Cow genome map

Conread name: rcsk07_o8.y1

Conread position: 1-157
Cow position: chr29:25088298-25088454 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 52, 77

Conread position: 1-165
Cow position: chr29:7664204-7664037 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 83

Conread position: 1-269
Cow position: chr29:44607610-44607340 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 123

Conread position: 1-278
Cow position: chr29:4058067-4058364 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 92

Conread position: 1-288
Cow position: chr29:4084630-4084923 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 88

Conread position: 1-322
Cow position: chr29:4524423-4524736 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 80

Conread position: 1-325
Cow position: chr29:32644472-32644811 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 86

Conread position: 1-327
Cow position: chr29:28621709-28621386 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 5, 216

Conread position: 1-335
Cow position: chr29:6150504-6150185 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 83

Conread position: 2-324
Cow position: chr29:17109537-17109855 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 147, 81

Conread position: 3-192
Cow position: chr29:42709209-42709019 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 159, 74

Conread position: 4-324
Cow position: chr29:649830-650165 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 78

Conread position: 4-325
Cow position: chr29:24952248-24952576 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 79

Conread position: 5-125
Cow position: chr29:16195397-16195515 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 5-136
Cow position: chr29:31594501-31594371 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 5-146
Cow position: chr29:40300399-40300259 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 5-157
Cow position: chr29:3539688-3539535 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 80

Conread position: 5-157
Cow position: chr29:5109712-5109561 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 5-171
Cow position: chr29:34298180-34298015 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 5-228
Cow position: chr29:21592271-21592500 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 72

Conread position: 5-242
Cow position: chr29:10674583-10674822 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 153, 50

Conread position: 5-288
Cow position: chr29:6771548-6771844 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 78

Conread position: 5-292
Cow position: chr29:9332712-9333002 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 124, 75

Conread position: 5-296
Cow position: chr29:14116612-14116903 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 72

Conread position: 5-317
Cow position: chr29:44233375-44233070 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 159, 72

Conread position: 5-322
Cow position: chr29:12309567-12309877 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 218
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 153, 75

Conread position: 5-323
Cow position: chr29:3822427-3822730 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 67

Conread position: 5-323
Cow position: chr29:16501453-16501770 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 33

Conread position: 5-323
Cow position: chr29:23988361-23988698 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 84

Conread position: 5-324
Cow position: chr29:17524-17217 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 198, 61

Conread position: 5-324
Cow position: chr29:19756015-19756334 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 41, 73

Conread position: 5-324
Cow position: chr29:34746086-34745774 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 135, 75

Conread position: 6-153
Cow position: chr29:2623945-2623799 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 6-157
Cow position: chr29:29770917-29770766 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 134, 71

Conread position: 6-189
Cow position: chr29:41113276-41113090 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 76

Conread position: 6-192
Cow position: chr29:6333116-6333304 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 152, 71

Conread position: 6-211
Cow position: chr29:16152379-16152587 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 24, 50

Conread position: 6-322
Cow position: chr29:11321779-11321465 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 168, 146

Conread position: 6-322
Cow position: chr29:15251651-15251971 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 210
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 156, 71

Conread position: 6-322
Cow position: chr29:23449032-23448704 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 156, 71

Conread position: 6-322
Cow position: chr29:29065996-29066311 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 156, 70

Conread position: 6-322
Cow position: chr29:32555945-32555628 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 50

Conread position: 6-324
Cow position: chr29:6775416-6775103 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 152, 77

Conread position: 6-324
Cow position: chr29:8190910-8190575 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 36, 43

Conread position: 6-324
Cow position: chr29:45006047-45005738 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 158, 71

Conread position: 6-329
Cow position: chr29:28775885-28775571 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 29, 80

Conread position: 7-319
Cow position: chr29:686621-686310 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 70

Conread position: 7-321
Cow position: chr29:42821356-42821671 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 170, 70

Conread position: 7-323
Cow position: chr29:38910434-38910114 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 151, 70

Conread position: 7-324
Cow position: chr29:41812004-41811695 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 159, 70

Conread position: 7-325
Cow position: chr29:19761845-19762164 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 70

Conread position: 7-325
Cow position: chr29:35291668-35291978 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 70

Conread position: 8-185
Cow position: chr29:6334357-6334536 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 150, 69

Conread position: 8-321
Cow position: chr29:4480603-4480288 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 150, 75

Conread position: 8-322
Cow position: chr29:28990516-28990828 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 48

Conread position: 8-330
Cow position: chr29:13553712-13554027 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 75

Conread position: 11-320
Cow position: chr29:732200-732502 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 155, 66

Conread position: 11-322
Cow position: chr29:35406211-35405909 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 161, 66

Conread position: 11-323
Cow position: chr29:35281077-35281382 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 147, 66

Conread position: 11-326
Cow position: chr29:39567262-39567576 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 151, 35

Conread position: 13-323
Cow position: chr29:10225455-10225145 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 59

Conread position: 21-324
Cow position: chr29:35459174-35458888 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 175, 45

Conread position: 39-324
Cow position: chr29:35502044-35501764 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 28, 42

Conread position: 44-321
Cow position: chr29:13040946-13040668 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 113, 36

Conread position: 44-325
Cow position: chr29:5948180-5947904 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 113, 36

Conread position: 44-328
Cow position: chr29:17543061-17543342 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 113, 36

Conread position: 44-330
Cow position: chr29:12450992-12451267 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 254, 32

Conread position: 44-330
Cow position: chr29:26263462-26263741 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 118, 36

Conread position: 44-330
Cow position: chr29:34700193-34699925 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 159, 24

Conread position: 47-322
Cow position: chr29:11365867-11366125 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 49-325
Cow position: chr29:603682-603427 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 249, 31

Conread position: 77-320
Cow position: chr29:23874096-23874339 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 87, 73

Conread position: 83-319
Cow position: chr29:5892495-5892730 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 92, 164

Conread position: 85-335
Cow position: chr29:6293817-6293578 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 161

Conread position: 94-324
Cow position: chr29:9709355-9709583 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 160

Conread position: 170-330
Cow position: chr29:40891965-40891805 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 86

Show alignments to all cow chromosomes.