Cow genome map
| Conread name: | rcsk07_o8.y1 |
| Conread position: | 1-169 |
| Cow position: | chr7:9928814-9928645 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-171 |
| Cow position: | chr7:47876180-47876001 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 1-173 |
| Cow position: | chr7:49467379-49467204 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-177 |
| Cow position: | chr7:39094489-39094313 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-211 |
| Cow position: | chr7:23477695-23477487 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 5, 50 |
| Conread position: | 1-228 |
| Cow position: | chr7:48480233-48479996 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-288 |
| Cow position: | chr7:26196186-26195892 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-321 |
| Cow position: | chr7:58841248-58841578 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 5, 92 |
| Conread position: | 1-322 |
| Cow position: | chr7:23447291-23446974 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 74 |
| Conread position: | 1-322 |
| Cow position: | chr7:36477454-36477784 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 5, 91 |
| Conread position: | 1-322 |
| Cow position: | chr7:56983809-56983477 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 5, 252 |
| Conread position: | 1-323 |
| Cow position: | chr7:3390327-3390652 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 1-323 |
| Cow position: | chr7:45099138-45099468 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 1-323 |
| Cow position: | chr7:47775478-47775797 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 5, 67 |
| Conread position: | 1-323 |
| Cow position: | chr7:59438080-59438400 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-323 |
| Cow position: | chr7:63085171-63085489 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 1-323 |
| Cow position: | chr7:63556197-63556538 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 5, 262 |
| Conread position: | 1-324 |
| Cow position: | chr7:23646214-23646537 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-325 |
| Cow position: | chr7:27388378-27388049 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-325 |
| Cow position: | chr7:34553851-34554196 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 1-328 |
| Cow position: | chr7:39498416-39498076 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-328 |
| Cow position: | chr7:59713074-59713404 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-329 |
| Cow position: | chr7:20289651-20289333 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 1-329 |
| Cow position: | chr7:40916184-40916525 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 1-330 |
| Cow position: | chr7:19400072-19399740 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 1-330 |
| Cow position: | chr7:42431431-42431763 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 75 |
| Conread position: | 1-330 |
| Cow position: | chr7:66894933-66894604 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 1-334 |
| Cow position: | chr7:20225231-20224882 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 5, 268 |
| Conread position: | 2-157 |
| Cow position: | chr7:23177107-23177267 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 2-242 |
| Cow position: | chr7:67760522-67760752 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 2-323 |
| Cow position: | chr7:58196318-58195998 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 172, 76 |
| Conread position: | 4-186 |
| Cow position: | chr7:9550-9730 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 4-322 |
| Cow position: | chr7:21526796-21526476 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 76 |
| Conread position: | 4-322 |
| Cow position: | chr7:43490090-43490412 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 158, 73 |
| Conread position: | 4-322 |
| Cow position: | chr7:46187862-46188179 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 4-322 |
| Cow position: | chr7:50449301-50449620 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 4-323 |
| Cow position: | chr7:15654464-15654145 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 154, 79 |
| Conread position: | 4-324 |
| Cow position: | chr7:43907822-43908137 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 163, 72 |
| Conread position: | 4-325 |
| Cow position: | chr7:4418853-4418530 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 4-326 |
| Cow position: | chr7:53698307-53697979 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 106, 73 |
| Conread position: | 4-328 |
| Cow position: | chr7:759008-758684 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 158, 76 |
| Conread position: | 5-141 |
| Cow position: | chr7:40305979-40305844 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 5-151 |
| Cow position: | chr7:65818880-65818736 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 5-156 |
| Cow position: | chr7:4840450-4840600 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 5-157 |
| Cow position: | chr7:23090922-23091075 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-173 |
| Cow position: | chr7:15607999-15608172 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 5-173 |
| Cow position: | chr7:61762966-61763139 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 5-186 |
| Cow position: | chr7:34083287-34083471 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 5-242 |
| Cow position: | chr7:10760248-10760006 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-259 |
| Cow position: | chr7:43940947-43941214 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 5-269 |
| Cow position: | chr7:11783807-11783540 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 139, 72 |
| Conread position: | 5-282 |
| Cow position: | chr7:47771368-47771089 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 5-316 |
| Cow position: | chr7:44039106-44039410 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 72 |
