Cow genome map
| Conread name: | rcsk07_o8.y1 |
| Conread position: | 1-146 |
| Cow position: | chr1:101008035-101007891 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-147 |
| Cow position: | chr1:1348992-1348847 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 1-152 |
| Cow position: | chr1:34857135-34856984 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-153 |
| Cow position: | chr1:42316797-42316639 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 1-171 |
| Cow position: | chr1:77657367-77657545 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 71 |
| Conread position: | 1-203 |
| Cow position: | chr1:53704099-53703882 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 1-220 |
| Cow position: | chr1:58195271-58195047 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 71 |
| Conread position: | 1-242 |
| Cow position: | chr1:30034122-30034363 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-242 |
| Cow position: | chr1:49962243-49961997 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 5, 90 |
| Conread position: | 1-292 |
| Cow position: | chr1:4368514-4368218 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 1-319 |
| Cow position: | chr1:42053752-42053440 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 5, 76 |
| Conread position: | 1-320 |
| Cow position: | chr1:53397555-53397882 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-322 |
| Cow position: | chr1:38382309-38381985 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 1-322 |
| Cow position: | chr1:40530662-40530351 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 85 |
| Conread position: | 1-322 |
| Cow position: | chr1:81859647-81859334 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-323 |
| Cow position: | chr1:1801719-1802033 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 5, 76 |
| Conread position: | 1-324 |
| Cow position: | chr1:82937013-82936691 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-328 |
| Cow position: | chr1:71135729-71136051 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 84 |
| Conread position: | 1-330 |
| Cow position: | chr1:874210-874546 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 5, 257 |
| Conread position: | 2-157 |
| Cow position: | chr1:22835949-22836103 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-323 |
| Cow position: | chr1:4374765-4374447 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 75 |
| Conread position: | 2-327 |
| Cow position: | chr1:97622635-97622302 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 4-152 |
| Cow position: | chr1:53328227-53328080 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 4-157 |
| Cow position: | chr1:5024515-5024360 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 4-315 |
| Cow position: | chr1:26896248-26895940 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 158, 81 |
| Conread position: | 4-322 |
| Cow position: | chr1:52036877-52036549 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 51, 254 |
| Conread position: | 4-323 |
| Cow position: | chr1:30531198-30530878 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 158, 70 |
| Conread position: | 4-323 |
| Cow position: | chr1:65390397-65390720 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 158, 76 |
| Conread position: | 4-325 |
| Cow position: | chr1:46218149-46218477 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 4-326 |
| Cow position: | chr1:16839153-16839480 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 4-328 |
| Cow position: | chr1:99808160-99807824 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 4-332 |
| Cow position: | chr1:14528633-14528293 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 41, 254 |
| Conread position: | 5-152 |
| Cow position: | chr1:68951219-68951365 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 5-157 |
| Cow position: | chr1:26729012-26729163 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 5-157 |
| Cow position: | chr1:63042023-63041872 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 5-189 |
| Cow position: | chr1:68827402-68827214 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-234 |
| Cow position: | chr1:53458282-53458516 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 5-234 |
| Cow position: | chr1:71797319-71797090 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 166, 56 |
| Conread position: | 5-237 |
| Cow position: | chr1:101787151-101786907 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 5-242 |
| Cow position: | chr1:3739577-3739815 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 152, 72 |
| Conread position: | 5-242 |
| Cow position: | chr1:96184432-96184190 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 5-242 |
| Cow position: | chr1:101822920-101822680 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 5-243 |
| Cow position: | chr1:61724444-61724206 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 5-252 |
| Cow position: | chr1:3790478-3790228 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 117, 72 |
| Conread position: | 5-258 |
| Cow position: | chr1:4662475-4662222 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 123, 72 |
| Conread position: | 5-261 |
| Cow position: | chr1:43353073-43352814 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 164, 75 |
| Conread position: | 5-269 |
| Cow position: | chr1:54732867-54732611 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 193, 72 |
| Conread position: | 5-276 |
| Cow position: | chr1:24202153-24201886 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 165, 76 |
| Conread position: | 5-281 |
| Cow position: | chr1:22221281-22221000 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-314 |
| Cow position: | chr1:88970655-88970943 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 5-317 |
| Cow position: | chr1:55260854-55260542 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 5-320 |
| Cow position: | chr1:54207244-54206928 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 41, 142 |
| Conread position: | 5-321 |
