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Cow genome map

           
Conread name:
           
rcsk07_i5.y1
        

               
Conread position:
               
1-209
               

               
Cow position:
               
chr8:34410226-34410428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr8:8481173-8480973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
202, 54
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr8:42607493-42607296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr8:54070530-54070845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr8:36648684-36648474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
121, 150
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr8:18730213-18730543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
147, 220
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr8:9962795-9962617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr8:21729022-21729205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr8:9624543-9624725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr8:36055627-36055433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 148
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr8:29028304-29028111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr8:33993942-33994135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr8:19818343-19818148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr8:20108008-20107809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 99
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr8:38464791-38464984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr8:45686652-45686459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr8:53587690-53587489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr8:38572502-38572293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr8:32295961-32295752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
52, 152
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr8:20306761-20306956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr8:24546310-24546504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr8:24952117-24952319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr8:28412834-28412636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
134, 56
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr8:44664805-44664597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:2814398-2814603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:2953412-2953611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:10802391-10802185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 149
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:24933930-24934133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:29416556-29416358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:31317317-31317526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:33286946-33287141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:35436837-35436634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:39985959-39985761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:47484141-47483941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr8:52195698-52195899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr8:3704400-3704601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr8:17669964-17669760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr8:32491333-32491538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
198, 75
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr8:52925940-52925737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr8:1596394-1596188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 66
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr8:12303224-12303432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr8:25572830-25573035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr8:40888422-40888217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr8:60463294-60463502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
197, 81
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr8:40033039-40032830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr8:4563650-4563434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
197, 147
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr8:11225870-11225659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr8:3147761-3147555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr8:3433653-3433868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr8:24201680-24201896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr8:28263140-28262925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr8:38358203-38358426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr8:2974420-2974655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr8:28509714-28509479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
143, 208
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr8:4205703-4205936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr8:21826973-21826737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr8:1834699-1834942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr8:5485103-5484848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
125, 151
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr8:36464983-36465227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
124, 53
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr8:25349486-25349736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
244, 147
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr8:39936280-39936543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 225
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr8:6233120-6232866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
247, 67
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr8:1303683-1303953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
205, 75
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr8:39630548-39630823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
244, 147
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr8:57389067-57389334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
243, 87
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr8:24471425-24471703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr8:24371938-24371661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
244, 67
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr8:225587-225313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr8:29765033-29765314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
126, 97
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr8:48775593-48775873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 82
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr8:53485484-53485753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
247, 83
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr8:31253589-31253868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr8:9517403-9517117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr8:20673999-20673723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr8:24390421-24390138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr8:1023737-1024028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr8:1999399-1999704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
125, 75
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr8:8987162-8986870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
243, 40
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr8:9131149-9130853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
244, 79
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr8:15395077-15394786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 67
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr8:35990824-35991125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
242, 140
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr8:47328121-47328417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
226, 126
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr8:10297961-10297661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
176, 152
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr8:7149908-7149623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr8:4924342-4924651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
244, 152
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr8:42139267-42138958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
243, 73
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr8:38357072-38356765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr8:47342512-47342829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr8:14947528-14947202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
120, 237
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr8:22755799-22756114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
184, 77
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr8:26228735-26229050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
198, 54
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr8:8134730-8134405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 227
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr8:31313670-31313995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr8:38780488-38780801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
239, 43
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr8:42578297-42577996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
316, 14
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:8902192-8901886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 153
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:17103642-17103331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
261, 83
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:18081314-18081629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
244, 97
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:18207369-18207047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 156
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:19642248-19642564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:20683750-20684068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:24237535-24237847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
211, 10
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:24834505-24834798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:37571929-37571608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:42575472-42575783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 75
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:42762649-42762335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:47295754-47296065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:49265531-49265206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 92
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:50953343-50953653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr8:60320301-60320613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
208, 86
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr8:3015249-3015579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
204, 36
               

               
Conread position:
               
3-327
               

               
Cow position:
               
chr8:4940532-4940221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
136, 77
               

               
Conread position:
               
3-327
               

               
Cow position:
               
chr8:12058490-12058821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
3-327
               

