Cow genome map

Conread name: rcsk07_o8.y1

Conread position: 1-137
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 83

Conread position: 1-151
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 46

Conread position: 1-152
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 83

Conread position: 1-157
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 78

Conread position: 1-157
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 83

Conread position: 1-157
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 89

Conread position: 1-157
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 77

Conread position: 1-157
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 89

Conread position: 1-173
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 119

Conread position: 1-176
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 84

Conread position: 1-236
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 77

Conread position: 1-236
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 89

Conread position: 1-269
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 5, 87

Conread position: 1-271
Cow position:
Alignm length: 281
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 56

Conread position: 1-289
Cow position:
Alignm length: 296
Alignm identity: 193
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 13

Conread position: 1-314
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 59

Conread position: 1-319
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 5, 77

Conread position: 1-321
Cow position:
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 86

Conread position: 1-322
Cow position:
Alignm length: 331
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 5, 37

Conread position: 1-324
Cow position:
Alignm length: 333
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 5, 74

Conread position: 1-324
Cow position:
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 77

Conread position: 1-325
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 5, 83

Conread position: 1-328
Cow position:
Alignm length: 338
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 77

Conread position: 1-330
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 5, 80

Conread position: 1-331
Cow position:
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 80

Conread position: 3-264
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 5, 75

Conread position: 4-316
Cow position:
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 73

Conread position: 4-323
Cow position:
Alignm length: 328
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 33

Conread position: 4-323
Cow position:
Alignm length: 330
Alignm identity: 231
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 52

Conread position: 4-323
Cow position:
Alignm length: 334
Alignm identity: 222
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 79

Conread position: 4-335
Cow position:
Alignm length: 342
Alignm identity: 233
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 153, 76

Conread position: 5-141
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 78

Conread position: 5-146
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 78

Conread position: 5-151
Cow position:
Alignm length: 147
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 5-153
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 78

Conread position: 5-154
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 5-157
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 78

Conread position: 5-157
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 5-163
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 81

Conread position: 5-165
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 5-165
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 5-189
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 78

Conread position: 5-215
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 153, 72

Conread position: 5-228
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 72

Conread position: 5-242
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 51

Conread position: 5-269
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 157, 72

Conread position: 5-269
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 153, 70

Conread position: 5-273
Cow position:
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 6

Conread position: 5-282
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 159, 72

Conread position: 5-286
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 41, 76

Conread position: 5-320
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 65, 73

Conread position: 5-321
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 198, 75

Conread position: 5-321
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 32

Conread position: 5-322
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 157, 75

Conread position: 5-322
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 75

Conread position: 5-323
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 153, 70

Conread position: 5-323
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 84

Conread position: 5-323
Cow position:
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 57

Conread position: 5-323
Cow position:
Alignm length: 325
Alignm identity: 222
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 157, 75

Conread position: 5-324
Cow position:
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 78

Conread position: 5-324
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 32

Conread position: 5-324
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 153, 72

Conread position: 5-324
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 152, 56

Conread position: 5-325
Cow position:
Alignm length: 334
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 152, 78

Conread position: 5-325
Cow position:
Alignm length: 329
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 51

Conread position: 5-328
Cow position:
Alignm length: 329
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 72

Conread position: 5-328
Cow position:
Alignm length: 339
Alignm identity: 236
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 78

Conread position: 5-328
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 75

Conread position: 5-328
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 61, 73

Conread position: 5-329
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 157, 48

Conread position: 5-329
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 76

Conread position: 5-331
Cow position:
Alignm length: 344
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 83

Conread position: 6-157
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 65

Conread position: 6-194
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 37

Conread position: 6-237
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 197, 74

Conread position: 6-241
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 152, 69

Conread position: 6-242
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 156, 71

Conread position: 6-318
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 156, 71

Conread position: 6-322
Cow position:
Alignm length: 328
Alignm identity: 220
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 123, 71

Conread position: 6-322
Cow position:
Alignm length: 329
Alignm identity: 217
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 156, 71

Conread position: 6-322
Cow position:
Alignm length: 326
Alignm identity: 221
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 24, 42

Conread position: 6-322
Cow position:
Alignm length: 325
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 156, 71

Conread position: 6-322
Cow position:
Alignm length: 324
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 50

Conread position: 6-322
Cow position:
Alignm length: 326
Alignm identity: 217
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 50

Conread position: 6-322
Cow position:
Alignm length: 325
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 74

Conread position: 6-324
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 152, 71

Conread position: 6-324
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 31

Conread position: 6-324
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 152, 40

Conread position: 6-328
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 82

Conread position: 6-336
Cow position:
Alignm length: 338
Alignm identity: 235
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 50

Conread position: 7-157
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 7-234
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 170, 70

Conread position: 7-289
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 82

Conread position: 7-336
Cow position:
Alignm length: 339
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 70

Conread position: 8-176
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 156, 67

Conread position: 8-322
Cow position:
Alignm length: 324
Alignm identity: 220
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 35, 49

Conread position: 8-323
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 154, 62

Conread position: 8-323
Cow position:
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 69

Conread position: 11-157
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 11-315
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 61, 251

Conread position: 11-323
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 19, 26

Conread position: 11-324
Cow position:
Alignm length: 321
Alignm identity: 221
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 147, 66

Conread position: 11-324
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 66

Conread position: 12-171
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 72

Conread position: 17-252
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 130, 60

Conread position: 17-328
Cow position:
Alignm length: 321
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 40

Conread position: 18-322
Cow position:
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 38

Conread position: 21-330
Cow position:
Alignm length: 337
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 64

Conread position: 23-324
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 61

Conread position: 26-329
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 131, 54

Conread position: 35-316
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 45

Conread position: 36-326
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 45

Conread position: 38-328
Cow position:
Alignm length: 292
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 165, 9

Conread position: 44-323
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 116, 39

Conread position: 44-329
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 36

Conread position: 44-330
Cow position:
Alignm length: 304
Alignm identity: 209
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 76

Conread position: 47-324
Cow position:
Alignm length: 283
Alignm identity: 204
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 121, 33

Conread position: 48-237
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 33

Conread position: 52-268
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 130, 25

Conread position: 52-328
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 109, 29

Conread position: 54-322
Cow position:
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 27

Conread position: 56-323
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 106, 24

Conread position: 60-321
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 20

Conread position: 61-321
Cow position:
Alignm length: 263
Alignm identity: 168
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 116, 16

Conread position: 62-272
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 111, 21

Conread position: 62-325
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 110, 18

Conread position: 65-322
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 15

Conread position: 79-243
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 83-328
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 79, 169

Conread position: 84-323
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 73, 124

Conread position: 89-325
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 21

Conread position: 90-319
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 72, 18

Conread position: 102-336
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 156

Conread position: 104-325
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 104

Conread position: 106-325
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 115

Conread position: 110-322
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 147

Conread position: 122-322
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 136

Conread position: 166-331
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 42

Conread position: 168-325
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 169-331
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 75

Show alignments to all cow chromosomes.