Cow genome map

Conread name: rcsk07_i5.y1

Conread position: 1-324
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 210, 68

Conread position: 3-164
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 3-187
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 127

Conread position: 3-193
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 155, 0

Conread position: 3-195
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 3-201
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 3-205
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 167, 0

Conread position: 3-205
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-205
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 124, 83

Conread position: 3-207
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 127

Conread position: 3-208
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 152, 0

Conread position: 3-209
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 3-210
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 3-210
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 35

Conread position: 3-210
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 126, 38

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 126, 19

Conread position: 3-212
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 47

Conread position: 3-237
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-237
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 3-237
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 75, 0

Conread position: 3-266
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 67, 150

Conread position: 3-277
Cow position:
Alignm length: 280
Alignm identity: 187
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 249, 57

Conread position: 3-280
Cow position:
Alignm length: 290
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 75

Conread position: 3-281
Cow position:
Alignm length: 287
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 100

Conread position: 3-282
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 244, 65

Conread position: 3-283
Cow position:
Alignm length: 289
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 22

Conread position: 3-284
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 130

Conread position: 3-286
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 236, 42

Conread position: 3-286
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 18

Conread position: 3-289
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 240, 140

Conread position: 3-298
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 247, 22

Conread position: 3-304
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 91

Conread position: 3-304
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 244, 62

Conread position: 3-304
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 130, 148

Conread position: 3-304
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 244, 79

Conread position: 3-304
Cow position:
Alignm length: 304
Alignm identity: 199
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 66

Conread position: 3-304
Cow position:
Alignm length: 305
Alignm identity: 200
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 196, 48

Conread position: 3-304
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 247, 88

Conread position: 3-305
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 216, 152

Conread position: 3-306
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 19

Conread position: 3-312
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 251, 30

Conread position: 3-314
Cow position:
Alignm length: 319
Alignm identity: 229
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 184, 58

Conread position: 3-319
Cow position:
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 191

Conread position: 3-320
Cow position:
Alignm length: 325
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 41

Conread position: 3-322
Cow position:
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 85

Conread position: 3-323
Cow position:
Alignm length: 326
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 248, 88

Conread position: 3-323
Cow position:
Alignm length: 327
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 249, 10

Conread position: 3-324
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 143, 75

Conread position: 3-324
Cow position:
Alignm length: 326
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 217, 75

Conread position: 3-324
Cow position:
Alignm length: 329
Alignm identity: 216
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 244, 55

Conread position: 3-324
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 85, 253

Conread position: 3-324
Cow position:
Alignm length: 332
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 35

Conread position: 3-324
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 247, 22

Conread position: 3-324
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 205, 30

Conread position: 3-324
Cow position:
Alignm length: 329
Alignm identity: 216
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 68

Conread position: 3-327
Cow position:
Alignm length: 333
Alignm identity: 230
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 247, 43

Conread position: 3-327
Cow position:
Alignm length: 330
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 246, 79

Conread position: 3-327
Cow position:
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 75

Conread position: 3-328
Cow position:
Alignm length: 330
Alignm identity: 232
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 259, 75

Conread position: 3-328
Cow position:
Alignm length: 326
Alignm identity: 208
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 3-328
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 75

Conread position: 3-328
Cow position:
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 3-328
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 60, 18

Conread position: 3-328
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 25, 42

Conread position: 3-328
Cow position:
Alignm length: 331
Alignm identity: 228
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 108, 53

Conread position: 3-328
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 126, 86

Conread position: 3-328
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 150, 188

Conread position: 3-328
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 247, 30

Conread position: 3-328
Cow position:
Alignm length: 332
Alignm identity: 238
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 247, 26

Conread position: 3-328
Cow position:
Alignm length: 330
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 22

Conread position: 3-328
Cow position:
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 75

Conread position: 3-328
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 247, 83

Conread position: 4-206
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 87, 118

Conread position: 4-212
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 24, 122

Conread position: 4-324
Cow position:
Alignm length: 329
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 212, 55

Conread position: 4-324
Cow position:
Alignm length: 336
Alignm identity: 230
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 15, 35

Conread position: 4-327
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 246, 42

Conread position: 5-201
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 163, 0

Conread position: 5-298
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 245, 91

Conread position: 5-303
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 116, 91

Conread position: 5-304
Cow position:
Alignm length: 305
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 242, 134

Conread position: 5-319
Cow position:
Alignm length: 322
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 212, 36

Conread position: 6-310
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 222, 38

Conread position: 7-181
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 99, 117

Conread position: 7-312
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 245, 143

Conread position: 7-328
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 231, 65

Conread position: 10-328
Cow position:
Alignm length: 322
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 201, 51

Conread position: 12-312
Cow position:
Alignm length: 304
Alignm identity: 199
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 27

Conread position: 13-204
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 13-324
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 232

Conread position: 16-215
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 150

Conread position: 16-304
Cow position:
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 231, 64

Conread position: 17-208
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 73

Conread position: 17-324
Cow position:
Alignm length: 318
Alignm identity: 224
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 117, 10

Conread position: 17-324
Cow position:
Alignm length: 314
Alignm identity: 203
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 114, 77

Conread position: 17-327
Cow position:
Alignm length: 313
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 61

Conread position: 18-324
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 229, 15

Conread position: 21-199
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 66

Conread position: 21-206
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 63

Conread position: 21-325
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 30

Conread position: 22-283
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 101, 58

Conread position: 27-283
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 63

Conread position: 27-327
Cow position:
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 183, 86

Conread position: 29-327
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 97, 122

Conread position: 29-328
Cow position:
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 41

Conread position: 30-304
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 99, 121

Conread position: 36-324
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 44

Conread position: 38-207
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 38-304
Cow position:
Alignm length: 272
Alignm identity: 191
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 113

Conread position: 38-308
Cow position:
Alignm length: 274
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 209, 116

Conread position: 46-320
Cow position:
Alignm length: 281
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 150, 15

Conread position: 52-254
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 163

Conread position: 54-319
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 145, 195

Conread position: 61-298
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 90

Conread position: 61-328
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 170

Conread position: 65-324
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 91

Conread position: 69-321
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 230, 79

Conread position: 73-304
Cow position:
Alignm length: 240
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 81

Conread position: 74-282
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 51

Conread position: 77-327
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 76

Conread position: 82-322
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 165, 73

Conread position: 83-327
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 68

Conread position: 84-324
Cow position:
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 66

Conread position: 85-321
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 68

Conread position: 97-259
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 53

Conread position: 107-324
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 37

Conread position: 107-328
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 143, 49

Conread position: 117-324
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 123

Conread position: 122-328
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 129, 19

Conread position: 130-328
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 40

Show alignments to all cow chromosomes.