               
Cow position:
               
chr8:31646229-31645923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
260, 71
               

               
Conread position:
               
3-327
               

               
Cow position:
               
chr8:44703867-44704189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr8:1107414-1107089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 130
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr8:9811570-9811900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr8:25871502-25871827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 67
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr8:30135694-30136015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 97
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr8:34287704-34288024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 122
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr8:35218128-35218465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 87
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr8:36364270-36363964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr8:48763338-48763647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr8:51959626-51959309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
126, 69
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr8:10176366-10176188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr8:54572422-54572598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr8:55925977-55926212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr8:38893788-38894056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
210, 68
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr8:39721446-39721713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
195, 82
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr8:554407-554134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
242, 66
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr8:3975998-3976285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
119, 9
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr8:16487528-16487248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 85
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr8:22273635-22273922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 150
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr8:10456246-10456542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
243, 82
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr8:21077373-21077678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
256, 68
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr8:20157982-20157664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
146, 72
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr8:17199659-17199333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr8:13975673-13975990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr8:4591293-4591098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr8:45664554-45664754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr8:44000709-44000506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr8:34477895-34478137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr8:37122751-37123040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
261, 57
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr8:8010683-8010995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
245, 73
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr8:51361340-51361653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
234, 132
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr8:26922418-26922723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr8:43904561-43904869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr8:55304855-55305181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 140
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr8:2897840-2897560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
241, 94
               

               
Conread position:
               
6-321
               

               
Cow position:
               
chr8:18057518-18057839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr8:9236757-9236439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
205, 23
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr8:11637901-11638116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr8:32621215-32620908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr8:37147904-37148100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
122, 76
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr8:39808346-39808551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr8:538131-537814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
114, 55
               

               
Conread position:
               
13-322
               

               
Cow position:
               
chr8:45486397-45486691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
13-324
               

               
Cow position:
               
chr8:51905257-51904942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 65
               

               
Conread position:
               
13-328
               

               
Cow position:
               
chr8:36505155-36505475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
14-328
               

               
Cow position:
               
chr8:31690590-31690909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 0
               

               
Conread position:
               
17-198
               

               
Cow position:
               
chr8:47679206-47679385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
17-277
               

               
Cow position:
               
chr8:59438492-59438232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
230, 106
               

               
Conread position:
               
17-305
               

               
Cow position:
               
chr8:29625170-29624893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
17-306
               

               
Cow position:
               
chr8:31297060-31297344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
182, 21
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chr8:39592378-39592684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
229, 79
               

               
Conread position:
               
17-328
               

               
Cow position:
               
chr8:28221775-28221467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 5
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr8:10434602-10434765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr8:16023850-16023589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 126
               

               
Conread position:
               
19-324
               

               
Cow position:
               
chr8:42794519-42794226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
209, 59
               

               
Conread position:
               
20-210
               

               
Cow position:
               
chr8:5979737-5979920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
20-324
               

               
Cow position:
               
chr8:6485141-6484835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
217, 65
               

               
Conread position:
               
21-303
               

               
Cow position:
               
chr8:57208684-57208404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
102, 127
               

               
Conread position:
               
21-327
               

               
Cow position:
               
chr8:33693297-33693605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 198
               

               
Conread position:
               
22-324
               

               
Cow position:
               
chr8:11896015-11896299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
24-324
               

               
Cow position:
               
chr8:23179749-23179449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
222, 131
               

               
Conread position:
               
27-282
               

               
Cow position:
               
chr8:28313923-28313669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
220, 32
               

               
Conread position:
               
27-323
               

               
Cow position:
               
chr8:10263364-10263070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
220, 11
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr8:39544578-39544762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
29-212
               

               
Cow position:
               
chr8:6431287-6431466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
30-324
               

               
Cow position:
               
chr8:39174445-39174146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
217, 125
               

               
Conread position:
               
30-327
               

               
Cow position:
               
chr8:47136207-47135917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
220, 103
               

               
Conread position:
               
36-219
               

               
Cow position:
               
chr8:634120-633938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
37-293
               

               
Cow position:
               
chr8:40549795-40549550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
213, 33
               