| Cow position: | chr1:79844045-79844358 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 157, 75 |
| Conread position: | 5-322 |
| Cow position: | chr1:11873778-11873467 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 150, 70 |
| Conread position: | 5-322 |
| Cow position: | chr1:22516120-22516434 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 5-322 |
| Cow position: | chr1:33716797-33717118 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 5-322 |
| Cow position: | chr1:49181637-49181951 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 84 |
| Conread position: | 5-322 |
| Cow position: | chr1:53312986-53313303 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 172, 75 |
| Conread position: | 5-322 |
| Cow position: | chr1:71666599-71666281 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 5-322 |
| Cow position: | chr1:77620122-77620444 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-322 |
| Cow position: | chr1:96018848-96019157 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 5-323 |
| Cow position: | chr1:41181418-41181739 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 153, 75 |
| Conread position: | 5-323 |
| Cow position: | chr1:68717404-68717085 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 175, 69 |
| Conread position: | 5-323 |
| Cow position: | chr1:76020104-76019799 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-323 |
| Cow position: | chr1:101551026-101551355 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 5-324 |
| Cow position: | chr1:10778150-10778461 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 74 |
| Conread position: | 5-324 |
| Cow position: | chr1:21092668-21092987 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-324 |
| Cow position: | chr1:36613698-36613380 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 153, 54 |
| Conread position: | 5-324 |
| Cow position: | chr1:51983175-51983479 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 5-324 |
| Cow position: | chr1:53650483-53650789 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 231, 75 |
| Conread position: | 5-324 |
| Cow position: | chr1:56718891-56719215 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 75 |
| Conread position: | 5-325 |
| Cow position: | chr1:26702621-26702311 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 162, 75 |
| Conread position: | 5-325 |
| Cow position: | chr1:99642783-99642470 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 69 |
| Conread position: | 5-326 |
| Cow position: | chr1:45007046-45007366 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 79 |
| Conread position: | 5-327 |
| Cow position: | chr1:37309940-37309616 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 5-328 |
| Cow position: | chr1:23623723-23624073 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 48, 261 |
| Conread position: | 5-328 |
| Cow position: | chr1:66356139-66355814 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 5-328 |
| Cow position: | chr1:99628247-99627918 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 5-330 |
| Cow position: | chr1:43380441-43380127 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 49 |
| Conread position: | 5-330 |
| Cow position: | chr1:81228753-81228439 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 159, 49 |
| Conread position: | 5-334 |
| Cow position: | chr1:79002380-79002056 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 5-365 |
| Cow position: | chr1:73443047-73442680 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 6-147 |
| Cow position: | chr1:48346006-48346146 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 6-157 |
| Cow position: | chr1:65394115-65394265 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 6-173 |
| Cow position: | chr1:15386081-15385912 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-178 |
| Cow position: | chr1:66242233-66242059 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 152, 71 |
| Conread position: | 6-236 |
| Cow position: | chr1:8130122-8129891 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 166, 69 |
| Conread position: | 6-242 |
| Cow position: | chr1:92433598-92433836 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 44 |
| Conread position: | 6-320 |
| Cow position: | chr1:1981534-1981223 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 153, 77 |
| Conread position: | 6-320 |
| Cow position: | chr1:81356126-81355815 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 77 |
| Conread position: | 6-320 |
| Cow position: | chr1:89342411-89342104 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 6-321 |
| Cow position: | chr1:12596327-12596012 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 161, 71 |
| Conread position: | 6-321 |
| Cow position: | chr1:29671933-29671628 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 197, 69 |
| Conread position: | 6-321 |
| Cow position: | chr1:63596481-63596165 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 171, 49 |
| Conread position: | 6-322 |
| Cow position: | chr1:8845455-8845776 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 6-322 |
| Cow position: | chr1:31405589-31405909 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr1:67188587-67188265 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 156, 273 |
| Conread position: | 6-322 |
| Cow position: | chr1:72012229-72011917 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 6-324 |
| Cow position: | chr1:20385048-20384725 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 153, 71 |
| Conread position: | 6-324 |
| Cow position: | chr1:85028538-85028853 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 162, 72 |
| Conread position: | 6-325 |
| Cow position: | chr1:44769537-44769217 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 6-325 |
| Cow position: | chr1:81161589-81161906 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 6-329 |
| Cow position: | chr1:89766696-89766380 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 246, 71 |
| Conread position: | 6-330 |
| Cow position: | chr1:55357709-55357384 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 6-335 |
