Non-Coding RNA Search

Cow genome map


           Conread name:
           rcsk07_i5.y1
        

               Conread position:
               1-186
               

               Cow position:
               chrX:12249597-12249774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               5, 55
               

               Conread position:
               1-199
               

               Cow position:
               chrX:44737200-44737000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 146
               

               Conread position:
               1-208
               

               Cow position:
               chrX:33466405-33466603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-208
               

               Cow position:
               chrX:33827230-33827023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-210
               

               Cow position:
               chrX:34401789-34401994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-324
               

               Cow position:
               chrX:25713588-25713907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               2-328
               

               Cow position:
               chrX:10959608-10959279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               189, 148
               

               Conread position:
               3-187
               

               Cow position:
               chrX:9997540-9997362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               3-194
               

               Cow position:
               chrX:38967444-38967628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               121, 67
               

               Conread position:
               3-197
               

               Cow position:
               chrX:157982-157791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-199
               

               Cow position:
               chrX:2147128-2147330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               3-200
               

               Cow position:
               chrX:33020279-33020470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               3-205
               

               Cow position:
               chrX:2186052-2186243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               3-205
               

               Cow position:
               chrX:21816052-21816255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               3-205
               

               Cow position:
               chrX:29542425-29542228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               3-205
               

               Cow position:
               chrX:35388112-35387911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               3-205
               

               Cow position:
               chrX:35609780-35609980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               125, 75
               

               Conread position:
               3-206
               

               Cow position:
               chrX:24424594-24424397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               3-206
               

               Cow position:
               chrX:32020328-32020128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 67
               

               Conread position:
               3-207
               

               Cow position:
               chrX:21593077-21593281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               126, 148
               

               Conread position:
               3-208
               

               Cow position:
               chrX:42282226-42282422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               3-208
               

               Cow position:
               chrX:42381306-42381107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               150, 87
               

               Conread position:
               3-208
               

               Cow position:
               chrX:43647948-43647753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               3-209
               

               Cow position:
               chrX:28580016-28580222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-209
               

               Cow position:
               chrX:29509650-29509445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               125, 77
               

               Conread position:
               3-209
               

               Cow position:
               chrX:34441657-34441456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               121, 26
               

               Conread position:
               3-209
               

               Cow position:
               chrX:42994408-42994608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               126, 43
               

               Conread position:
               3-210
               

               Cow position:
               chrX:8682136-8681931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-210
               

               Cow position:
               chrX:11981924-11982133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 95
               

               Conread position:
               3-210
               

               Cow position:
               chrX:15139750-15139549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               3-210
               

               Cow position:
               chrX:40647771-40647982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               87, 113
               

               Conread position:
               3-211
               

               Cow position:
               chrX:678774-678575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               3-211
               

               Cow position:
               chrX:21672345-21672553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               121, 148
               

               Conread position:
               3-211
               

               Cow position:
               chrX:42461952-42461747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               3-212
               

               Cow position:
               chrX:33855439-33855232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               199, 87
               

               Conread position:
               3-212
               

               Cow position:
               chrX:37836381-37836588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               3-214
               

               Cow position:
               chrX:13245385-13245595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               3-215
               

               Cow position:
               chrX:23497871-23497667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               3-215
               

               Cow position:
               chrX:41743706-41743913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               126, 75
               

               Conread position:
               3-215
               

               Cow position:
               chrX:46315587-46315376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               3-225
               

               Cow position:
               chrX:43408791-43409017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               91, 67
               

               Conread position:
               3-232
               

               Cow position:
               chrX:35273145-35273372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 148
               

               Conread position:
               3-237
               

               Cow position:
               chrX:16416302-16416536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               203, 14
               

               Conread position:
               3-237
               

               Cow position:
               chrX:42874771-42875010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               122, 151
               

               Conread position:
               3-238
               

               Cow position:
               chrX:2648557-2648322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               199, 66
               

