Cow genome map


           Conread name:
           rcsk07_o8.y1
        

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 61
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               5, 81
               

               Conread position:
               2-157
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               4-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               4-173
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               160, 68
               

               Conread position:
               4-321
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               40, 85
               

               Conread position:
               4-321
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               4-322
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               158, 73
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               158, 76
               

               Conread position:
               5-131
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               5-157
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               5-157
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               5-171
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 73
               

               Conread position:
               5-173
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               5-173
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 73
               

               Conread position:
               5-206
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               157, 72
               

               Conread position:
               5-222
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               114, 72
               

               Conread position:
               5-236
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 75
               

               Conread position:
               5-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               139, 72
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               159, 75
               

               Conread position:
               5-250
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               152, 48
               

               Conread position:
               5-311
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               135, 72
               

               Conread position:
               5-319
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               152, 70
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               153, 75
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               157, 72
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               171, 75
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               154, 72
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               172, 72
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               57, 74
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               157, 71
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               39, 82
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               40, 82
               

               Conread position:
               5-331
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               153, 62
               

               Conread position:
               5-333
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               5-357
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 72
               

               Conread position:
               6-131
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               6-157
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 76
               

               Conread position:
               6-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-237
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               74, 100
               

               Conread position:
               6-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               162, 71
               

               Conread position:
               6-289
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               166, 71
               

               Conread position:
               6-289
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-321
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               157, 260
               

               Conread position:
               6-321
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               152, 42
               

               Conread position:
               6-321
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-323
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-328
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               6-329
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               39, 77
               

               Conread position:
               6-330
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               6-331
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               39, 79
               

               Conread position:
               7-153
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               7-289
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 73
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               151, 76
               

               Conread position:
               7-328
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               291, 70
               

               Conread position:
               7-328
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               75, 30
               

               Conread position:
               8-320
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               164, 69
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               8-323
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               154, 72
               

               Conread position:
               8-325
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               195, 68
               

               Conread position:
               11-317
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               11-319
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               153, 69
               

               Conread position:
               11-323
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 46
               

               Conread position:
               11-324
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               138, 72
               

               Conread position:
               12-335
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               146, 65
               

               Conread position:
               17-170
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               18-328
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               27, 69
               

               Conread position:
               24-156
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               44-328
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               47-325
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               115, 198
               

               Conread position:
               47-326
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               48-310
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               107, 138
               

               Conread position:
               48-324
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               52-330
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               21, 199
               

               Conread position:
               53-328
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               54-299
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               110, 16
               

               Conread position:
               56-240
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               64-321
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               72-328
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               90, 5
               

               Conread position:
               85-336
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               118, 81
               

               Conread position:
               98-321
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 158
               

               Conread position:
               111-328
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 140
               

               Conread position:
               130-328
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               166-328
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               175-322
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 69
               

               Conread position:
               179-325
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               119, 65
               

               Conread position:
               179-325
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 60
               

               Conread position:
               182-328
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               80, 23
               
Show alignments to all cow chromosomes.