Cow genome map
| Conread name: | rcsk07_o8.y1 |
| Conread position: | 1-153 |
| Cow position: | chr26:22659466-22659315 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 73 |
| Conread position: | 1-178 |
| Cow position: | chr26:20130501-20130316 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-323 |
| Cow position: | chr26:2702428-2702112 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 1-323 |
| Cow position: | chr26:11361851-11361522 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 1-328 |
| Cow position: | chr26:3755820-3756144 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 5, 85 |
| Conread position: | 1-328 |
| Cow position: | chr26:6323243-6323576 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 2-322 |
| Cow position: | chr26:29575973-29576290 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 2-325 |
| Cow position: | chr26:6475850-6475524 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 43, 85 |
| Conread position: | 4-322 |
| Cow position: | chr26:22191076-22191395 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 158, 73 |
| Conread position: | 4-322 |
| Cow position: | chr26:23591809-23592127 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 4-323 |
| Cow position: | chr26:30724790-30724465 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 158, 74 |
| Conread position: | 4-328 |
| Cow position: | chr26:783354-783022 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 5-146 |
| Cow position: | chr26:829153-829293 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 5-234 |
| Cow position: | chr26:2739951-2739717 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 5-237 |
| Cow position: | chr26:12145519-12145285 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 78, 197 |
| Conread position: | 5-240 |
| Cow position: | chr26:30569294-30569055 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 152, 72 |
| Conread position: | 5-242 |
| Cow position: | chr26:31462466-31462701 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 129, 76 |
| Conread position: | 5-278 |
| Cow position: | chr26:8820463-8820198 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 5-284 |
| Cow position: | chr26:24239527-24239814 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 124, 72 |
| Conread position: | 5-318 |
| Cow position: | chr26:8307927-8307612 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 125, 72 |
| Conread position: | 5-322 |
| Cow position: | chr26:14395649-14395332 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 72 |
| Conread position: | 5-323 |
| Cow position: | chr26:20059117-20059424 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 165, 56 |
| Conread position: | 5-323 |
| Cow position: | chr26:28442424-28442106 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 5-324 |
| Cow position: | chr26:13706402-13706099 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 293, 75 |
| Conread position: | 5-328 |
| Cow position: | chr26:8352545-8352871 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-330 |
| Cow position: | chr26:18877591-18877919 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-331 |
| Cow position: | chr26:13774089-13774395 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 6-242 |
| Cow position: | chr26:6097526-6097286 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 152, 77 |
| Conread position: | 6-322 |
| Cow position: | chr26:14486447-14486126 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr26:21397783-21397463 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 6-333 |
| Cow position: | chr26:6466281-6466612 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 7-176 |
| Cow position: | chr26:13801672-13801839 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 151, 70 |
| Conread position: | 9-234 |
| Cow position: | chr26:6030170-6029943 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 158, 71 |
| Conread position: | 11-330 |
| Cow position: | chr26:16796629-16796321 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 38 |
| Conread position: | 11-330 |
| Cow position: | chr26:23272373-23272695 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 15-237 |
| Cow position: | chr26:17181158-17180930 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 15-319 |
| Cow position: | chr26:15857275-15857580 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 69 |
| Conread position: | 40-322 |
| Cow position: | chr26:4444711-4444431 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 124, 37 |
| Conread position: | 49-322 |
| Cow position: | chr26:30039119-30038842 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 49-328 |
| Cow position: | chr26:14510363-14510091 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 56-324 |
| Cow position: | chr26:23926346-23926081 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 59-323 |
| Cow position: | chr26:32553321-32553583 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 74-323 |
| Cow position: | chr26:15938307-15938559 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 88-325 |
| Cow position: | chr26:16603960-16604194 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 67 |
| Conread position: | 92-322 |
| Cow position: | chr26:19636847-19637081 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 159 |
| Conread position: | 107-331 |
| Cow position: | chr26:6497943-6498173 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 167-322 |
| Cow position: | chr26:8277820-8277663 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 78 |
| Conread position: | 185-328 |
| Cow position: | chr26:20129905-20129762 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 60 |
Show alignments to all cow chromosomes.