               Conread position:
               3-248
               

               Cow position:
               chrX:17271495-17271251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               193, 163
               

               Conread position:
               3-256
               

               Cow position:
               chrX:11674858-11675106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               3-259
               

               Cow position:
               chrX:14924794-14925043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               123, 26
               

               Conread position:
               3-259
               

               Cow position:
               chrX:30862096-30862359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               143, 92
               

               Conread position:
               3-261
               

               Cow position:
               chrX:25232384-25232638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               240, 77
               

               Conread position:
               3-262
               

               Cow position:
               chrX:5017614-5017365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               244, 77
               

               Conread position:
               3-269
               

               Cow position:
               chrX:35681140-35681395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               120, 50
               

               Conread position:
               3-273
               

               Cow position:
               chrX:44396808-44397073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               3-281
               

               Cow position:
               chrX:42500285-42500566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               133, 75
               

               Conread position:
               3-282
               

               Cow position:
               chrX:619214-618933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               244, 152
               

               Conread position:
               3-282
               

               Cow position:
               chrX:26876088-26875812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               244, 18
               

               Conread position:
               3-282
               

               Cow position:
               chrX:40557882-40557610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               244, 62
               

               Conread position:
               3-283
               

               Cow position:
               chrX:10831703-10831420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               195, 147
               

               Conread position:
               3-283
               

               Cow position:
               chrX:27509226-27508952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               244, 77
               

               Conread position:
               3-285
               

               Cow position:
               chrX:1810368-1810088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 42
               

               Conread position:
               3-286
               

               Cow position:
               chrX:11746635-11746916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 75
               

               Conread position:
               3-288
               

               Cow position:
               chrX:8517670-8517947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               207, 32
               

               Conread position:
               3-298
               

               Cow position:
               chrX:5638376-5638084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               48, 95
               

               Conread position:
               3-298
               

               Cow position:
               chrX:11455259-11454957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               3-298
               

               Cow position:
               chrX:43527297-43527593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               135, 67
               

               Conread position:
               3-304
               

               Cow position:
               chrX:488283-488595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 67
               

               Conread position:
               3-304
               

               Cow position:
               chrX:7571700-7571996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               249, 75
               

               Conread position:
               3-304
               

               Cow position:
               chrX:9201340-9201639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               249, 152
               

               Conread position:
               3-304
               

               Cow position:
               chrX:11856223-11856521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               126, 19
               

               Conread position:
               3-304
               

               Cow position:
               chrX:13868487-13868793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               123, 77
               

               Conread position:
               3-304
               

               Cow position:
               chrX:14884168-14883865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               248, 147
               

               Conread position:
               3-304
               

               Cow position:
               chrX:21642685-21642391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               130, 30
               

               Conread position:
               3-304
               

               Cow position:
               chrX:27680195-27680489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               244, 86
               

               Conread position:
               3-304
               

               Cow position:
               chrX:29289370-29289669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               124, 141
               

               Conread position:
               3-304
               

               Cow position:
               chrX:31250183-31250479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               240, 104
               

               Conread position:
               3-304
               

               Cow position:
               chrX:31949137-31948844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               244, 79
               

               Conread position:
               3-304
               

               Cow position:
               chrX:37119393-37119684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               88, 54
               

               Conread position:
               3-304
               

               Cow position:
               chrX:40481078-40480781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               130, 14
               

               Conread position:
               3-304
               

               Cow position:
               chrX:42171506-42171203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               242, 147
               

               Conread position:
               3-304
               

               Cow position:
               chrX:47344088-47344387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               247, 102
               

               Conread position:
               3-305
               

               Cow position:
               chrX:17541757-17542054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               244, 98
               

               Conread position:
               3-306
               

               Cow position:
               chrX:39558553-39558255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               244, 77
               

               Conread position:
               3-312
               

               Cow position:
               chrX:40269270-40269592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               36, 155
               

               Conread position:
               3-319
               

               Cow position:
               chrX:18456186-18456508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               129, 272
               

