Cow genome map


           Conread name:
           rcsk08_h15.y1
        

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               229, 219
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               71, 61
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               140, 128
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               69, 75
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-341
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               155, 133
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               255, 83
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               155, 130
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-348
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               138, 20
               

               Conread position:
               6-365
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               239
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               229, 221
               

               Conread position:
               7-270
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               258, 0
               

               Conread position:
               7-283
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               210, 197
               

               Conread position:
               7-286
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               7-330
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-339
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               272, 267
               

               Conread position:
               7-339
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               7-348
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               202, 210
               

               Conread position:
               7-348
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               7-348
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               217, 204
               

               Conread position:
               7-356
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               82, 90
               

               Conread position:
               7-356
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               281, 293
               

               Conread position:
               7-356
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               227, 197
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               7-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-365
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               7-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-365
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               307, 290
               

               Conread position:
               7-375
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               7-375
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               193, 224
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-336
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               29, 46
               

               Conread position:
               8-339
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               136, 120
               

               Conread position:
               8-339
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               123, 140
               

               Conread position:
               8-341
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-341
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               148, 126
               

               Conread position:
               8-348
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               213, 226
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               123, 131
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               230, 98
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 127
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 212
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-372
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 48
               

               Conread position:
               8-374
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               201, 226
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 124
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 132
               

               Conread position:
               8-380
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               117, 132
               

               Conread position:
               9-375
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               135, 125
               

               Conread position:
               11-365
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               12-285
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 121
               

               Conread position:
               12-357
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               14-294
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 62
               

               Conread position:
               16-360
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               179, 104
               

               Conread position:
               16-365
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               19-356
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               196, 187
               

               Conread position:
               22-339
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               183, 103
               

               Conread position:
               22-368
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               103, 118
               

               Conread position:
               23-356
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 188
               

               Conread position:
               23-357
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 0
               

               Conread position:
               25-365
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               115, 100
               

               Conread position:
               26-337
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               191, 175
               

               Conread position:
               29-357
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               59-351
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 72
               

               Conread position:
               59-365
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               60-375
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               71-355
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               72-348
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               74-339
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               131, 146
               

               Conread position:
               77-348
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               79-355
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               79-357
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               140, 145
               

               Conread position:
               83-339
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               86-348
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               115, 132
               

               Conread position:
               104-357
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 27
               
Show alignments to all cow chromosomes.