Cow genome map


           Conread name:
           rcsk08_h15.y1
        

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               1-339
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               88, 101
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               140, 124
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               151, 129
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               145, 128
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 227
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               154, 130
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               126, 140
               

               Conread position:
               2-332
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               153, 132
               

               Conread position:
               7-291
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               226, 221
               

               Conread position:
               7-330
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               226, 219
               

               Conread position:
               7-365
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               124, 43
               

               Conread position:
               7-365
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               108, 114
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-330
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-339
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               276, 254
               

               Conread position:
               8-341
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               225, 220
               

               Conread position:
               8-342
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               8-355
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 213
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               119, 132
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 114
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 213
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               226, 204
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               124, 111
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               226, 219
               

               Conread position:
               9-292
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               79, 88
               

               Conread position:
               9-360
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               35, 42
               

               Conread position:
               10-365
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               222, 201
               

               Conread position:
               11-339
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               144, 119
               

               Conread position:
               11-341
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               298, 287
               

               Conread position:
               11-356
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               139, 45
               

               Conread position:
               11-368
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               275, 128
               

               Conread position:
               11-368
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               12-357
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               329, 341
               

               Conread position:
               16-356
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 212
               

               Conread position:
               23-310
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               23-375
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               26-375
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               30, 24
               

               Conread position:
               30-375
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               50-368
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               64-365
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               144-375
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 35
               
Show alignments to all cow chromosomes.