Cow genome map
| Conread name: | rcsk07_o8.y1 |
| Conread position: | 1-137 |
| Cow position: | chrX:3145593-3145735 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-151 |
| Cow position: | chrX:28878664-28878513 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 46 |
| Conread position: | 1-152 |
| Cow position: | chrX:6695759-6695603 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-157 |
| Cow position: | chrX:7513082-7513238 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 5, 78 |
| Conread position: | 1-157 |
| Cow position: | chrX:8517193-8517355 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-157 |
| Cow position: | chrX:17265461-17265299 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 1-157 |
| Cow position: | chrX:24366359-24366203 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-157 |
| Cow position: | chrX:41682946-41683108 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 1-173 |
| Cow position: | chrX:38549000-38549175 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 5, 119 |
| Conread position: | 1-176 |
| Cow position: | chrX:31385309-31385486 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 84 |
| Conread position: | 1-236 |
| Cow position: | chrX:12115632-12115871 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-236 |
| Cow position: | chrX:21319283-21319521 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 1-269 |
| Cow position: | chrX:27019796-27020064 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 5, 87 |
| Conread position: | 1-271 |
| Cow position: | chrX:34554326-34554597 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 1-289 |
| Cow position: | chrX:41304152-41303864 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 5, 13 |
| Conread position: | 1-314 |
| Cow position: | chrX:8899616-8899933 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 5, 59 |
| Conread position: | 1-319 |
| Cow position: | chrX:31489103-31489420 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-321 |
| Cow position: | chrX:39546388-39546061 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 1-322 |
| Cow position: | chrX:41879339-41879019 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 5, 37 |
| Conread position: | 1-324 |
| Cow position: | chrX:30162597-30162911 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 5, 74 |
| Conread position: | 1-324 |
| Cow position: | chrX:40269067-40269403 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-325 |
| Cow position: | chrX:1616466-1616128 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 1-328 |
| Cow position: | chrX:11581528-11581860 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 77 |
| Conread position: | 1-330 |
| Cow position: | chrX:34238311-34238641 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 1-331 |
| Cow position: | chrX:10866276-10865945 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 3-264 |
| Cow position: | chrX:29723044-29723314 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 5, 75 |
| Conread position: | 4-316 |
| Cow position: | chrX:32871191-32870876 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 73 |
| Conread position: | 4-323 |
| Cow position: | chrX:2479032-2478710 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 28, 33 |
| Conread position: | 4-323 |
| Cow position: | chrX:30143689-30143367 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 4-323 |
| Cow position: | chrX:41733601-41733276 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 79 |
| Conread position: | 4-335 |
| Cow position: | chrX:16703265-16703601 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 153, 76 |
| Conread position: | 5-141 |
| Cow position: | chrX:2146908-2147049 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 5-146 |
| Cow position: | chrX:6203100-6203245 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 5-151 |
| Cow position: | chrX:40475245-40475100 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 5-153 |
| Cow position: | chrX:16284384-16284231 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 5-154 |
| Cow position: | chrX:33799491-33799637 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 5-157 |
| Cow position: | chrX:16324657-16324500 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 5-157 |
| Cow position: | chrX:47243707-47243556 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 5-163 |
| Cow position: | chrX:34993766-34993929 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 5-165 |
| Cow position: | chrX:36975440-36975599 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 5-165 |
| Cow position: | chrX:41884841-41884682 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 5-189 |
| Cow position: | chrX:158238-158050 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 78 |
| Conread position: | 5-215 |
| Cow position: | chrX:10256546-10256333 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-228 |
| Cow position: | chrX:38067117-38066889 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 144, 72 |
| Conread position: | 5-242 |
| Cow position: | chrX:31729054-31729294 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 47, 51 |
| Conread position: | 5-269 |
| Cow position: | chrX:12096650-12096381 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 157, 72 |
| Conread position: | 5-269 |
| Cow position: | chrX:35409264-35409530 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 153, 70 |
| Conread position: | 5-273 |
| Cow position: | chrX:39556219-39555945 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 6 |
