Cow genome map


           Conread name:
           rcsk07_o8.y1
        

               Conread position:
               1-138
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               1-173
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               5, 80
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               5, 86
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               5, 46
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               1-321
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 78
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               5, 56
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               5, 198
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 80
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               5, 90
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               5, 55
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               5, 89
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               5, 81
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               5, 89
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               2-323
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 80
               

               Conread position:
               3-325
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               4-157
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               4-321
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               50, 82
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               158, 76
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 77
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               155, 76
               

               Conread position:
               5-157
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               5-185
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               5-196
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               97, 72
               

               Conread position:
               5-233
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               164, 71
               

               Conread position:
               5-243
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               5-250
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               135, 72
               

               Conread position:
               5-319
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               153, 78
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               45, 77
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               142, 38
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               167, 72
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 72
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               239, 49
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 28
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               156, 78
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               150, 70
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               139, 19
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               153, 75
               

               Conread position:
               5-328
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               153, 72
               

               Conread position:
               5-331
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 75
               

               Conread position:
               5-332
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               153, 75
               

               Conread position:
               5-397
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               157, 57
               

               Conread position:
               6-157
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               6-173
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               6-189
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               6-211
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-237
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               39, 81
               

               Conread position:
               6-242
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-256
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               161, 72
               

               Conread position:
               6-318
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               151, 248
               

               Conread position:
               6-320
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               109, 49
               

               Conread position:
               6-321
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-321
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               156, 74
               

               Conread position:
               6-321
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               134, 42
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-323
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               153, 74
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-326
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               6-328
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               7-139
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 75
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               84, 60
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 70
               

               Conread position:
               7-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               8-193
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               150, 67
               

               Conread position:
               8-325
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 81
               

               Conread position:
               11-206
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               147, 60
               

               Conread position:
               11-242
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               164, 66
               

               Conread position:
               11-322
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               151, 76
               

               Conread position:
               11-322
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               11-323
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               151, 66
               

               Conread position:
               11-324
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 24
               

               Conread position:
               12-328
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               148, 68
               

               Conread position:
               12-331
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               37, 211
               

               Conread position:
               44-237
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               47-323
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 33
               

               Conread position:
               47-324
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               48-295
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 133
               

               Conread position:
               48-328
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               48-328
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               126, 32
               

               Conread position:
               49-324
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               113, 34
               

               Conread position:
               62-323
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               62-324
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               62-331
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               67-260
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               93-325
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 168
               

               Conread position:
               94-324
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               109, 73
               

               Conread position:
               102-328
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               120-323
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 145
               

               Conread position:
               129-322
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               166-328
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               179-328
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               112, 65
               
Show alignments to all cow chromosomes.