Cow genome map

Conread name: rcsk08_h15.y1

Conread position: 1-270
Cow position: chr28:7810674-7810943 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 129

Conread position: 1-339
Cow position: chr28:9253186-9253524 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 210
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 233, 205

Conread position: 1-348
Cow position: chr28:7758407-7758754 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 130, 140

Conread position: 1-353
Cow position: chr28:7758491-7758845 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 116, 128

Conread position: 1-368
Cow position: chr28:9298651-9299014 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 15

Conread position: 2-337
Cow position: chr28:11333717-11333389 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 215
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 231, 224

Conread position: 6-332
Cow position: chr28:34696252-34696578 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 229, 223

Conread position: 6-339
Cow position: chr28:9298821-9299152 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 35, 45

Conread position: 6-375
Cow position: chr28:34673360-34673728 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 223
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 6

Conread position: 7-348
Cow position: chr28:34696001-34696342 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 310, 304

Conread position: 7-348
Cow position: chr28:34696085-34696426 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 310, 305

Conread position: 7-357
Cow position: chr28:7810596-7810946 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 29

Conread position: 8-332
Cow position: chr28:7758010-7758334 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 123, 132

Conread position: 8-336
Cow position: chr28:33210234-33210562 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 62, 68

Conread position: 8-347
Cow position: chr28:9253277-9253618 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 81, 94

Conread position: 8-348
Cow position: chr28:7810438-7810769 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 215
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 87

Conread position: 8-354
Cow position: chr28:11333879-11333533 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 133, 125

Conread position: 8-356
Cow position: chr28:9290178-9290520 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 225
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 117, 32

Conread position: 8-357
Cow position: chr28:7757590-7757939 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 201, 226

Conread position: 8-357
Cow position: chr28:9253109-9253458 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 228
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 44

Conread position: 8-365
Cow position: chr28:7757674-7758031 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 43

Conread position: 8-365
Cow position: chr28:7757926-7758283 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 43

Conread position: 8-365
Cow position: chr28:11334047-11333690 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 228
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 42

Conread position: 8-375
Cow position: chr28:9252775-9253140 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 223
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 165, 120

Conread position: 8-375
Cow position: chr28:9252941-9253308 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 131, 117

Conread position: 9-285
Cow position: chr28:9298908-9299182 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 131, 87

Conread position: 10-302
Cow position: chr28:9290344-9290634 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 31

Conread position: 11-339
Cow position: chr28:9299230-9299558 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 41

Conread position: 11-365
Cow position: chr28:7810357-7810702 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 227
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 122

Conread position: 12-364
Cow position: chr28:7758334-7758686 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 207
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 134, 119

Conread position: 14-348
Cow position: chr28:34695840-34696174 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 212
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 111

Conread position: 16-392
Cow position: chr28:9253033-9253408 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 190, 203

Conread position: 17-380
Cow position: chr28:7757431-7757794 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 72, 83

Conread position: 21-339
Cow position: chr28:7757351-7757669 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 203
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 28, 36

Conread position: 22-270
Cow position: chr28:7810284-7810532 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 75

Conread position: 22-285
Cow position: chr28:7810527-7810790 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 56

Conread position: 22-356
Cow position: chr28:9290272-9290604 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 29

Conread position: 22-368
Cow position: chr28:7757190-7757530 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 217
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 195, 109

Conread position: 22-368
Cow position: chr28:7757856-7758202 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 19, 29

Conread position: 25-375
Cow position: chr28:9298590-9298938 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 28

Conread position: 77-365
Cow position: chr28:34696239-34696527 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 240, 235

Conread position: 106-360
Cow position: chr28:7810284-7810538 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 114

Conread position: 149-365
Cow position: chr28:7758387-7758603 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.