Cow genome map
| Conread name: | rcsk07_o8.y1 |
| Conread position: | 1-242 |
| Cow position: | chr5:23006527-23006269 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 84 |
| Conread position: | 1-289 |
| Cow position: | chr5:59873933-59873651 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 163, 76 |
| Conread position: | 1-317 |
| Cow position: | chr5:58004835-58005154 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 1-322 |
| Cow position: | chr5:28330733-28330424 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 171, 41 |
| Conread position: | 1-323 |
| Cow position: | chr5:46708772-46709097 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 157, 76 |
| Conread position: | 1-325 |
| Cow position: | chr5:44752729-44752396 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-328 |
| Cow position: | chr5:4630707-4631041 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 1-328 |
| Cow position: | chr5:23641406-23641075 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 5, 90 |
| Conread position: | 1-328 |
| Cow position: | chr5:41334197-41334520 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 1-330 |
| Cow position: | chr5:27690476-27690136 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 1-331 |
| Cow position: | chr5:25730021-25729683 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-331 |
| Cow position: | chr5:63647877-63647553 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 5, 62 |
| Conread position: | 2-290 |
| Cow position: | chr5:64122459-64122162 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 2-321 |
| Cow position: | chr5:57365481-57365164 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 2-323 |
| Cow position: | chr5:18276078-18276391 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 4-240 |
| Cow position: | chr5:69520223-69520450 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 4-296 |
| Cow position: | chr5:54337517-54337811 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 4-309 |
| Cow position: | chr5:54126677-54126982 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 154, 73 |
| Conread position: | 4-322 |
| Cow position: | chr5:17027687-17028009 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 4-322 |
| Cow position: | chr5:18557799-18557487 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 158, 76 |
| Conread position: | 4-323 |
| Cow position: | chr5:55631683-55632006 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 158, 77 |
| Conread position: | 4-328 |
| Cow position: | chr5:48224981-48224657 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 4-331 |
| Cow position: | chr5:37942196-37941868 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 156, 73 |
| Conread position: | 5-146 |
| Cow position: | chr5:60752497-60752353 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 5-157 |
| Cow position: | chr5:56433188-56433333 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 5-157 |
| Cow position: | chr5:57584612-57584769 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 5-173 |
| Cow position: | chr5:6032590-6032760 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 152, 75 |
| Conread position: | 5-173 |
| Cow position: | chr5:10248317-10248481 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 154, 39 |
| Conread position: | 5-192 |
| Cow position: | chr5:5812489-5812304 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 5-203 |
| Cow position: | chr5:40532045-40531840 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 158, 57 |
| Conread position: | 5-207 |
| Cow position: | chr5:5194008-5194217 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 5-242 |
| Cow position: | chr5:40270137-40269892 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 5-269 |
| Cow position: | chr5:24919282-24919011 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-270 |
| Cow position: | chr5:40058173-40058440 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 153, 76 |
| Conread position: | 5-282 |
| Cow position: | chr5:51951945-51952235 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 5-319 |
| Cow position: | chr5:15882887-15882563 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 51, 170 |
| Conread position: | 5-319 |
| Cow position: | chr5:18573765-18574079 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 5-319 |
| Cow position: | chr5:42667795-42667483 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 157, 16 |
| Conread position: | 5-319 |
| Cow position: | chr5:47871450-47871138 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 5-321 |
| Cow position: | chr5:14630313-14629993 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 71, 77 |
| Conread position: | 5-321 |
| Cow position: | chr5:17087428-17087114 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 157, 67 |
| Conread position: | 5-321 |
| Cow position: | chr5:52165584-52165268 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 75 |
| Conread position: | 5-322 |
| Cow position: | chr5:15478704-15479025 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 156, 75 |
| Conread position: | 5-322 |
| Cow position: | chr5:24348716-24349019 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 167, 72 |
| Conread position: | 5-322 |
| Cow position: | chr5:26133479-26133162 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 5-323 |
| Cow position: | chr5:3281272-3280958 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-323 |
| Cow position: | chr5:7740728-7740389 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 5-323 |
| Cow position: | chr5:21040379-21040063 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 86, 72 |
| Conread position: | 5-323 |
| Cow position: | chr5:31480748-31481059 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 159, 75 |
| Conread position: | 5-323 |
| Cow position: | chr5:34463989-34463672 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 159, 78 |
| Conread position: | 5-323 |
| Cow position: | chr5:54405300-54404980 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 5-323 |
| Cow position: | chr5:67654900-67655234 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 5-324 |
