Cow genome map
| Conread name: | rcsk08_h15.y1 |
| Conread position: | 1-339 |
| Cow position: | chr24:17078262-17077924 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 172, 180 |
| Conread position: | 1-347 |
| Cow position: | chr24:17077842-17077497 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 338, 0 |
| Conread position: | 1-365 |
| Cow position: | chr24:17036295-17035931 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 233, 227 |
| Conread position: | 1-375 |
| Cow position: | chr24:17070542-17070916 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 256, 263 |
| Conread position: | 7-338 |
| Cow position: | chr24:17070716-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 82, 90 |
| Conread position: | 7-357 |
| Cow position: | chr24:17036205-17035855 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-339 |
| Cow position: | chr24:17035952-17035621 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 81, 94 |
| Conread position: | 8-339 |
| Cow position: | chr24:17036036-17035705 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-341 |
| Cow position: | chr24:17035700-17035367 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 81, 94 |
| Conread position: | 8-348 |
| Cow position: | chr24:17070633-17070973 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 146, 109 |
| Conread position: | 8-356 |
| Cow position: | chr24:17036540-17036192 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 226, 220 |
| Conread position: | 8-356 |
| Cow position: | chr24:17077919-17077571 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 225, 218 |
| Conread position: | 8-357 |
| Cow position: | chr24:17035616-17035267 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 309, 303 |
| Conread position: | 8-357 |
| Cow position: | chr24:17036120-17035771 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 90, 94 |
| Conread position: | 8-357 |
| Cow position: | chr24:17036372-17036023 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-339 |
| Cow position: | chr24:17078002-17077672 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 226, 219 |
| Conread position: | 11-365 |
| Cow position: | chr24:17070468-17070822 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 220, 209 |
| Conread position: | 11-375 |
| Cow position: | chr24:17078084-17077720 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 223, 217 |
| Conread position: | 22-280 |
| Cow position: | chr24:17013268-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 23-368 |
| Cow position: | chr24:17013185-17013529 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 115, 104 |
| Conread position: | 26-368 |
| Cow position: | chr24:17078153-17077811 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 71 |
| Conread position: | 32-339 |
| Cow position: | chr24:17035508-17035201 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-341 |
| Cow position: | chr24:17035759-17035451 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 32-354 |
| Cow position: | chr24:17036432-17036110 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-355 |
| Cow position: | chr24:17070422-17070728 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 56-357 |
| Cow position: | chr24:17035820-17035519 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 178, 172 |
Show alignments to all cow chromosomes.