Cow genome map
Conread name: | rcsk07_o8.y1 |
Conread position: | 1-165 |
Cow position: | chr27:21578174-21578347 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 135 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 5, 86 |
Conread position: | 1-172 |
Cow position: | chr27:27527815-27527989 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 124 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 5, 77 |
Conread position: | 1-233 |
Cow position: | chr27:27737537-27737776 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 175 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 5, 76 |
Conread position: | 1-242 |
Cow position: | chr27:26142186-26141939 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 175 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 5, 53 |
Conread position: | 1-274 |
Cow position: | chr27:23502853-23502575 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 205 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 5, 19 |
Conread position: | 1-313 |
Cow position: | chr27:23511511-23511201 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 77 |
Conread position: | 1-322 |
Cow position: | chr27:20866131-20866456 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 228 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 6, 91 |
Conread position: | 1-323 |
Cow position: | chr27:30447579-30447241 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 237 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 5, 84 |
Conread position: | 1-324 |
Cow position: | chr27:23472645-23472320 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 235 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 6, 81 |
Conread position: | 1-328 |
Cow position: | chr27:15319841-15319511 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 230 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 5, 47 |
Conread position: | 1-339 |
Cow position: | chr27:23452872-23452532 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 231 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 5, 84 |
Conread position: | 2-323 |
Cow position: | chr27:732953-732641 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 220 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 289, 75 |
Conread position: | 2-328 |
Cow position: | chr27:26300231-26299901 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 234 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 52, 82 |
Conread position: | 3-324 |
Cow position: | chr27:491291-490956 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 236 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 41, 259 |
Conread position: | 4-195 |
Cow position: | chr27:8262621-8262816 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 138 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 42, 52 |
Conread position: | 4-236 |
Cow position: | chr27:15925723-15925486 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 175 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 131, 76 |
Conread position: | 4-243 |
Cow position: | chr27:1294030-1294275 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 174 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 154, 76 |
Conread position: | 4-322 |
Cow position: | chr27:26545536-26545852 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 222 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 158, 68 |
Conread position: | 4-330 |
Cow position: | chr27:12277889-12278205 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 236 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 47, 60 |
Conread position: | 4-331 |
Cow position: | chr27:26223873-26224212 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 238 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 68, 281 |
Conread position: | 5-136 |
Cow position: | chr27:15364054-15364185 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 100 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 44, 73 |
Conread position: | 5-138 |
Cow position: | chr27:10275075-10275207 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 101 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 5-153 |
Cow position: | chr27:2848308-2848155 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 39, 82 |
Conread position: | 5-157 |
Cow position: | chr27:22559464-22559314 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 5-226 |
Cow position: | chr27:1123409-1123183 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 160 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 57, 115 |
Conread position: | 5-242 |
Cow position: | chr27:22107868-22108114 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 172 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 50, 72 |
Conread position: | 5-317 |
Cow position: | chr27:22440529-22440212 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 70 |
Conread position: | 5-320 |
Cow position: | chr27:13198291-13197985 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 225 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 239, 16 |
Conread position: | 5-323 |
Cow position: | chr27:8291626-8291933 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 226 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 164, 48 |
Conread position: | 5-323 |
Cow position: | chr27:8942305-8942611 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 216 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 25, 32 |
Conread position: | 5-323 |
Cow position: | chr27:24999349-24999669 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 227 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 153, 72 |
Conread position: | 5-323 |
Cow position: | chr27:29309408-29309094 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 208 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 43 |
Conread position: | 5-324 |
Cow position: | chr27:815752-815434 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 227 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 159, 72 |
Conread position: | 5-324 |
Cow position: | chr27:4673402-4673087 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 222 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 167, 72 |
Conread position: | 5-324 |
Cow position: | chr27:16620373-16620056 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 41 |
Conread position: | 5-324 |
Cow position: | chr27:25380382-25380061 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 232 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 140, 29 |
Conread position: | 5-325 |
Cow position: | chr27:9090408-9090736 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 237 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 25, 81 |
Conread position: | 5-326 |
Cow position: | chr27:13442451-13442785 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 222 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 153, 72 |
Conread position: | 6-242 |
Cow position: | chr27:1906455-1906214 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 172 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 156, 71 |
Conread position: | 6-322 |
Cow position: | chr27:13422379-13422059 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 217 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 158, 74 |
Conread position: | 7-324 |
Cow position: | chr27:6074300-6073989 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 227 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 157, 48 |
Conread position: | 7-324 |
Cow position: | chr27:14669996-14670316 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 73 |
Conread position: | 11-157 |
Cow position: | chr27:28036532-28036677 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 11-237 |
Cow position: | chr27:26785601-26785829 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 147, 66 |
Conread position: | 11-324 |
Cow position: | chr27:17397073-17397382 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 218 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 59, 67 |
Conread position: | 14-323 |
Cow position: | chr27:7289730-7290038 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 223 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 7, 67 |
Conread position: | 16-243 |
Cow position: | chr27:29341168-29341408 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 173 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 146, 61 |
Conread position: | 28-323 |
Cow position: | chr27:2900169-2899881 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 202 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 134, 9 |
Conread position: | 36-321 |
Cow position: | chr27:25411160-25411446 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 212 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 126, 20 |
Conread position: | 36-322 |
Cow position: | chr27:20634805-20634524 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 196 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 126, 35 |
Conread position: | 38-329 |
Cow position: | chr27:24227439-24227730 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 219 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 126, 42 |
Conread position: | 44-328 |
Cow position: | chr27:4664818-4664536 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 217 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 120, 27 |
Conread position: | 44-328 |
Cow position: | chr27:31371945-31372227 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 207 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 114, 33 |
Conread position: | 44-335 |
Cow position: | chr27:26091056-26091337 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 204 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 28, 32 |
Conread position: | 48-323 |
Cow position: | chr27:26427785-26428063 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 202 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 114, 7 |
Conread position: | 49-322 |
Cow position: | chr27:18922793-18922521 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 204 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 113, 31 |
Conread position: | 49-324 |
Cow position: | chr27:12246988-12246725 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 191 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 154, 35 |
Conread position: | 49-324 |
Cow position: | chr27:30856059-30856322 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 194 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 128, 31 |
Conread position: | 55-328 |
Cow position: | chr27:23070026-23070298 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 194 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 125, 25 |
Conread position: | 95-321 |
Cow position: | chr27:29977553-29977317 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 162 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 72, 170 |
Conread position: | 118-328 |
Cow position: | chr27:16580893-16580686 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 154 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 49, 13 |
Conread position: | 121-323 |
Cow position: | chr27:12429684-12429472 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 150 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 36, 137 |
Conread position: | 140-323 |
Cow position: | chr27:12516450-12516264 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 18, 108 |
Conread position: | 160-328 |
Cow position: | chr27:26440828-26440996 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 115 |
Conread position: | 166-321 |
Cow position: | chr27:29019524-29019681 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 31, 80 |
Conread position: | 175-324 |
Cow position: | chr27:4812664-4812812 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 114 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 69, 74 |
Conread position: | 182-325 |
Cow position: | chr27:13847845-13847706 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 21, 62 |
Show alignments to all cow chromosomes.