Cow genome map


           Conread name:
           rcsk08_h15.y1
        

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 138
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               271, 276
               

               Conread position:
               1-340
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               130, 149
               

               Conread position:
               1-348
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               224, 211
               

               Conread position:
               1-352
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               130, 139
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 293
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               146, 125
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 96
               

               Conread position:
               2-257
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               230, 216
               

               Conread position:
               2-354
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               139, 133
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               129, 138
               

               Conread position:
               2-358
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 49
               

               Conread position:
               3-358
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               140, 134
               

               Conread position:
               7-285
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               7-339
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               112, 126
               

               Conread position:
               7-348
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-348
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               82, 90
               

               Conread position:
               7-355
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               143, 128
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               134, 113
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 69
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               227, 215
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               118, 132
               

               Conread position:
               7-364
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               119, 130
               

               Conread position:
               7-365
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 69
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               112, 132
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               50, 43
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               49, 43
               

               Conread position:
               7-375
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               302, 288
               

               Conread position:
               8-333
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-348
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-350
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               226, 218
               

               Conread position:
               8-354
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               288, 306
               

               Conread position:
               8-355
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               147, 106
               

               Conread position:
               8-356
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               8-356
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               226, 204
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               117, 131
               

               Conread position:
               8-360
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 299
               

               Conread position:
               8-360
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               119, 141
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 5
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               224, 219
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               123, 132
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               224, 219
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               276, 283
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 199
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 306
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               132, 117
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               290, 302
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 115
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               211, 203
               

               Conread position:
               8-379
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               149, 125
               

               Conread position:
               9-365
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               10-341
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               11-247
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               132, 122
               

               Conread position:
               11-339
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               223, 210
               

               Conread position:
               11-341
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-357
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               276, 285
               

               Conread position:
               11-357
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               141, 123
               

               Conread position:
               11-364
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               11-365
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               11-365
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-365
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               192, 215
               

               Conread position:
               11-367
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               223, 217
               

               Conread position:
               11-374
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               307, 283
               

               Conread position:
               17-375
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               217, 211
               

               Conread position:
               22-339
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 204
               

               Conread position:
               23-358
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               193, 210
               

               Conread position:
               23-365
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               129, 112
               

               Conread position:
               26-355
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               112, 100
               

               Conread position:
               50-341
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               64-368
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               171, 163
               

               Conread position:
               64-368
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               71-365
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-348
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               136, 130
               

               Conread position:
               100-365
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               128, 111
               

               Conread position:
               101-375
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               172, 34
               

               Conread position:
               131-365
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               147-334
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               88, 82
               
Show alignments to all cow chromosomes.