| Cow position: | chr1:57957280-57956952 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 6-364 |
| Cow position: | chr1:85865375-85865717 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 156, 40 |
| Conread position: | 7-157 |
| Cow position: | chr1:57969499-57969344 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 7-321 |
| Cow position: | chr1:97761207-97761512 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 148, 70 |
| Conread position: | 7-322 |
| Cow position: | chr1:52753592-52753273 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 7-326 |
| Cow position: | chr1:51393988-51394318 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 76 |
| Conread position: | 8-157 |
| Cow position: | chr1:4384879-4385033 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 8-173 |
| Cow position: | chr1:78795174-78795009 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 156, 69 |
| Conread position: | 8-203 |
| Cow position: | chr1:99792368-99792566 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 150, 69 |
| Conread position: | 8-232 |
| Cow position: | chr1:18023727-18023506 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 154, 26 |
| Conread position: | 8-242 |
| Cow position: | chr1:89349561-89349795 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 8-320 |
| Cow position: | chr1:74822029-74822346 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 156, 69 |
| Conread position: | 8-322 |
| Cow position: | chr1:54174518-54174836 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 8-324 |
| Cow position: | chr1:42874368-42874052 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 75 |
| Conread position: | 8-336 |
| Cow position: | chr1:96558921-96559251 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 11-235 |
| Cow position: | chr1:24412799-24413019 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 11-236 |
| Cow position: | chr1:102266690-102266455 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 11-322 |
| Cow position: | chr1:68279990-68280305 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 151, 66 |
| Conread position: | 11-323 |
| Cow position: | chr1:22629050-22628745 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 147, 66 |
| Conread position: | 11-325 |
| Cow position: | chr1:99136847-99136535 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 6 |
| Conread position: | 12-157 |
| Cow position: | chr1:85163249-85163105 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 13-289 |
| Cow position: | chr1:20950282-20950557 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 149, 67 |
| Conread position: | 24-237 |
| Cow position: | chr1:26322916-26322696 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 133, 51 |
| Conread position: | 27-329 |
| Cow position: | chr1:71325649-71325349 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 36-287 |
| Cow position: | chr1:21221347-21221095 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 43-336 |
| Cow position: | chr1:43821991-43822286 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 119, 37 |
| Conread position: | 44-282 |
| Cow position: | chr1:51359221-51358978 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 98, 118 |
| Conread position: | 44-317 |
| Cow position: | chr1:61534754-61534480 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 118, 39 |
| Conread position: | 44-323 |
| Cow position: | chr1:8242993-8243268 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 133, 33 |
| Conread position: | 44-324 |
| Cow position: | chr1:7583345-7583618 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 96, 30 |
| Conread position: | 44-325 |
| Cow position: | chr1:31414350-31414065 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 44-330 |
| Cow position: | chr1:23041192-23041473 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 118, 36 |
| Conread position: | 48-316 |
| Cow position: | chr1:57390731-57390469 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 110, 32 |
| Conread position: | 48-316 |
| Cow position: | chr1:57541880-57541614 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 48-325 |
| Cow position: | chr1:88911276-88910994 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 116, 35 |
| Conread position: | 48-328 |
| Cow position: | chr1:32360513-32360242 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 243, 29 |
| Conread position: | 49-237 |
| Cow position: | chr1:43789302-43789501 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 55-330 |
| Cow position: | chr1:7657693-7657408 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 111, 25 |
| Conread position: | 79-325 |
| Cow position: | chr1:57119693-57119445 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 80-323 |
| Cow position: | chr1:67014036-67014279 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 85-242 |
| Cow position: | chr1:37726718-37726557 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 90-327 |
| Cow position: | chr1:95215516-95215284 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 93-323 |
| Cow position: | chr1:23488847-23488615 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 154 |
| Conread position: | 108-322 |
| Cow position: | chr1:80988027-80988239 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 136 |
| Conread position: | 110-336 |
| Cow position: | chr1:50765042-50765265 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 118-328 |
| Cow position: | chr1:79663976-79663763 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 135 |
| Conread position: | 128-329 |
| Cow position: | chr1:66138018-66138220 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 147 |
| Conread position: | 129-330 |
| Cow position: | chr1:26688779-26688574 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 121 |
| Conread position: | 160-322 |
| Cow position: | chr1:634924-635084 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 169-365 |
| Cow position: | chr1:81579507-81579700 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 81 |
Show alignments to all cow chromosomes.