               Conread position:
               3-321
               

               Cow position:
               chrX:2467673-2467993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               120, 150
               

               Conread position:
               3-321
               

               Cow position:
               chrX:34663050-34662737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               125, 48
               

               Conread position:
               3-322
               

               Cow position:
               chrX:15329446-15329752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               213, 75
               

               Conread position:
               3-322
               

               Cow position:
               chrX:17631009-17630691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               211, 71
               

               Conread position:
               3-322
               

               Cow position:
               chrX:25419368-25419043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 243
               

               Conread position:
               3-322
               

               Cow position:
               chrX:26625883-26625561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               98, 142
               

               Conread position:
               3-323
               

               Cow position:
               chrX:6278712-6278387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               120, 154
               

               Conread position:
               3-323
               

               Cow position:
               chrX:7497037-7497353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               242, 67
               

               Conread position:
               3-323
               

               Cow position:
               chrX:13323203-13322876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               203, 66
               

               Conread position:
               3-323
               

               Cow position:
               chrX:15049279-15049601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 76
               

               Conread position:
               3-323
               

               Cow position:
               chrX:17231528-17231846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               242, 113
               

               Conread position:
               3-323
               

               Cow position:
               chrX:18695126-18694820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               247, 73
               

               Conread position:
               3-323
               

               Cow position:
               chrX:28787157-28787460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               159, 54
               

               Conread position:
               3-323
               

               Cow position:
               chrX:40788998-40789317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 139
               

               Conread position:
               3-324
               

               Cow position:
               chrX:1616254-1615931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 147
               

               Conread position:
               3-324
               

               Cow position:
               chrX:3154453-3154131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               194, 79
               

               Conread position:
               3-324
               

               Cow position:
               chrX:6690454-6690148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               128, 73
               

               Conread position:
               3-324
               

               Cow position:
               chrX:7721778-7722100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               81, 145
               

               Conread position:
               3-324
               

               Cow position:
               chrX:8925499-8925811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               205, 73
               

               Conread position:
               3-324
               

               Cow position:
               chrX:9041436-9041132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               247, 92
               

               Conread position:
               3-324
               

               Cow position:
               chrX:10412192-10411874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               211, 10
               

               Conread position:
               3-324
               

               Cow position:
               chrX:20792024-20791703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               204, 75
               

               Conread position:
               3-324
               

               Cow position:
               chrX:22821841-22822158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               259, 121
               

               Conread position:
               3-324
               

               Cow position:
               chrX:23514224-23513905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               3-324
               

               Cow position:
               chrX:26440986-26440676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               120, 91
               

               Conread position:
               3-324
               

               Cow position:
               chrX:29602037-29601716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               244, 14
               

               Conread position:
               3-324
               

               Cow position:
               chrX:38006974-38006658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               244, 145
               

               Conread position:
               3-324
               

               Cow position:
               chrX:38094732-38094408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               3-324
               

               Cow position:
               chrX:41560445-41560154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               223, 73
               

               Conread position:
               3-324
               

               Cow position:
               chrX:41884624-41884300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               244, 152
               

               Conread position:
               3-324
               

               Cow position:
               chrX:46587611-46587934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               129, 85
               

               Conread position:
               3-327
               

               Cow position:
               chrX:1978303-1978622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               75, 124
               

               Conread position:
               3-327
               

               Cow position:
               chrX:4044057-4043752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               277, 100
               

               Conread position:
               3-327
               

               Cow position:
               chrX:8730873-8731208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               96, 151
               

               Conread position:
               3-327
               

               Cow position:
               chrX:8797041-8797364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 149
               

               Conread position:
               3-327
               

               Cow position:
               chrX:16284153-16283828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               155, 79
               

               Conread position:
               3-327
               

               Cow position:
               chrX:17042484-17042797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               3-327
               

               Cow position:
               chrX:28929635-28929955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               225, 65
               