| Conread position: | 5-282 |
| Cow position: | chrX:12290333-12290611 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 159, 72 |
| Conread position: | 5-286 |
| Cow position: | chrX:9651450-9651163 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 5-320 |
| Cow position: | chrX:878774-878466 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 65, 73 |
| Conread position: | 5-321 |
| Cow position: | chrX:17794591-17794895 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 198, 75 |
| Conread position: | 5-321 |
| Cow position: | chrX:22811482-22811801 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 5-322 |
| Cow position: | chrX:27095715-27096029 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 157, 75 |
| Conread position: | 5-322 |
| Cow position: | chrX:31949334-31949023 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 153, 75 |
| Conread position: | 5-323 |
| Cow position: | chrX:26441184-26440865 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 153, 70 |
| Conread position: | 5-323 |
| Cow position: | chrX:27486000-27486324 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 44, 84 |
| Conread position: | 5-323 |
| Cow position: | chrX:27516130-27516442 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 57 |
| Conread position: | 5-323 |
| Cow position: | chrX:35240460-35240780 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 157, 75 |
| Conread position: | 5-324 |
| Cow position: | chrX:31261041-31260711 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 5-324 |
| Cow position: | chrX:35223898-35224211 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 5-324 |
| Cow position: | chrX:35268489-35268797 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 5-324 |
| Cow position: | chrX:48287835-48287534 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 152, 56 |
| Conread position: | 5-325 |
| Cow position: | chrX:12249397-12249719 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 152, 78 |
| Conread position: | 5-325 |
| Cow position: | chrX:22812658-22812980 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 5-328 |
| Cow position: | chrX:15329249-15329569 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 72 |
| Conread position: | 5-328 |
| Cow position: | chrX:20504357-20504675 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 5-328 |
| Cow position: | chrX:32743134-32743453 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 75 |
| Conread position: | 5-328 |
| Cow position: | chrX:41192285-41192605 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 61, 73 |
| Conread position: | 5-329 |
| Cow position: | chrX:1810563-1810244 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 157, 48 |
| Conread position: | 5-329 |
| Cow position: | chrX:44054400-44054722 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 5-331 |
| Cow position: | chrX:38936287-38936622 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 6-157 |
| Cow position: | chrX:13785781-13785631 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 6-194 |
| Cow position: | chrX:8869788-8869597 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 6-237 |
| Cow position: | chrX:45113233-45113461 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 197, 74 |
| Conread position: | 6-241 |
| Cow position: | chrX:2351659-2351899 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 152, 69 |
| Conread position: | 6-242 |
| Cow position: | chrX:10992215-10992456 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-318 |
| Cow position: | chrX:34413373-34413689 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chrX:1055796-1055480 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 123, 71 |
| Conread position: | 6-322 |
| Cow position: | chrX:3417542-3417223 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chrX:24969219-24968899 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 6-322 |
| Cow position: | chrX:27404348-27404029 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 6-322 |
| Cow position: | chrX:32331228-32331544 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 6-322 |
| Cow position: | chrX:36195689-36196009 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 6-322 |
| Cow position: | chrX:38094928-38094610 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 74 |
| Conread position: | 6-324 |
| Cow position: | chrX:14884365-14884043 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 152, 71 |
| Conread position: | 6-324 |
| Cow position: | chrX:34376551-34376862 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 6-324 |
| Cow position: | chrX:38439073-38439393 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 152, 40 |
| Conread position: | 6-328 |
| Cow position: | chrX:160443-160114 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 6-336 |
| Cow position: | chrX:28097728-28098047 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 7-157 |
| Cow position: | chrX:33493330-33493479 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 7-234 |
| Cow position: | chrX:12437637-12437410 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 170, 70 |
| Conread position: | 7-289 |
| Cow position: | chrX:20957613-20957895 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 7-336 |
| Cow position: | chrX:42086460-42086793 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 70 |
| Conread position: | 8-176 |
| Cow position: | chrX:35847814-35847982 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 156, 67 |
