Cow genome map

Conread name: rcsk07_o8.y1

Conread position: 1-137
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 76

Conread position: 1-144
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 83

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 77

Conread position: 1-157
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 1-227
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 81

Conread position: 1-322
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 80

Conread position: 1-322
Cow position:
Alignm length: 328
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 44

Conread position: 1-322
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 5, 38

Conread position: 1-323
Cow position:
Alignm length: 333
Alignm identity: 228
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 5, 83

Conread position: 1-323
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 5, 87

Conread position: 1-324
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 78

Conread position: 1-324
Cow position:
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 77

Conread position: 1-325
Cow position:
Alignm length: 348
Alignm identity: 241
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 83

Conread position: 1-328
Cow position:
Alignm length: 343
Alignm identity: 243
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 5, 85

Conread position: 1-328
Cow position:
Alignm length: 342
Alignm identity: 243
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 5, 88

Conread position: 1-331
Cow position:
Alignm length: 343
Alignm identity: 232
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 157, 76

Conread position: 1-333
Cow position:
Alignm length: 345
Alignm identity: 245
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 5, 86

Conread position: 1-336
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 77

Conread position: 4-296
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 158, 74

Conread position: 4-316
Cow position:
Alignm length: 329
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 160, 77

Conread position: 4-323
Cow position:
Alignm length: 328
Alignm identity: 218
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 153, 76

Conread position: 4-323
Cow position:
Alignm length: 327
Alignm identity: 216
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 158, 76

Conread position: 5-139
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 5-157
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 5-171
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 153, 72

Conread position: 5-173
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 16

Conread position: 5-173
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 51

Conread position: 5-173
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 153, 72

Conread position: 5-186
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 150, 70

Conread position: 5-209
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 172, 75

Conread position: 5-209
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 168, 76

Conread position: 5-235
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 0

Conread position: 5-242
Cow position:
Alignm length: 245
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 139, 78

Conread position: 5-242
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 152, 72

Conread position: 5-254
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 153, 72

Conread position: 5-256
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 153, 75

Conread position: 5-315
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 162, 56

Conread position: 5-320
Cow position:
Alignm length: 330
Alignm identity: 235
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 40, 81

Conread position: 5-321
Cow position:
Alignm length: 331
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 150, 72

Conread position: 5-321
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 151, 71

Conread position: 5-322
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 41, 51

Conread position: 5-322
Cow position:
Alignm length: 322
Alignm identity: 225
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 153, 75

Conread position: 5-322
Cow position:
Alignm length: 331
Alignm identity: 225
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 84

Conread position: 5-322
Cow position:
Alignm length: 332
Alignm identity: 223
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 78

Conread position: 5-323
Cow position:
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 72

Conread position: 5-323
Cow position:
Alignm length: 330
Alignm identity: 228
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 19

Conread position: 5-323
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 75

Conread position: 5-323
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 75

Conread position: 5-323
Cow position:
Alignm length: 322
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 146, 66

Conread position: 5-324
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 153, 75

Conread position: 5-324
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 68, 48

Conread position: 5-325
Cow position:
Alignm length: 330
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 153, 72

Conread position: 5-325
Cow position:
Alignm length: 326
Alignm identity: 238
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 38, 30

Conread position: 5-328
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 39, 79

Conread position: 5-328
Cow position:
Alignm length: 344
Alignm identity: 232
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 82

Conread position: 5-328
Cow position:
Alignm length: 333
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 156, 60

Conread position: 5-328
Cow position:
Alignm length: 331
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 79

Conread position: 5-328
Cow position:
Alignm length: 332
Alignm identity: 226
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 161, 79

Conread position: 5-330
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 152, 72

Conread position: 5-330
Cow position:
Alignm length: 345
Alignm identity: 239
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 78

Conread position: 5-330
Cow position:
Alignm length: 346
Alignm identity: 248
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 41, 81

Conread position: 5-330
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 191, 72

Conread position: 5-331
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 75

Conread position: 5-331
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 47, 82

Conread position: 5-331
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 153, 75

