Cow genome map


           Conread name:
           rcsk07_o8.y1
        

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               1-165
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 123
               

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 92
               

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               5, 80
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 86
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               5, 216
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               5, 83
               

               Conread position:
               2-324
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               147, 81
               

               Conread position:
               3-192
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               159, 74
               

               Conread position:
               4-324
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               4-325
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 79
               

               Conread position:
               5-125
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               5-136
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               5-146
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               5-157
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 80
               

               Conread position:
               5-157
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               5-171
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               5-228
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               120, 72
               

               Conread position:
               5-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               153, 50
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               5-292
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               5-296
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               142, 72
               

               Conread position:
               5-317
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               159, 72
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               153, 75
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               198, 61
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               41, 73
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               135, 75
               

               Conread position:
               6-153
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               6-157
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               134, 71
               

               Conread position:
               6-189
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               71, 76
               

               Conread position:
               6-192
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               6-211
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               168, 146
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               156, 70
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               152, 77
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               6-324
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               158, 71
               

               Conread position:
               6-329
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               7-319
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               151, 70
               

               Conread position:
               7-321
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               170, 70
               

               Conread position:
               7-323
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               151, 70
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               159, 70
               

               Conread position:
               7-325
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 70
               

               Conread position:
               7-325
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               122, 70
               

               Conread position:
               8-185
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               150, 69
               

               Conread position:
               8-321
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               150, 75
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               38, 48
               

               Conread position:
               8-330
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 75
               

               Conread position:
               11-320
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               155, 66
               

               Conread position:
               11-322
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               161, 66
               

               Conread position:
               11-323
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               147, 66
               

               Conread position:
               11-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               151, 35
               

               Conread position:
               13-323
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               40, 59
               

               Conread position:
               21-324
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               175, 45
               

               Conread position:
               39-324
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               44-321
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               113, 36
               

               Conread position:
               44-325
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               113, 36
               

               Conread position:
               44-328
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               113, 36
               

               Conread position:
               44-330
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               254, 32
               

               Conread position:
               44-330
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               118, 36
               

               Conread position:
               44-330
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               159, 24
               

               Conread position:
               47-322
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               49-325
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               249, 31
               

               Conread position:
               77-320
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               87, 73
               

               Conread position:
               83-319
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               92, 164
               

               Conread position:
               85-335
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               86, 161
               

               Conread position:
               94-324
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               65, 160
               

               Conread position:
               170-330
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 86
               
Show alignments to all cow chromosomes.