| Conread position: | 8-322 |
| Cow position: | chrX:20617198-20616880 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 8-323 |
| Cow position: | chrX:15147582-15147275 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 154, 62 |
| Conread position: | 8-323 |
| Cow position: | chrX:21665992-21665680 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 69 |
| Conread position: | 11-157 |
| Cow position: | chrX:44961315-44961460 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 11-315 |
| Cow position: | chrX:42171697-42171390 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 61, 251 |
| Conread position: | 11-323 |
| Cow position: | chrX:42462146-42461830 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 11-324 |
| Cow position: | chrX:13648182-13647870 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 147, 66 |
| Conread position: | 11-324 |
| Cow position: | chrX:28632875-28632568 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 153, 66 |
| Conread position: | 12-171 |
| Cow position: | chrX:38999499-38999661 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 17-252 |
| Cow position: | chrX:27117575-27117812 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 130, 60 |
| Conread position: | 17-328 |
| Cow position: | chrX:5871921-5872236 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 36, 40 |
| Conread position: | 18-322 |
| Cow position: | chrX:42247566-42247272 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 38 |
| Conread position: | 21-330 |
| Cow position: | chrX:39700825-39701151 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 64 |
| Conread position: | 23-324 |
| Cow position: | chrX:7718466-7718771 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 26-329 |
| Cow position: | chrX:19290389-19290687 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 131, 54 |
| Conread position: | 35-316 |
| Cow position: | chrX:28105552-28105828 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 127, 45 |
| Conread position: | 36-326 |
| Cow position: | chrX:20697977-20697689 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 38-328 |
| Cow position: | chrX:25283510-25283231 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 165, 9 |
| Conread position: | 44-323 |
| Cow position: | chrX:2300566-2300841 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 116, 39 |
| Conread position: | 44-329 |
| Cow position: | chrX:25848550-25848840 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 114, 36 |
| Conread position: | 44-330 |
| Cow position: | chrX:23696780-23696489 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 47-324 |
| Cow position: | chrX:34502561-34502837 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 121, 33 |
| Conread position: | 48-237 |
| Cow position: | chrX:37760506-37760699 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 52-268 |
| Cow position: | chrX:28787014-28787227 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 130, 25 |
| Conread position: | 52-328 |
| Cow position: | chrX:17271645-17271366 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 54-322 |
| Cow position: | chrX:47743723-47743992 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 56-323 |
| Cow position: | chrX:31443173-31442908 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 60-321 |
| Cow position: | chrX:32171231-32170976 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 61-321 |
| Cow position: | chrX:44396672-44396931 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 116, 16 |
| Conread position: | 62-272 |
| Cow position: | chrX:24231466-24231254 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 111, 21 |
| Conread position: | 62-325 |
| Cow position: | chrX:25232239-25232506 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 65-322 |
| Cow position: | chrX:24758041-24757780 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 79-243 |
| Cow position: | chrX:8103424-8103254 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 83-328 |
| Cow position: | chrX:25337850-25338102 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 79, 169 |
| Conread position: | 84-323 |
| Cow position: | chrX:15545571-15545807 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 73, 124 |
| Conread position: | 89-325 |
| Cow position: | chrX:26619682-26619445 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 75, 21 |
| Conread position: | 90-319 |
| Cow position: | chrX:28157167-28157405 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 102-336 |
| Cow position: | chrX:19188628-19188863 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 60, 156 |
| Conread position: | 104-325 |
| Cow position: | chrX:11314084-11313862 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 104 |
| Conread position: | 106-325 |
| Cow position: | chrX:5047201-5046987 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 115 |
| Conread position: | 110-322 |
| Cow position: | chrX:33020186-33020398 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 122-322 |
| Cow position: | chrX:46723029-46722824 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 136 |
| Conread position: | 166-331 |
| Cow position: | chrX:23414607-23414439 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 168-325 |
| Cow position: | chrX:30421176-30421013 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 169-331 |
| Cow position: | chrX:9837902-9838064 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 75 |
Show alignments to all cow chromosomes.