| Conread position: | 5-319 |
| Cow position: | chr7:35779060-35779373 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 5-320 |
| Cow position: | chr7:12659384-12659065 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 42 |
| Conread position: | 5-320 |
| Cow position: | chr7:58644336-58644661 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 5-320 |
| Cow position: | chr7:68050725-68051028 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 192, 72 |
| Conread position: | 5-321 |
| Cow position: | chr7:31171336-31171024 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 164, 78 |
| Conread position: | 5-322 |
| Cow position: | chr7:63771514-63771834 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-323 |
| Cow position: | chr7:5241734-5242047 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 42 |
| Conread position: | 5-323 |
| Cow position: | chr7:9193630-9193315 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 72 |
| Conread position: | 5-323 |
| Cow position: | chr7:13645750-13645425 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 105, 76 |
| Conread position: | 5-323 |
| Cow position: | chr7:19414861-19414540 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-323 |
| Cow position: | chr7:26012025-26012357 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 5-323 |
| Cow position: | chr7:46117038-46116720 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 56 |
| Conread position: | 5-323 |
| Cow position: | chr7:62602809-62603112 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 198, 72 |
| Conread position: | 5-323 |
| Cow position: | chr7:65276974-65277291 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 5-323 |
| Cow position: | chr7:68776873-68776551 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 5-324 |
| Cow position: | chr7:17816372-17816684 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 61 |
| Conread position: | 5-324 |
| Cow position: | chr7:23619473-23619155 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 5-324 |
| Cow position: | chr7:29301140-29300826 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 135, 78 |
| Conread position: | 5-324 |
| Cow position: | chr7:38081771-38082086 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 5-324 |
| Cow position: | chr7:41328409-41328110 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 255, 70 |
| Conread position: | 5-324 |
| Cow position: | chr7:48667037-48667354 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 136, 72 |
| Conread position: | 5-326 |
| Cow position: | chr7:43109913-43109600 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 153, 97 |
| Conread position: | 5-326 |
| Cow position: | chr7:49942801-49942494 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 172, 76 |
| Conread position: | 5-328 |
| Cow position: | chr7:15566381-15566692 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 5-328 |
| Cow position: | chr7:22632674-22632349 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 80 |
| Conread position: | 5-328 |
| Cow position: | chr7:48751985-48751664 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 84 |
| Conread position: | 5-330 |
| Cow position: | chr7:34428172-34428509 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 5-397 |
| Cow position: | chr7:18289010-18288611 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 6-125 |
| Cow position: | chr7:39988054-39988169 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 6-151 |
| Cow position: | chr7:63947270-63947126 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 141, 71 |
| Conread position: | 6-157 |
| Cow position: | chr7:34568773-34568929 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 77 |
| Conread position: | 6-174 |
| Cow position: | chr7:26737705-26737538 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 6-234 |
| Cow position: | chr7:29087946-29088173 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 159, 56 |
| Conread position: | 6-237 |
| Cow position: | chr7:39903716-39903952 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 152, 77 |
| Conread position: | 6-242 |
| Cow position: | chr7:47173235-47172989 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 6-242 |
| Cow position: | chr7:63569720-63569479 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 6-272 |
| Cow position: | chr7:52214653-52214380 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-297 |
| Cow position: | chr7:51674271-51673983 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 197, 71 |
| Conread position: | 6-320 |
| Cow position: | chr7:48243289-48243600 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 71, 76 |
| Conread position: | 6-320 |
| Cow position: | chr7:62193181-62193493 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 157, 40 |
| Conread position: | 6-320 |
| Cow position: | chr7:68170994-68170673 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 159, 71 |
| Conread position: | 6-321 |
| Cow position: | chr7:58904921-58904602 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr7:1392388-1392708 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 6-322 |
| Cow position: | chr7:6057741-6058063 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 138, 69 |
| Conread position: | 6-322 |
| Cow position: | chr7:7864221-7864542 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 156, 273 |
| Conread position: | 6-322 |
| Cow position: | chr7:18639853-18639533 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 6-322 |
| Cow position: | chr7:20062825-20063137 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr7:20119587-20119267 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr7:22597731-22597411 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr7:22810968-22810648 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr7:26632198-26631886 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 71 |
| Conread position: | 6-322 |