| Cow position: | chr5:4218478-4218788 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 152, 67 |
| Conread position: | 5-324 |
| Cow position: | chr5:12672430-12672116 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 5-324 |
| Cow position: | chr5:19813625-19813301 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 170, 75 |
| Conread position: | 5-324 |
| Cow position: | chr5:47601406-47601733 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 5-324 |
| Cow position: | chr5:58855699-58856017 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 148, 90 |
| Conread position: | 5-324 |
| Cow position: | chr5:66257243-66257553 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 168, 41 |
| Conread position: | 5-325 |
| Cow position: | chr5:46104352-46104025 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 5-325 |
| Cow position: | chr5:64823709-64823396 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 198, 78 |
| Conread position: | 5-325 |
| Cow position: | chr5:65593468-65593792 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 5-325 |
| Cow position: | chr5:67932875-67932549 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 5-326 |
| Cow position: | chr5:13909011-13908697 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 5-326 |
| Cow position: | chr5:35144938-35145265 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 5-326 |
| Cow position: | chr5:47889120-47888795 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 75 |
| Conread position: | 5-326 |
| Cow position: | chr5:70960553-70960227 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 157, 72 |
| Conread position: | 5-327 |
| Cow position: | chr5:30486846-30487153 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 75 |
| Conread position: | 5-328 |
| Cow position: | chr5:54714147-54713821 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 72, 77 |
| Conread position: | 5-331 |
| Cow position: | chr5:31097207-31096877 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 6-138 |
| Cow position: | chr5:34300487-34300618 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 6-146 |
| Cow position: | chr5:69461000-69461139 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 6-157 |
| Cow position: | chr5:15722699-15722549 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 6-170 |
| Cow position: | chr5:43930171-43930009 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 6-173 |
| Cow position: | chr5:38431660-38431827 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 138, 71 |
| Conread position: | 6-237 |
| Cow position: | chr5:38286690-38286934 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 6-242 |
| Cow position: | chr5:41331957-41332198 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-242 |
| Cow position: | chr5:74644064-74643825 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 6-243 |
| Cow position: | chr5:4348093-4347876 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 6-267 |
| Cow position: | chr5:12315913-12316178 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 71 |
| Conread position: | 6-269 |
| Cow position: | chr5:72046048-72045776 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 122, 38 |
| Conread position: | 6-318 |
| Cow position: | chr5:3066047-3065731 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-321 |
| Cow position: | chr5:12323198-12322890 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 194, 71 |
| Conread position: | 6-321 |
| Cow position: | chr5:14314119-14314436 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 152, 77 |
| Conread position: | 6-321 |
| Cow position: | chr5:20408062-20407756 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 158, 71 |
| Conread position: | 6-322 |
| Cow position: | chr5:351236-350916 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr5:1058946-1058625 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 156, 273 |
| Conread position: | 6-322 |
| Cow position: | chr5:13127907-13127587 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr5:19890686-19891006 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr5:23881710-23881390 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 6-322 |
| Cow position: | chr5:35207857-35208178 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 135, 71 |
| Conread position: | 6-323 |
| Cow position: | chr5:14415368-14415691 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 6-323 |
| Cow position: | chr5:55820977-55821280 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 6-324 |
| Cow position: | chr5:16894173-16893858 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 197, 71 |
| Conread position: | 6-325 |
| Cow position: | chr5:56523770-56524090 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 6-330 |
| Cow position: | chr5:6044882-6045211 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 152, 71 |
| Conread position: | 7-153 |
| Cow position: | chr5:6286746-6286601 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-322 |
| Cow position: | chr5:41980999-41981308 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 155, 68 |
| Conread position: | 7-323 |
| Cow position: | chr5:28795973-28795671 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 196, 73 |
| Conread position: | 7-324 |
| Cow position: | chr5:30302495-30302807 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 151, 76 |
| Conread position: | 7-324 |
| Cow position: | chr5:34638490-34638798 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 70 |
| Conread position: | 7-324 |
| Cow position: | chr5:44848417-44848112 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 7-324 |
| Cow position: | chr5:57074719-57074420 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 196, 70 |
| Conread position: | 7-329 |
| Cow position: | chr5:10261646-10261315 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 8-324 |
| Cow position: | chr5:25231410-25231090 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 158, 116 |
| Conread position: | 8-331 |
| Cow position: | chr5:38831392-38831073 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 77 |
| Conread position: | 9-321 |