               Conread position:
               3-327
               

               Cow position:
               chrX:30133530-30133203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               3-327
               

               Cow position:
               chrX:33639765-33640090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               148, 67
               

               Conread position:
               3-327
               

               Cow position:
               chrX:38549242-38549562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               196, 120
               

               Conread position:
               3-327
               

               Cow position:
               chrX:38963900-38964223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               188, 87
               

               Conread position:
               3-327
               

               Cow position:
               chrX:42247390-42247067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               208, 91
               

               Conread position:
               3-327
               

               Cow position:
               chrX:46073027-46072702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               244, 97
               

               Conread position:
               3-327
               

               Cow position:
               chrX:48195247-48194920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               125, 75
               

               Conread position:
               3-328
               

               Cow position:
               chrX:2029183-2029501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               152, 122
               

               Conread position:
               3-328
               

               Cow position:
               chrX:2300727-2301040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               211, 73
               

               Conread position:
               3-328
               

               Cow position:
               chrX:2786754-2786441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               219, 15
               

               Conread position:
               3-328
               

               Cow position:
               chrX:7425259-7425581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               3-328
               

               Cow position:
               chrX:11313987-11313669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               3-328
               

               Cow position:
               chrX:11717989-11717667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               207, 65
               

               Conread position:
               3-328
               

               Cow position:
               chrX:17743854-17744172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               149, 183
               

               Conread position:
               3-328
               

               Cow position:
               chrX:19930449-19930761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               133, 75
               

               Conread position:
               3-328
               

               Cow position:
               chrX:20801573-20801885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               303, 48
               

               Conread position:
               3-328
               

               Cow position:
               chrX:21664930-21664605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 18
               

               Conread position:
               3-328
               

               Cow position:
               chrX:24132357-24132035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               117, 16
               

               Conread position:
               3-328
               

               Cow position:
               chrX:25337973-25338303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 235
               

               Conread position:
               3-328
               

               Cow position:
               chrX:27176526-27176197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               95, 157
               

               Conread position:
               3-328
               

               Cow position:
               chrX:28111300-28111625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 87
               

               Conread position:
               3-328
               

               Cow position:
               chrX:29032208-29032526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               211, 67
               

               Conread position:
               3-328
               

               Cow position:
               chrX:30162790-30163121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               211, 88
               

               Conread position:
               3-328
               

               Cow position:
               chrX:32743332-32743649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               247, 77
               

               Conread position:
               3-328
               

               Cow position:
               chrX:33803219-33802892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               149, 268
               

               Conread position:
               3-328
               

               Cow position:
               chrX:36840665-36840979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               59, 123
               

               Conread position:
               3-328
               

               Cow position:
               chrX:38936494-38936816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               213, 67
               

               Conread position:
               3-328
               

               Cow position:
               chrX:42011073-42011397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 130
               

               Conread position:
               4-187
               

               Cow position:
               chrX:9635386-9635212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               4-195
               

               Cow position:
               chrX:25411631-25411822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 56
               

               Conread position:
               4-199
               

               Cow position:
               chrX:12826542-12826732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               4-205
               

               Cow position:
               chrX:24200984-24201177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               4-207
               

               Cow position:
               chrX:39938728-39938530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               4-209
               

               Cow position:
               chrX:37232204-37232409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               195, 151
               

               Conread position:
               4-213
               

               Cow position:
               chrX:160241-160033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               4-237
               

               Cow position:
               chrX:17662802-17662568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               213, 147
               

               Conread position:
               4-273
               

               Cow position:
               chrX:41167170-41166902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               125, 74
               

               Conread position:
               4-327
               

               Cow position:
               chrX:10302133-10302456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 73
               

               Conread position:
               4-327
               

               Cow position:
               chrX:29120851-29121162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               243, 66
               

               Conread position:
               4-327
               

               Cow position:
               chrX:45404039-45403710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               124, 147
               

               Conread position:
               4-328
               

               Cow position:
               chrX:630513-630194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               5-208
               

