Cow genome map

Conread name: rcsk07_o8.y1

Conread position: 1-147
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 5, 80

Conread position: 1-173
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 83

Conread position: 1-268
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 77

Conread position: 1-309
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 80

Conread position: 1-322
Cow position:
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 83

Conread position: 1-322
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 5, 56

Conread position: 1-328
Cow position:
Alignm length: 343
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 89

Conread position: 1-328
Cow position:
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 90

Conread position: 1-330
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 87

Conread position: 4-211
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 158, 76

Conread position: 4-211
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 158, 73

Conread position: 4-269
Cow position:
Alignm length: 275
Alignm identity: 181
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 78

Conread position: 4-321
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 53

Conread position: 4-322
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 158, 73

Conread position: 4-323
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 158, 76

Conread position: 4-323
Cow position:
Alignm length: 328
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 34

Conread position: 4-326
Cow position:
Alignm length: 334
Alignm identity: 220
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 85

Conread position: 5-153
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 78

Conread position: 5-157
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 32

Conread position: 5-171
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 5-189
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 152, 76

Conread position: 5-242
Cow position:
Alignm length: 245
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 153, 71

Conread position: 5-317
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 162, 72

Conread position: 5-317
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 78

Conread position: 5-317
Cow position:
Alignm length: 317
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 172, 79

Conread position: 5-320
Cow position:
Alignm length: 325
Alignm identity: 219
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 131, 75

Conread position: 5-320
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 51

Conread position: 5-321
Cow position:
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 72

Conread position: 5-322
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 76

Conread position: 5-322
Cow position:
Alignm length: 323
Alignm identity: 215
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 142, 72

Conread position: 5-323
Cow position:
Alignm length: 333
Alignm identity: 237
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 42, 61

Conread position: 5-323
Cow position:
Alignm length: 324
Alignm identity: 235
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 159, 72

Conread position: 5-323
Cow position:
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 75

Conread position: 5-324
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 71

Conread position: 5-328
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 80

Conread position: 5-328
Cow position:
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 78

Conread position: 5-330
Cow position:
Alignm length: 333
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 76

Conread position: 6-157
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 6-171
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 77

Conread position: 6-172
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 77

Conread position: 6-189
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 50

Conread position: 6-229
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 77

Conread position: 6-242
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 173, 71

Conread position: 6-269
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 69

Conread position: 6-320
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 152, 74

Conread position: 6-321
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 152, 247

Conread position: 6-321
Cow position:
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 9

Conread position: 6-322
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 149, 50

Conread position: 6-324
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 65

Conread position: 6-324
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 61, 73

Conread position: 6-325
Cow position:
Alignm length: 323
Alignm identity: 233
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 238, 74

Conread position: 6-329
Cow position:
Alignm length: 328
Alignm identity: 227
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 46, 50

Conread position: 7-235
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 76

Conread position: 7-324
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 71

Conread position: 7-329
Cow position:
Alignm length: 347
Alignm identity: 244
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 79

Conread position: 7-331
Cow position:
Alignm length: 335
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 14

Conread position: 8-322
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 89, 69

Conread position: 8-323
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 147, 69

Conread position: 9-315
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 149, 68

Conread position: 11-157
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 11-259
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 147, 72

Conread position: 11-325
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 36, 77

Conread position: 11-330
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 78

Conread position: 15-157
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 47

Conread position: 44-323
Cow position:
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 36

Conread position: 45-325
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 112, 35

Conread position: 48-328
Cow position:
Alignm length: 287
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 114, 32

Conread position: 48-328
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 35

Conread position: 48-328
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 122, 21

Conread position: 48-330
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 32

Conread position: 51-328
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 33, 199

Conread position: 54-323
Cow position:
Alignm length: 275
Alignm identity: 195
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 121, 26

Conread position: 60-328
Cow position:
Alignm length: 273
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 114, 20

Conread position: 61-322
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 101, 19

Conread position: 62-323
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 115, 18

Conread position: 83-322
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 167

Conread position: 84-331
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 171

Conread position: 94-323
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 108, 154

Conread position: 118-321
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 137

Conread position: 166-328
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 81

Conread position: 166-333
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 131, 77

Show alignments to all cow chromosomes.