Cow genome map


           Conread name:
           rcsk07_o8.y1
        

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 72
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               5, 106
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               5, 80
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               5, 80
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               156, 78
               

               Conread position:
               2-322
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               2-324
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               172, 70
               

               Conread position:
               2-333
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 84
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               170, 76
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               158, 74
               

               Conread position:
               4-324
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               173, 73
               

               Conread position:
               4-324
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               165, 79
               

               Conread position:
               4-324
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 72
               

               Conread position:
               5-157
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 85
               

               Conread position:
               5-166
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               5-172
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               153, 57
               

               Conread position:
               5-173
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               5-192
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               145, 72
               

               Conread position:
               5-200
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               84, 72
               

               Conread position:
               5-211
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 76
               

               Conread position:
               5-225
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               159, 79
               

               Conread position:
               5-234
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               5-235
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               40, 84
               

               Conread position:
               5-240
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               162, 75
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 75
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 72
               

               Conread position:
               5-272
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               157, 72
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               150, 274
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               153, 73
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 78
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               295, 70
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               41, 76
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               179, 75
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               159, 75
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 71
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               159, 72
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               40, 81
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 72
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               112, 72
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               157, 72
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               157, 72
               

               Conread position:
               5-330
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 169
               

               Conread position:
               5-331
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               155, 261
               

               Conread position:
               5-331
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 253
               

               Conread position:
               5-335
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               150, 72
               

               Conread position:
               5-335
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               198, 56
               

               Conread position:
               6-173
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-178
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               151, 71
               

               Conread position:
               6-234
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               6-237
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 77
               

               Conread position:
               6-320
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               152, 118
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 77
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               156, 74
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               69, 255
               

               Conread position:
               7-269
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               150, 70
               

               Conread position:
               7-325
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               155, 32
               

               Conread position:
               7-328
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               27, 77
               

               Conread position:
               8-173
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               8-232
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               150, 69
               

               Conread position:
               8-286
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               150, 251
               

               Conread position:
               8-323
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               8-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               8-325
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               166, 69
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               37, 75
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               233, 69
               

               Conread position:
               11-317
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 66
               

               Conread position:
               11-323
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               11-331
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               15-330
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               149, 51
               

               Conread position:
               18-242
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               141, 62
               

               Conread position:
               20-289
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               154, 63
               

               Conread position:
               39-243
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               164, 41
               

               Conread position:
               43-330
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               44-323
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               118, 86
               

               Conread position:
               44-328
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 33
               

               Conread position:
               83-328
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               78, 173
               

               Conread position:
               83-329
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               84, 31
               

               Conread position:
               98-322
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 155
               

               Conread position:
               113-328
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               169-328
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               170-330
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 83
               
Show alignments to all cow chromosomes.