               
Conread position:
               
37-304
               

               
Cow position:
               
chr8:8190256-8189989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
210, 62
               

               
Conread position:
               
37-305
               

               
Cow position:
               
chr8:43027848-43027578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
210, 113
               

               
Conread position:
               
37-324
               

               
Cow position:
               
chr8:20131636-20131913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
92, 166
               

               
Conread position:
               
38-323
               

               
Cow position:
               
chr8:11278304-11278010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
38-327
               

               
Cow position:
               
chr8:61128893-61128598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
40-321
               

               
Cow position:
               
chr8:21222447-21222721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
41-284
               

               
Cow position:
               
chr8:25847431-25847671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
158, 54
               

               
Conread position:
               
41-306
               

               
Cow position:
               
chr8:12213827-12214085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
208, 71
               

               
Conread position:
               
42-211
               

               
Cow position:
               
chr8:29029470-29029298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
46-201
               

               
Cow position:
               
chr8:34400759-34400916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 107
               

               
Conread position:
               
46-280
               

               
Cow position:
               
chr8:13738317-13738549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
46-321
               

               
Cow position:
               
chr8:20150740-20150465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 95
               

               
Conread position:
               
46-328
               

               
Cow position:
               
chr8:35519848-35520133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
51-293
               

               
Cow position:
               
chr8:19512641-19512397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
51-318
               

               
Cow position:
               
chr8:20682228-20682483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
159, 53
               

               
Conread position:
               
53-324
               

               
Cow position:
               
chr8:29935748-29936013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
161, 18
               

               
Conread position:
               
54-212
               

               
Cow position:
               
chr8:9985439-9985593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
154, 83
               

               
Conread position:
               
56-281
               

               
Cow position:
               
chr8:39845453-39845669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
194, 33
               

               
Conread position:
               
62-322
               

               
Cow position:
               
chr8:21281898-21282151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 152
               

               
Conread position:
               
64-198
               

               
Cow position:
               
chr8:54061107-54061242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
64-328
               

               
Cow position:
               
chr8:57387757-57388036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 185
               

               
Conread position:
               
66-210
               

               
Cow position:
               
chr8:32093714-32093858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
69-327
               

               
Cow position:
               
chr8:20783425-20783165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
70-327
               

               
Cow position:
               
chr8:37347615-37347356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
74-321
               

               
Cow position:
               
chr8:11782827-11783078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
176, 51
               

               
Conread position:
               
75-308
               

               
Cow position:
               
chr8:16507943-16507711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
77-328
               

               
Cow position:
               
chr8:59507231-59506978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
78-317
               

               
Cow position:
               
chr8:29150023-29149776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
78-320
               

               
Cow position:
               
chr8:49300746-49300514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
186, 124
               

               
Conread position:
               
78-328
               

               
Cow position:
               
chr8:27681789-27682035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
83-221
               

               
Cow position:
               
chr8:12538757-12538620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
83-305
               

               
Cow position:
               
chr8:6073961-6073740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
84-328
               

               
Cow position:
               
chr8:60170497-60170741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
173, 133
               

               
Conread position:
               
96-308
               

               
Cow position:
               
chr8:45447235-45447017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
96-322
               

               
Cow position:
               
chr8:25388009-25388232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
107-328
               

               
Cow position:
               
chr8:13144562-13144343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
113-328
               

               
Cow position:
               
chr8:31815162-31814946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
117-328
               

               
Cow position:
               
chr8:942699-942909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
122-328
               

               
Cow position:
               
chr8:18368198-18367985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
122-328
               

               
Cow position:
               
chr8:20053029-20052821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
126-328
               

               
Cow position:
               
chr8:45987905-45987699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
128-328
               

               
Cow position:
               
chr8:33510718-33510522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
135, 92
               

               
Conread position:
               
132-328
               

               
Cow position:
               
chr8:33842655-33842854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 103
               

               
Conread position:
               
144-328
               

               
Cow position:
               
chr8:34318162-34317972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 65
               
Show alignments to all cow chromosomes.