Cow genome map


           Conread name:
           rcsk08_h15.y1
        

               Conread position:
               1-342
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               1-354
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               42, 50
               

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               148, 126
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               139, 124
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 124
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               231, 216
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               230, 219
               

               Conread position:
               2-356
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               2-362
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               2-365
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               209, 232
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-357
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 127
               

               Conread position:
               8-340
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               133, 121
               

               Conread position:
               8-348
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 120
               

               Conread position:
               8-356
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               301, 290
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               117, 140
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               201, 211
               

               Conread position:
               8-357
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               222, 198
               

               Conread position:
               8-364
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               224, 218
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 232
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               132, 9
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               139, 123
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               132, 123
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 133
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               8-375
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-378
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               9-360
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-375
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               77, 114
               

               Conread position:
               12-342
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               98, 112
               

               Conread position:
               12-348
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               118, 132
               

               Conread position:
               12-355
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               129, 116
               

               Conread position:
               12-356
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 46
               

               Conread position:
               13-375
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               219, 200
               

               Conread position:
               16-355
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-375
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               238
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               54, 77
               

               Conread position:
               17-365
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               240, 253
               

               Conread position:
               22-354
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               139, 134
               

               Conread position:
               24-365
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 117
               

               Conread position:
               79-357
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               153, 14
               
Show alignments to all cow chromosomes.