: | 21-325 |
| Cow position: | chr29:16657469-16657783 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 22-283 |
| Cow position: | chr29:14484761-14484496 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 101, 58 |
| Conread position: | 27-283 |
| Cow position: | chr29:6337452-6337704 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 63 |
| Conread position: | 27-327 |
| Cow position: | chr29:38580765-38581065 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 183, 86 |
| Conread position: | 29-327 |
| Cow position: | chr29:26654249-26653958 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 97, 122 |
| Conread position: | 29-328 |
| Cow position: | chr29:709331-709046 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 41 |
| Conread position: | 30-304 |
| Cow position: | chr29:22778389-22778114 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 99, 121 |
| Conread position: | 36-324 |
| Cow position: | chr29:10153991-10153713 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 93, 44 |
| Conread position: | 38-207 |
| Cow position: | chr29:10818636-10818471 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 38-304 |
| Cow position: | chr29:3100461-3100205 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 113 |
| Conread position: | 38-308 |
| Cow position: | chr29:9718972-9718705 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 209, 116 |
| Conread position: | 46-320 |
| Cow position: | chr29:35442652-35442383 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 150, 15 |
| Conread position: | 52-254 |
| Cow position: | chr29:7392909-7393110 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 20, 163 |
| Conread position: | 54-319 |
| Cow position: | chr29:25924155-25923883 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 145, 195 |
| Conread position: | 61-298 |
| Cow position: | chr29:17301348-17301590 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 61-328 |
| Cow position: | chr29:16055315-16055045 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 83, 170 |
| Conread position: | 65-324 |
| Cow position: | chr29:23244057-23243795 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 91 |
| Conread position: | 69-321 |
| Cow position: | chr29:44682269-44682024 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 230, 79 |
| Conread position: | 73-304 |
| Cow position: | chr29:29942901-29942665 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 74-282 |
| Cow position: | chr29:10018407-10018619 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 77-327 |
| Cow position: | chr29:17296967-17297222 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 82-322 |
| Cow position: | chr29:26986773-26987010 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 165, 73 |
| Conread position: | 83-327 |
| Cow position: | chr29:12025629-12025390 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 84-324 |
| Cow position: | chr29:17154610-17154861 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 127, 66 |
| Conread position: | 85-321 |
| Cow position: | chr29:29795544-29795302 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 97-259 |
| Cow position: | chr29:45383981-45384141 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 150, 53 |
| Conread position: | 107-324 |
| Cow position: | chr29:7663404-7663187 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 140, 37 |
| Conread position: | 107-328 |
| Cow position: | chr29:6771998-6772217 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 143, 49 |
| Conread position: | 117-324 |
| Cow position: | chr29:14758987-14758780 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 123 |
| Conread position: | 122-328 |
| Cow position: | chr29:4444596-4444805 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 129, 19 |
| Conread position: | 130-328 |
| Cow position: | chr29:32645360-32645547 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 90, 40 |
Show alignments to all cow chromosomes.