Cow genome map


           Conread name:
           rcsk08_h15.y1
        

               Conread position:
               1-255
               

               Cow position:
               chr21:34222800-34222546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               237, 243
               

               Conread position:
               1-342
               

               Cow position:
               chr21:12608426-12608085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               311, 316
               

               Conread position:
               6-300
               

               Cow position:
               chr21:12608253-12607958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               7-355
               

               Cow position:
               chr21:12659006-12659354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               82, 94
               

               Conread position:
               8-339
               

               Cow position:
               chr21:34222877-34222546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               314, 320
               

               Conread position:
               8-342
               

               Cow position:
               chr21:34223045-34222711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               226, 220
               

               Conread position:
               8-348
               

               Cow position:
               chr21:34222961-34222621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               226, 214
               

               Conread position:
               23-354
               

               Cow position:
               chr21:12608908-12608577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               211, 204
               

               Conread position:
               77-339
               

               Cow position:
               chr21:12608266-12608004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               126, 140
               

               Conread position:
               86-348
               

               Cow position:
               chr21:34223051-34222789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               131, 118
               
Show alignments to all cow chromosomes.