Cow genome map

Conread name: rcsk07_o8.y1

Conread position: 1-153
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 81

Conread position: 1-157
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 89

Conread position: 1-157
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 86

Conread position: 1-157
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 75

Conread position: 1-172
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 5, 77

Conread position: 1-193
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 77

Conread position: 1-288
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 81

Conread position: 1-323
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 269

Conread position: 1-325
Cow position:
Alignm length: 349
Alignm identity: 244
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 86

Conread position: 1-327
Cow position:
Alignm length: 342
Alignm identity: 229
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 89

Conread position: 1-328
Cow position:
Alignm length: 344
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 86

Conread position: 1-328
Cow position:
Alignm length: 341
Alignm identity: 235
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 5, 81

Conread position: 1-328
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 5, 56

Conread position: 1-331
Cow position:
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 21

Conread position: 4-173
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 54

Conread position: 4-297
Cow position:
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 158, 76

Conread position: 4-313
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 158, 73

Conread position: 4-328
Cow position:
Alignm length: 339
Alignm identity: 234
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 79

Conread position: 4-328
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 18

Conread position: 5-157
Cow position:
Alignm length: 153
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 5-157
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 5-173
Cow position:
Alignm length: 169
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-242
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 170, 72

Conread position: 5-252
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 157, 72

Conread position: 5-260
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 81

Conread position: 5-269
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 153, 49

Conread position: 5-286
Cow position:
Alignm length: 288
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 157, 66

Conread position: 5-315
Cow position:
Alignm length: 326
Alignm identity: 215
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 83

Conread position: 5-320
Cow position:
Alignm length: 328
Alignm identity: 223
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 108, 75

Conread position: 5-321
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 157, 49

Conread position: 5-322
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 51

Conread position: 5-322
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 159, 72

Conread position: 5-322
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 82

Conread position: 5-323
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 157, 72

Conread position: 5-323
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 153, 72

Conread position: 5-323
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 53

Conread position: 5-323
Cow position:
Alignm length: 324
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 130, 61

Conread position: 5-323
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 164, 72

Conread position: 5-324
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 286, 72

Conread position: 5-324
Cow position:
Alignm length: 328
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 72

Conread position: 5-325
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 16

Conread position: 5-325
Cow position:
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 77

Conread position: 5-326
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 78

Conread position: 5-331
Cow position:
Alignm length: 338
Alignm identity: 230
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 157, 72

Conread position: 5-331
Cow position:
Alignm length: 344
Alignm identity: 232
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 153, 72

Conread position: 5-331
Cow position:
Alignm length: 334
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 157, 49

Conread position: 5-333
Cow position:
Alignm length: 338
Alignm identity: 231
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 72, 77

Conread position: 6-157
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 6-173
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 152, 75

Conread position: 6-242
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 75

Conread position: 6-319
Cow position:
Alignm length: 323
Alignm identity: 230
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 152, 60

Conread position: 6-321
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 76

Conread position: 6-321
Cow position:
Alignm length: 322
Alignm identity: 227
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 158, 71

Conread position: 6-321
Cow position:
Alignm length: 327
Alignm identity: 223
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 152, 37

Conread position: 6-322
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 50

Conread position: 6-322
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 51

Conread position: 6-322
Cow position:
Alignm length: 325
Alignm identity: 219
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 156, 71

Conread position: 6-324
Cow position:
Alignm length: 321
Alignm identity: 223
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 292, 74

Conread position: 6-324
Cow position:
Alignm length: 335
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 81

Conread position: 6-325
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 151, 71

Conread position: 6-328
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 39, 79

Conread position: 6-332
Cow position:
Alignm length: 346
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 255

Conread position: 7-232
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 156, 73

Conread position: 7-320
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 51

Conread position: 8-171
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 44, 72

Conread position: 8-173
Cow position:
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 69

Conread position: 8-269
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 165, 69

Conread position: 8-284
Cow position:
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 56

Conread position: 8-336
Cow position:
Alignm length: 348
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 75

Conread position: 9-234
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 149, 58

Conread position: 11-151
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 11-173
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 11-278
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 158, 68

Conread position: 11-321
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 72

Conread position: 11-324
Cow position:
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 72

Conread position: 11-328
Cow position:
Alignm length: 337
Alignm identity: 218
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 78

Conread position: 12-328
Cow position:
Alignm length: 346
Alignm identity: 245
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 71

Conread position: 13-157
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 17-324
Cow position:
Alignm length: 316
Alignm identity: 222
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 72

Conread position: 21-323
Cow position:
Alignm length: 313
Alignm identity: 208
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 59

Conread position: 39-291
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 7

Conread position: 44-328
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 207

Conread position: 44-329
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 35

Conread position: 45-335
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 10

Conread position: 47-252
Cow position:
Alignm length: 208
Alignm identity: 153
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 130, 36

Conread position: 47-323
Cow position:
Alignm length: 282
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 112, 33

Conread position: 47-324
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 33

Conread position: 47-332
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 51, 29

Conread position: 48-330
Cow position:
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 35

Conread position: 50-242
Cow position:
Alignm length: 199
Alignm identity: 162
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 118, 30

Conread position: 50-322
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 112, 33

Conread position: 56-325
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 124, 24

Conread position: 61-242
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 62-234
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 18

Conread position: 62-328
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 141, 18

Conread position: 74-331
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 88, 9

Conread position: 77-323
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 174

Conread position: 78-329
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 26

Conread position: 83-322
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 61

Conread position: 87-328
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 68, 164

Conread position: 120-357
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 42, 65

Conread position: 121-323
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 73

Conread position: 166-326
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 77

Conread position: 174-328
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 71

Conread position: 179-328
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 66

Conread position: 182-328
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 62

Show alignments to all cow chromosomes.