               Cow position:
               chrX:12018071-12018285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 158
               

               Conread position:
               5-324
               

               Cow position:
               chrX:14599325-14599645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               205, 145
               

               Conread position:
               5-328
               

               Cow position:
               chrX:4865047-4865349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               259, 73
               

               Conread position:
               6-264
               

               Cow position:
               chrX:151698-151953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               126, 45
               

               Conread position:
               6-323
               

               Cow position:
               chrX:15305491-15305185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               242, 32
               

               Conread position:
               6-324
               

               Cow position:
               chrX:31340501-31340822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 194
               

               Conread position:
               6-328
               

               Cow position:
               chrX:6563309-6563635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               7-241
               

               Cow position:
               chrX:38840686-38840916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               7-245
               

               Cow position:
               chrX:280928-281161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               203, 63
               

               Conread position:
               7-259
               

               Cow position:
               chrX:28836103-28835859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               204, 14
               

               Conread position:
               7-319
               

               Cow position:
               chrX:18216074-18216373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               116, 204
               

               Conread position:
               7-324
               

               Cow position:
               chrX:11655886-11656193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               257, 143
               

               Conread position:
               9-324
               

               Cow position:
               chrX:47177953-47178256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               224, 29
               

               Conread position:
               10-198
               

               Cow position:
               chrX:36283146-36283336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               122, 143
               

               Conread position:
               10-211
               

               Cow position:
               chrX:37048779-37048580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               10-304
               

               Cow position:
               chrX:17725775-17726066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               237, 60
               

               Conread position:
               10-323
               

               Cow position:
               chrX:24259781-24259468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               240, 64
               

               Conread position:
               10-324
               

               Cow position:
               chrX:40035644-40035328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               59, 87
               

               Conread position:
               10-327
               

               Cow position:
               chrX:917571-917253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 132
               

               Conread position:
               11-328
               

               Cow position:
               chrX:35925765-35926073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               13-323
               

               Cow position:
               chrX:39546170-39545868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 65
               

               Conread position:
               13-326
               

               Cow position:
               chrX:25571190-25570880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               234, 65
               

               Conread position:
               15-324
               

               Cow position:
               chrX:32431432-32431736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               231, 50
               

               Conread position:
               17-212
               

               Cow position:
               chrX:38439282-38439476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               17-237
               

               Cow position:
               chrX:36961443-36961668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               17-283
               

               Cow position:
               chrX:6234641-6234379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               112, 59
               

               Conread position:
               17-283
               

               Cow position:
               chrX:11589781-11589518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               111, 42
               

               Conread position:
               17-298
               

               Cow position:
               chrX:44961555-44961836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               112, 78
               

               Conread position:
               17-304
               

               Cow position:
               chrX:35224107-35224387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               229, 24
               

               Conread position:
               17-304
               

               Cow position:
               chrX:37781310-37781018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               79, 136
               

               Conread position:
               17-323
               

               Cow position:
               chrX:33000711-33001016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               230, 90
               

               Conread position:
               17-324
               

               Cow position:
               chrX:33493582-33493888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               230, 117
               

               Conread position:
               17-324
               

               Cow position:
               chrX:45110463-45110768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               197, 94
               

               Conread position:
               17-327
               

               Cow position:
               chrX:13382133-13382440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               109, 134
               

               Conread position:
               17-327
               

               Cow position:
               chrX:34502726-34503035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               212, 133
               

               Conread position:
               17-328
               

               Cow position:
               chrX:9161395-9161691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               18-321
               

               Cow position:
               chrX:1055581-1055272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               187, 61
               

               Conread position:
               19-303
               

               Cow position:
               chrX:44657155-44656867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               116, 77
               

               Conread position:
               19-304
               

               Cow position:
               chrX:24366024-24365730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               19-323
               

               Cow position:
               chrX:48248634-48248933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               20-187
               