Conread position: 5-337
Cow position:
Alignm length: 346
Alignm identity: 238
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 81

Conread position: 5-339
Cow position:
Alignm length: 342
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 150, 75

Conread position: 5-364
Cow position:
Alignm length: 376
Alignm identity: 255
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 39, 78

Conread position: 6-146
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 66

Conread position: 6-151
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 6-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 83

Conread position: 6-206
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 171, 71

Conread position: 6-211
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 50

Conread position: 6-236
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 152, 56

Conread position: 6-237
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 80

Conread position: 6-242
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 156, 71

Conread position: 6-242
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 78

Conread position: 6-242
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 158, 74

Conread position: 6-313
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 158, 71

Conread position: 6-317
Cow position:
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 70

Conread position: 6-317
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 95, 69

Conread position: 6-318
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 31

Conread position: 6-322
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 50

Conread position: 6-322
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 50

Conread position: 6-322
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 92

Conread position: 6-323
Cow position:
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 71

Conread position: 6-323
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 71

Conread position: 6-324
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 152, 71

Conread position: 6-324
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 153, 71

Conread position: 6-325
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 152, 71

Conread position: 6-325
Cow position:
Alignm length: 328
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 155, 69

Conread position: 6-330
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 99, 77

Conread position: 7-157
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 7-206
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 74

Conread position: 7-220
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 151, 70

Conread position: 7-317
Cow position:
Alignm length: 320
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 170, 70

Conread position: 7-322
Cow position:
Alignm length: 324
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 162, 74

Conread position: 7-323
Cow position:
Alignm length: 325
Alignm identity: 207
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 49

Conread position: 7-324
Cow position:
Alignm length: 324
Alignm identity: 232
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 151, 76

Conread position: 7-325
Cow position:
Alignm length: 330
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 71

Conread position: 7-329
Cow position:
Alignm length: 334
Alignm identity: 239
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 155, 48

Conread position: 7-330
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 168, 76

Conread position: 7-331
Cow position:
Alignm length: 332
Alignm identity: 231
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 155, 30

Conread position: 7-336
Cow position:
Alignm length: 342
Alignm identity: 231
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 128, 17

Conread position: 8-324
Cow position:
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 75

Conread position: 8-324
Cow position:
Alignm length: 324
Alignm identity: 230
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 150, 69

Conread position: 11-189
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 147, 69

Conread position: 11-325
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 148, 69

Conread position: 12-246
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 145, 50

Conread position: 12-324
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 191, 65

Conread position: 13-326
Cow position:
Alignm length: 328
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 129, 70

Conread position: 16-243
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 69

Conread position: 17-237
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 60

Conread position: 21-146
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 21-322
Cow position:
Alignm length: 306
Alignm identity: 218
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 175, 56

Conread position: 22-325
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 56

Conread position: 24-322
Cow position:
Alignm length: 307
Alignm identity: 214
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 138, 56

Conread position: 34-324
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 144, 49

Conread position: 44-317
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 118, 36

Conread position: 44-324
Cow position:
Alignm length: 288
Alignm identity: 209
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 69, 36

Conread position: 44-325
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 143

Conread position: 44-328
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 28

Conread position: 44-328
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 124, 43

Conread position: 45-325
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 132, 35

Conread position: 47-317
Cow position:
Alignm length: 278
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 36

Conread position: 48-319
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 7

Conread position: 48-321
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 109, 32

Conread position: 49-322
Cow position:
Alignm length: 281
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 34

Conread position: 49-323
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 110, 6

Conread position: 62-330
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 18

Conread position: 63-323
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 113, 17

Conread position: 67-320
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 184

Conread position: 77-328
Cow position:
Alignm length: 262
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 128

Conread position: 79-324
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 90, 179

Conread position: 80-322
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 19

Conread position: 85-325
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 79, 46

Conread position: 85-328
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 162

Conread position: 97-328
Cow position:
Alignm length: 234
Alignm identity: 157
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 87

Conread position: 103-321
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 146

Conread position: 118-328
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 129

Show alignments to all cow chromosomes.