| Cow position: | chr5:74015539-74015851 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 150, 71 |
| Conread position: | 9-322 |
| Cow position: | chr5:39094152-39094464 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 9-323 |
| Cow position: | chr5:14904457-14904163 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 11-157 |
| Cow position: | chr5:28456912-28456767 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 11-157 |
| Cow position: | chr5:28460214-28460069 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 11-157 |
| Cow position: | chr5:34669469-34669324 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 11-173 |
| Cow position: | chr5:9024680-9024518 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-188 |
| Cow position: | chr5:15425846-15426024 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 95, 66 |
| Conread position: | 11-231 |
| Cow position: | chr5:17645286-17645067 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 148, 50 |
| Conread position: | 11-292 |
| Cow position: | chr5:55233167-55232894 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 219, 69 |
| Conread position: | 11-322 |
| Cow position: | chr5:9165030-9164715 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 151, 66 |
| Conread position: | 11-328 |
| Cow position: | chr5:41951480-41951167 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 69 |
| Conread position: | 12-325 |
| Cow position: | chr5:41608909-41609214 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 75 |
| Conread position: | 13-229 |
| Cow position: | chr5:70270564-70270786 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 140, 64 |
| Conread position: | 14-323 |
| Cow position: | chr5:50573361-50573670 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 63 |
| Conread position: | 15-322 |
| Cow position: | chr5:23140972-23140666 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 147, 65 |
| Conread position: | 15-325 |
| Cow position: | chr5:10109484-10109813 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 74 |
| Conread position: | 21-324 |
| Cow position: | chr5:44583503-44583214 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 137, 89 |
| Conread position: | 27-330 |
| Cow position: | chr5:72564376-72564680 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 30-328 |
| Cow position: | chr5:14539029-14538741 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 132, 50 |
| Conread position: | 43-325 |
| Cow position: | chr5:26462289-26462568 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 44-291 |
| Cow position: | chr5:70402719-70402959 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 44-323 |
| Cow position: | chr5:14832970-14832698 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 120, 36 |
| Conread position: | 44-323 |
| Cow position: | chr5:46334671-46334941 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 120, 40 |
| Conread position: | 47-324 |
| Cow position: | chr5:66338723-66338993 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 47-330 |
| Cow position: | chr5:65933292-65933010 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 48-242 |
| Cow position: | chr5:46611446-46611249 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 149, 32 |
| Conread position: | 48-321 |
| Cow position: | chr5:21937768-21937498 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 48-322 |
| Cow position: | chr5:41469449-41469721 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 112, 12 |
| Conread position: | 48-331 |
| Cow position: | chr5:68082320-68082045 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 148, 29 |
| Conread position: | 49-324 |
| Cow position: | chr5:39675805-39675533 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 128, 158 |
| Conread position: | 55-272 |
| Cow position: | chr5:58208389-58208618 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 55-319 |
| Cow position: | chr5:9894479-9894220 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 28 |
| Conread position: | 55-321 |
| Cow position: | chr5:40233779-40234042 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 55-322 |
| Cow position: | chr5:34888209-34887951 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 57-323 |
| Cow position: | chr5:35209825-35209562 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 105, 23 |
| Conread position: | 64-318 |
| Cow position: | chr5:42845946-42845698 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 100, 19 |
| Conread position: | 83-324 |
| Cow position: | chr5:34915813-34916053 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 172 |
| Conread position: | 95-322 |
| Cow position: | chr5:20555065-20554834 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 168 |
| Conread position: | 96-325 |
| Cow position: | chr5:41229396-41229626 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 153 |
| Conread position: | 102-323 |
| Cow position: | chr5:65752550-65752769 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 103-326 |
| Cow position: | chr5:5111385-5111159 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 103-331 |
| Cow position: | chr5:64392846-64393079 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 159 |
| Conread position: | 111-328 |
| Cow position: | chr5:4551832-4552053 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 120-331 |
| Cow position: | chr5:33347974-33348178 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 131 |
| Conread position: | 120-335 |
| Cow position: | chr5:18113864-18113647 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 138 |
| Conread position: | 166-328 |
| Cow position: | chr5:37714145-37713980 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 167-328 |
| Cow position: | chr5:29560170-29560329 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 131, 85 |
| Conread position: | 169-331 |
| Cow position: | chr5:68715596-68715754 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 76 |
| Conread position: | 179-331 |
| Cow position: | chr5:41636646-41636791 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 112, 65 |
Show alignments to all cow chromosomes.