Cow genome map

Conread name: rcsk07_o8.y1

Conread position: 1-125
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 83

Conread position: 1-173
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 86

Conread position: 1-234
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 78

Conread position: 1-322
Cow position:
Alignm length: 331
Alignm identity: 225
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 5, 77

Conread position: 1-322
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 5, 90

Conread position: 1-322
Cow position:
Alignm length: 335
Alignm identity: 227
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 5, 84

Conread position: 1-323
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 5, 77

Conread position: 1-324
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 5, 82

Conread position: 1-325
Cow position:
Alignm length: 341
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 84

Conread position: 1-328
Cow position:
Alignm length: 341
Alignm identity: 244
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 5, 85

Conread position: 1-328
Cow position:
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 86

Conread position: 1-328
Cow position:
Alignm length: 341
Alignm identity: 227
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 5, 75

Conread position: 1-328
Cow position:
Alignm length: 342
Alignm identity: 240
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 5, 115

Conread position: 1-330
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 67

Conread position: 1-333
Cow position:
Alignm length: 348
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 5, 88

Conread position: 2-321
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 158, 75

Conread position: 2-322
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 87

Conread position: 2-323
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 170, 78

Conread position: 4-323
Cow position:
Alignm length: 329
Alignm identity: 219
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 158, 74

Conread position: 4-329
Cow position:
Alignm length: 333
Alignm identity: 230
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 154, 73

Conread position: 5-157
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 5-165
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 5-186
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 162, 72

Conread position: 5-219
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 153, 75

Conread position: 5-231
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 153, 75

Conread position: 5-237
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 145, 50

Conread position: 5-242
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 83

Conread position: 5-269
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 198, 72

Conread position: 5-313
Cow position:
Alignm length: 323
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 78

Conread position: 5-319
Cow position:
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 72

Conread position: 5-320
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 117, 76

Conread position: 5-321
Cow position:
Alignm length: 320
Alignm identity: 219
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 160, 73

Conread position: 5-321
Cow position:
Alignm length: 323
Alignm identity: 227
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 159, 72

Conread position: 5-321
Cow position:
Alignm length: 325
Alignm identity: 230
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 152, 72

Conread position: 5-321
Cow position:
Alignm length: 322
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 139, 72

Conread position: 5-322
Cow position:
Alignm length: 324
Alignm identity: 219
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 153, 69

Conread position: 5-322
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 33

Conread position: 5-322
Cow position:
Alignm length: 324
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 157, 76

Conread position: 5-323
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 153, 75

Conread position: 5-323
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 172, 72

Conread position: 5-323
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 134, 66

Conread position: 5-323
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 75

Conread position: 5-323
Cow position:
Alignm length: 327
Alignm identity: 226
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 41, 51

Conread position: 5-323
Cow position:
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 157, 72

Conread position: 5-324
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 142, 72

Conread position: 5-324
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 157, 72

Conread position: 5-325
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 76

Conread position: 5-325
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 157, 78

Conread position: 5-327
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 170, 72

Conread position: 5-328
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 42, 84

Conread position: 5-328
Cow position:
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 51

Conread position: 5-330
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 157, 75

Conread position: 5-330
Cow position:
Alignm length: 347
Alignm identity: 252
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 87

Conread position: 5-335
Cow position:
Alignm length: 344
Alignm identity: 246
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 40, 81

Conread position: 6-165
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 6-211
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 71

Conread position: 6-242
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 156, 71

Conread position: 6-242
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 71

Conread position: 6-271
Cow position:
Alignm length: 274
Alignm identity: 199
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 44, 77

Conread position: 6-272
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 160, 71

Conread position: 6-320
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 71, 78

Conread position: 6-321
Cow position:
Alignm length: 321
Alignm identity: 214
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 152, 77

Conread position: 6-322
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 156, 256

Conread position: 6-322
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 158, 74

Conread position: 6-322
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 156, 77

Conread position: 6-323
Cow position:
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 74

Conread position: 6-324
Cow position:
Alignm length: 338
Alignm identity: 230
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 149, 71

Conread position: 6-324
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 71

Conread position: 6-328
Cow position:
Alignm length: 336
Alignm identity: 233
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 71, 258

Conread position: 6-328
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 81

Conread position: 6-330
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 156, 73

Conread position: 6-333
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 152, 74

Conread position: 7-157
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 7-211
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 74

Conread position: 7-211
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 152, 74

Conread position: 7-289
Cow position:
Alignm length: 289
Alignm identity: 204
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 151, 68

Conread position: 7-321
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 73, 253

Conread position: 7-321
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 71

Conread position: 7-325
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 67

Conread position: 7-326
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 132, 69

Conread position: 8-321
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 156, 72

Conread position: 8-324
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 152, 77

Conread position: 11-242
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 67

Conread position: 11-324
Cow position:
Alignm length: 322
Alignm identity: 224
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 65, 242

Conread position: 11-324
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 65, 71

Conread position: 12-324
Cow position:
Alignm length: 326
Alignm identity: 234
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 146, 65

Conread position: 12-324
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 132, 36

Conread position: 40-242
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 16

Conread position: 44-328
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 120, 36

Conread position: 47-322
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 108, 38

Conread position: 48-323
Cow position:
Alignm length: 290
Alignm identity: 213
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 114, 29

Conread position: 48-328
Cow position:
Alignm length: 285
Alignm identity: 211
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 110, 32

Conread position: 49-324
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 115, 34

Conread position: 52-332
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 25

Conread position: 53-324
Cow position:
Alignm length: 277
Alignm identity: 209
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 109, 21

Conread position: 54-321
Cow position:
Alignm length: 289
Alignm identity: 196
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 12

Conread position: 57-324
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 19

Conread position: 59-323
Cow position:
Alignm length: 274
Alignm identity: 200
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 103, 21

Conread position: 60-331
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 238, 21

Conread position: 77-314
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 203

Conread position: 77-323
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 185, 6

Conread position: 77-331
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 151

Conread position: 83-237
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 85-328
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 77, 96

Conread position: 90-325
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 96

Conread position: 109-321
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 131

Conread position: 111-322
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 134

Conread position: 118-325
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 32

Conread position: 118-328
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 13

Conread position: 169-328
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 122, 74

Conread position: 175-331
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 179-328
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 66

Show alignments to all cow chromosomes.