               Cow position:
               chrX:24149450-24149614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               21-327
               

               Cow position:
               chrX:42235722-42235409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               23-210
               

               Cow position:
               chrX:31256681-31256860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               23-328
               

               Cow position:
               chrX:29761872-29761568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               188, 47
               

               Conread position:
               24-211
               

               Cow position:
               chrX:25966855-25967032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               27-282
               

               Cow position:
               chrX:36067837-36068084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               220, 59
               

               Conread position:
               27-304
               

               Cow position:
               chrX:32820847-32821119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               96, 9
               

               Conread position:
               30-237
               

               Cow position:
               chrX:34792490-34792284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               169, 69
               

               Conread position:
               33-328
               

               Cow position:
               chrX:38999667-38999964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               98, 19
               

               Conread position:
               36-304
               

               Cow position:
               chrX:22921140-22921412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               37-209
               

               Cow position:
               chrX:46029154-46028988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               170, 32
               

               Conread position:
               37-221
               

               Cow position:
               chrX:38188254-38188071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               37-274
               

               Cow position:
               chrX:46146733-46146500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               194, 39
               

               Conread position:
               37-304
               

               Cow position:
               chrX:36060979-36061251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 116
               

               Conread position:
               37-321
               

               Cow position:
               chrX:30922009-30922280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               37-324
               

               Cow position:
               chrX:6407376-6407655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               206, 63
               

               Conread position:
               37-327
               

               Cow position:
               chrX:22387420-22387135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               37-328
               

               Cow position:
               chrX:16514437-16514151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 33
               

               Conread position:
               37-328
               

               Cow position:
               chrX:31252245-31252523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               222, 14
               

               Conread position:
               38-292
               

               Cow position:
               chrX:30005097-30005347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               166, 40
               

               Conread position:
               38-327
               

               Cow position:
               chrX:25388409-25388127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               41, 139
               

               Conread position:
               41-211
               

               Cow position:
               chrX:23666954-23667121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               89, 51
               

               Conread position:
               46-205
               

               Cow position:
               chrX:23254377-23254215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               47-323
               

               Cow position:
               chrX:27227962-27228237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 5
               

               Conread position:
               50-305
               

               Cow position:
               chrX:45976759-45977018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               50-328
               

               Cow position:
               chrX:45633411-45633672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               250, 28
               

               Conread position:
               54-234
               

               Cow position:
               chrX:5047059-5046876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               54-327
               

               Cow position:
               chrX:25193505-25193772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               55-209
               

               Cow position:
               chrX:8913765-8913916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               152, 50
               

               Conread position:
               55-209
               

               Cow position:
               chrX:8915509-8915660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               152, 50
               

               Conread position:
               55-327
               

               Cow position:
               chrX:39415524-39415255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               157, 35
               

               Conread position:
               56-215
               

               Cow position:
               chrX:29055966-29056117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               57-205
               

               Cow position:
               chrX:6479845-6479988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               61-261
               

               Cow position:
               chrX:18417740-18417545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               189, 11
               

               Conread position:
               61-304
               

               Cow position:
               chrX:20584170-20584419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               25, 96
               

               Conread position:
               63-304
               

               Cow position:
               chrX:21986443-21986200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 93
               

               Conread position:
               68-282
               

               Cow position:
               chrX:13785508-13785291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               179, 87
               

               Conread position:
               69-324
               

               Cow position:
               chrX:34313889-34314136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               195, 38
               

               Conread position:
               69-328
               

               Cow position:
               chrX:29680404-29680145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               178, 81
               

               Conread position:
               70-322
               

               Cow position:
               chrX:616405-616149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               129, 80
               

               Conread position:
               70-328
               

               Cow position:
               chrX:11614556-11614809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               73-324
               

               Cow position:
               chrX:21566262-21566519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               56, 155
               

               Conread position:
               76-327
               

               Cow position:
               chrX:11085194-11084949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               78-324
               

