Cow genome map

Conread name: rcsk07_o8.y1

Conread position: 1-242
Cow position: chr23:20980412-20980658 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 5, 55

Conread position: 1-317
Cow position: chr23:9712679-9712998 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 5, 77

Conread position: 1-319
Cow position: chr23:11128799-11129117 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 5, 80

Conread position: 1-323
Cow position: chr23:10852621-10852938 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 80

Conread position: 1-323
Cow position: chr23:13520024-13520339 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 5, 77

Conread position: 1-323
Cow position: chr23:21789205-21788878 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 15

Conread position: 1-323
Cow position: chr23:24504809-24505138 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 83

Conread position: 1-326
Cow position: chr23:4067685-4068006 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 89

Conread position: 1-331
Cow position: chr23:18797137-18796788 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 77

Conread position: 1-331
Cow position: chr23:36688267-36687928 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 209

Conread position: 4-328
Cow position: chr23:29271669-29272016 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 11

Conread position: 5-146
Cow position: chr23:1428373-1428511 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 5-153
Cow position: chr23:16237793-16237638 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 80

Conread position: 5-153
Cow position: chr23:36308988-36309128 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 51

Conread position: 5-157
Cow position: chr23:26941551-26941704 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 75

Conread position: 5-161
Cow position: chr23:15608329-15608176 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 32

Conread position: 5-175
Cow position: chr23:11814076-11813901 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 78

Conread position: 5-201
Cow position: chr23:39028365-39028572 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 5-242
Cow position: chr23:20704175-20703927 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 84

Conread position: 5-320
Cow position: chr23:26986710-26986385 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 51

Conread position: 5-321
Cow position: chr23:7844861-7845180 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 135, 16

Conread position: 5-321
Cow position: chr23:8911050-8911361 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 66

Conread position: 5-322
Cow position: chr23:1535893-1536212 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 153, 72

Conread position: 5-323
Cow position: chr23:30663053-30662736 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 72

Conread position: 5-323
Cow position: chr23:36129328-36129014 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 72

Conread position: 5-324
Cow position: chr23:1640382-1640706 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 153, 72

Conread position: 5-324
Cow position: chr23:4579467-4579145 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 57, 73

Conread position: 5-324
Cow position: chr23:16170264-16170584 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 61

Conread position: 5-325
Cow position: chr23:30656591-30656283 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 77

Conread position: 5-327
Cow position: chr23:29447471-29447150 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 75

Conread position: 5-328
Cow position: chr23:1398463-1398144 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 166, 78

Conread position: 5-330
Cow position: chr23:7596758-7596437 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 224

Conread position: 5-330
Cow position: chr23:27564123-27563813 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 147, 75

Conread position: 5-333
Cow position: chr23:3727827-3727498 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 159, 49

Conread position: 6-127
Cow position: chr23:9599102-9599222 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 6-171
Cow position: chr23:6245362-6245195 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 152, 72

Conread position: 6-173
Cow position: chr23:19535200-19535031 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 50

Conread position: 6-237
Cow position: chr23:26824564-26824798 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 32

Conread position: 6-237
Cow position: chr23:35937595-35937826 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 126, 75

Conread position: 6-242
Cow position: chr23:20001650-20001888 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 152, 38

Conread position: 6-322
Cow position: chr23:10873878-10873557 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 156, 273

Conread position: 6-322
Cow position: chr23:26932518-26932198 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 156, 71

Conread position: 6-324
Cow position: chr23:41285511-41285815 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 129, 71

Conread position: 6-326
Cow position: chr23:1924266-1923944 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 40, 15

Conread position: 6-337
Cow position: chr23:416737-417062 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 76

Conread position: 7-324
Cow position: chr23:11473932-11473614 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 49

Conread position: 7-325
Cow position: chr23:13511309-13511627 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 73

Conread position: 7-325
Cow position: chr23:20745016-20744700 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 70

Conread position: 8-165
Cow position: chr23:21659528-21659691 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 79

Conread position: 8-322
Cow position: chr23:1604801-1605115 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 149, 69

Conread position: 8-324
Cow position: chr23:14191125-14191443 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 69, 74

Conread position: 8-325
Cow position: chr23:26318993-26319314 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 149, 75

Conread position: 10-326
Cow position: chr23:3209040-3208727 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 156, 67

Conread position: 11-129
Cow position: chr23:20605721-20605604 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 11-269
Cow position: chr23:39813030-39813291 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 66

Conread position: 11-319
Cow position: chr23:18698450-18698143 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 66

Conread position: 11-328
Cow position: chr23:14642625-14642301 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 77

Conread position: 13-151
Cow position: chr23:644890-645031 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 55

Conread position: 13-324
Cow position: chr23:361338-361025 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 73

Conread position: 14-153
Cow position: chr23:8063107-8063245 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 22

Conread position: 15-329
Cow position: chr23:21336909-21336596 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 62

Conread position: 32-328
Cow position: chr23:36146850-36146562 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 15, 54

Conread position: 45-322
Cow position: chr23:19636652-19636372 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 117, 38

Conread position: 48-324
Cow position: chr23:666494-666220 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 69-325
Cow position: chr23:5389339-5389595 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 11

Conread position: 78-329
Cow position: chr23:8930467-8930217 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 5

Conread position: 118-324
Cow position: chr23:1905711-1905920 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 137

Conread position: 118-357
Cow position: chr23:39780295-39780533 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 132

Conread position: 160-324
Cow position: chr23:8918125-8917961 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 95

Conread position: 160-328
Cow position: chr23:35363043-35362879 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 79

Show alignments to all cow chromosomes.