Cow genome map


           Conread name:
           rcsk07_o8.y1
        

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               5, 86
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               5, 76
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               5, 53
               

               Conread position:
               1-274
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               5, 19
               

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               6, 91
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               5, 84
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               6, 81
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               5, 47
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 84
               

               Conread position:
               2-323
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               289, 75
               

               Conread position:
               2-328
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 82
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               41, 259
               

               Conread position:
               4-195
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               4-236
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               131, 76
               

               Conread position:
               4-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               154, 76
               

               Conread position:
               4-322
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               158, 68
               

               Conread position:
               4-330
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               4-331
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 281
               

               Conread position:
               5-136
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               5-138
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               5-153
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 82
               

               Conread position:
               5-157
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               5-226
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 115
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 72
               

               Conread position:
               5-317
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 70
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               239, 16
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               164, 48
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               153, 72
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               159, 72
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               167, 72
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 41
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               140, 29
               

               Conread position:
               5-325
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               5-326
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               153, 72
               

               Conread position:
               6-242
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               158, 74
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               157, 48
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 73
               

               Conread position:
               11-157
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               11-237
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               147, 66
               

               Conread position:
               11-324
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               14-323
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               16-243
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               146, 61
               

               Conread position:
               28-323
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               134, 9
               

               Conread position:
               36-321
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               126, 20
               

               Conread position:
               36-322
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               38-329
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               44-328
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               120, 27
               

               Conread position:
               44-328
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               114, 33
               

               Conread position:
               44-335
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               48-323
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               114, 7
               

               Conread position:
               49-322
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               113, 31
               

               Conread position:
               49-324
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               154, 35
               

               Conread position:
               49-324
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               128, 31
               

               Conread position:
               55-328
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               95-321
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 170
               

               Conread position:
               118-328
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               121-323
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 137
               

               Conread position:
               140-323
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               160-328
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 115
               

               Conread position:
               166-321
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 80
               

               Conread position:
               175-324
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 74
               

               Conread position:
               182-325
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 62
               
Show alignments to all cow chromosomes.