| Cow position: | chr7:29110178-29109858 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chr7:30721465-30721784 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 6-323 |
| Cow position: | chr7:53992314-53992628 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 75 |
| Conread position: | 6-323 |
| Cow position: | chr7:59660361-59660677 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 6-324 |
| Cow position: | chr7:24990895-24991206 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 152, 71 |
| Conread position: | 6-324 |
| Cow position: | chr7:46148490-46148792 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 197, 71 |
| Conread position: | 6-326 |
| Cow position: | chr7:12994772-12995093 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 6-326 |
| Cow position: | chr7:50262789-50262464 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-330 |
| Cow position: | chr7:56098220-56098547 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 49, 80 |
| Conread position: | 6-330 |
| Cow position: | chr7:68867720-68868045 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 41, 60 |
| Conread position: | 7-319 |
| Cow position: | chr7:35652463-35652154 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 70 |
| Conread position: | 8-138 |
| Cow position: | chr7:33719597-33719726 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 8-237 |
| Cow position: | chr7:53772693-53772466 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 162, 69 |
| Conread position: | 8-278 |
| Cow position: | chr7:23099426-23099151 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 8-323 |
| Cow position: | chr7:24797073-24796764 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 156, 7 |
| Conread position: | 10-324 |
| Cow position: | chr7:60483807-60483496 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 136, 70 |
| Conread position: | 11-157 |
| Cow position: | chr7:1558235-1558379 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 11-237 |
| Cow position: | chr7:60756904-60756677 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 147, 72 |
| Conread position: | 11-274 |
| Cow position: | chr7:14542434-14542164 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 151, 66 |
| Conread position: | 11-321 |
| Cow position: | chr7:19051694-19051395 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 11-322 |
| Cow position: | chr7:57259412-57259100 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 147, 66 |
| Conread position: | 12-236 |
| Cow position: | chr7:6270316-6270544 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 13-331 |
| Cow position: | chr7:18248189-18247868 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 146, 64 |
| Conread position: | 15-175 |
| Cow position: | chr7:3027313-3027151 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 142, 68 |
| Conread position: | 21-228 |
| Cow position: | chr7:22652927-22652714 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 141, 60 |
| Conread position: | 23-330 |
| Cow position: | chr7:58966904-58967205 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 139, 57 |
| Conread position: | 24-321 |
| Cow position: | chr7:60869363-60869659 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 44-325 |
| Cow position: | chr7:39042256-39042535 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 44-325 |
| Cow position: | chr7:68088283-68088559 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 159, 36 |
| Conread position: | 44-328 |
| Cow position: | chr7:34198975-34199262 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 118, 36 |
| Conread position: | 44-330 |
| Cow position: | chr7:28561404-28561112 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 22 |
| Conread position: | 44-330 |
| Cow position: | chr7:39551280-39550996 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 125, 33 |
| Conread position: | 47-330 |
| Cow position: | chr7:34004021-34004303 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 48-206 |
| Cow position: | chr7:14028697-14028852 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 132, 13 |
| Conread position: | 49-298 |
| Cow position: | chr7:17210494-17210242 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 50-322 |
| Cow position: | chr7:21240455-21240186 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 198 |
| Conread position: | 55-323 |
| Cow position: | chr7:18391236-18391502 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 22 |
| Conread position: | 55-328 |
| Cow position: | chr7:51708729-51708449 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 57-325 |
| Cow position: | chr7:28089904-28090164 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 59-288 |
| Cow position: | chr7:2896427-2896654 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 67-327 |
| Cow position: | chr7:29474366-29474625 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 77-322 |
| Cow position: | chr7:27329678-27329928 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 85, 202 |
| Conread position: | 77-328 |
| Cow position: | chr7:65618564-65618312 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 15, 172 |
| Conread position: | 80-328 |
| Cow position: | chr7:40758560-40758307 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 97, 169 |
| Conread position: | 92-326 |
| Cow position: | chr7:56615153-56615385 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 109-330 |
| Cow position: | chr7:20415589-20415368 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 55, 145 |
| Conread position: | 143-323 |
| Cow position: | chr7:26911686-26911512 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 109 |
| Conread position: | 166-322 |
| Cow position: | chr7:15608187-15608342 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 83 |
| Conread position: | 167-322 |
| Cow position: | chr7:3134670-3134515 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 78 |
| Conread position: | 186-330 |
| Cow position: | chr7:11872801-11872658 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 58 |
Show alignments to all cow chromosomes.