               Cow position:
               chrX:19878915-19879150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               169, 23
               

               Conread position:
               78-327
               

               Cow position:
               chrX:41027022-41027274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               134, 47
               

               Conread position:
               78-328
               

               Cow position:
               chrX:40692887-40692635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               79-293
               

               Cow position:
               chrX:27450133-27449918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               168, 113
               

               Conread position:
               80-324
               

               Cow position:
               chrX:41070804-41071042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               81-324
               

               Cow position:
               chrX:40685463-40685216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               130, 74
               

               Conread position:
               82-209
               

               Cow position:
               chrX:31273113-31273240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               84-305
               

               Cow position:
               chrX:26493766-26493541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 140
               

               Conread position:
               84-328
               

               Cow position:
               chrX:6041341-6041093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               163, 14
               

               Conread position:
               90-328
               

               Cow position:
               chrX:6656263-6656498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               160, 43
               

               Conread position:
               93-324
               

               Cow position:
               chrX:26881688-26881453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               154, 57
               

               Conread position:
               104-283
               

               Cow position:
               chrX:20790812-20790983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               113-314
               

               Cow position:
               chrX:25441091-25440896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               187, 30
               

               Conread position:
               117-322
               

               Cow position:
               chrX:19678363-19678162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               120, 92
               

               Conread position:
               121-328
               

               Cow position:
               chrX:12725645-12725846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               122-324
               

               Cow position:
               chrX:27771669-27771466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               122-328
               

               Cow position:
               chrX:22326027-22326235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               140, 87
               

               Conread position:
               124-328
               

               Cow position:
               chrX:7344998-7345199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               126, 9
               

               Conread position:
               129-328
               

               Cow position:
               chrX:26619192-26619002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               77, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-186
Cow position:	chrX:12249597-12249774 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	138
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	5, 55
Conread position:	1-199
Cow position:	chrX:44737200-44737000 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	138
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	69, 146
Conread position:	1-208
Cow position:	chrX:33466405-33466603 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	144
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	69, 0
Conread position:	1-210
Cow position:	chrX:34401789-34401994 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	155
Alignm E-value:	7e-36
Alignm gaps (pig, cow):	50, 0
Conread position:	2-324
Cow position:	chrX:25713588-25713907 (view UCSC Genome Browser custom track)
Alignm length:	331
Alignm identity:	231
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	9, 26
Conread position:	2-328
Cow position:	chrX:10959608-10959279 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	225
Alignm E-value:	8e-38
Alignm gaps (pig, cow):	189, 148
Conread position:	3-187
Cow position:	chrX:9997540-9997362 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	136
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	62, 0
Conread position:	3-194
Cow position:	chrX:38967444-38967628 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	140
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	121, 67
Conread position:	3-197
Cow position:	chrX:157982-157791 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	140
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	18, 0
Conread position:	3-199
Cow position:	chrX:2147128-2147330 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	150
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	13, 19
Conread position:	3-200
Cow position:	chrX:33020279-33020470 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	141
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	75, 0
Conread position:	3-205
Cow position:	chrX:2186052-2186243 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	144
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	92, 0
Conread position:	3-206
Cow position:	chrX:24424594-24424397 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	145
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	13, 19
Conread position:	3-207
Cow position:	chrX:21593077-21593281 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	149
Alignm E-value:	5e-33
Alignm gaps (pig, cow):	126, 148
Conread position:	3-208
Cow position:	chrX:42282226-42282422 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	145
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	83, 0
Conread position:	3-209
Cow position:	chrX:28580016-28580222 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	143
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	0, 0
Conread position:	3-210
Cow position:	chrX:8682136-8681931 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	155
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	50, 0
Conread position:	3-211
Cow position:	chrX:678774-678575 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	153
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	109, 0
Conread position:	3-212
Cow position:	chrX:33855439-33855232 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	151
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	199, 87
Conread position:	3-214
Cow position:	chrX:13245385-13245595 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	149
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	44, 0