Cow genome map
| Conread name: | rcsk08_h15.y1 |
| Conread position: | 1-342 |
| Cow position: | chr8:46816632-46816973 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 34, 50 |
| Conread position: | 1-354 |
| Cow position: | chr8:46816128-46816481 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 1-356 |
| Cow position: | chr8:46816968-46817323 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 148, 126 |
| Conread position: | 1-357 |
| Cow position: | chr8:55581325-55581681 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 139, 124 |
| Conread position: | 1-368 |
| Cow position: | chr8:48407379-48407012 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-375 |
| Cow position: | chr8:46816548-46816922 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 124 |
| Conread position: | 1-375 |
| Cow position: | chr8:55581157-55581531 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 231, 216 |
| Conread position: | 2-355 |
| Cow position: | chr8:48407462-48407109 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 230, 219 |
| Conread position: | 2-356 |
| Cow position: | chr8:48406958-48406604 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 2-362 |
| Cow position: | chr8:48407126-48406765 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 2-365 |
| Cow position: | chr8:45201354-45201717 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 209, 232 |
| Conread position: | 7-357 |
| Cow position: | chr8:45201443-45201793 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-357 |
| Cow position: | chr8:55580995-55581345 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 127 |
| Conread position: | 8-340 |
| Cow position: | chr8:46817059-46817391 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 133, 121 |
| Conread position: | 8-348 |
| Cow position: | chr8:46816387-46816727 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 120 |
| Conread position: | 8-356 |
| Cow position: | chr8:55581080-55581428 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 301, 290 |
| Conread position: | 8-357 |
| Cow position: | chr8:45201108-45201457 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 117, 140 |
| Conread position: | 8-357 |
| Cow position: | chr8:45201192-45201541 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 201, 211 |
| Conread position: | 8-357 |
| Cow position: | chr8:55581248-55581597 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 222, 198 |
| Conread position: | 8-364 |
| Cow position: | chr8:48407540-48407184 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-365 |
| Cow position: | chr8:46816219-46816576 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 224, 218 |
| Conread position: | 8-365 |
| Cow position: | chr8:46816723-46817080 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 232 |
| Conread position: | 8-365 |
| Cow position: | chr8:48407036-48406679 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-368 |
| Cow position: | chr8:45201277-45201636 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 132, 9 |
| Conread position: | 8-368 |
| Cow position: | chr8:45201528-45201888 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 139, 123 |
| Conread position: | 8-368 |
| Cow position: | chr8:45201612-45201972 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 132, 123 |
| Conread position: | 8-368 |
| Cow position: | chr8:46816471-46816831 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 133 |
| Conread position: | 8-375 |
| Cow position: | chr8:46816891-46817258 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 8-375 |
| Cow position: | chr8:48407204-48406837 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-378 |
| Cow position: | chr8:46816304-46816673 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 16 |
| Conread position: | 9-360 |
| Cow position: | chr8:48406699-48406348 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-375 |
| Cow position: | chr8:46815883-46816250 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 77, 114 |
| Conread position: | 12-342 |
| Cow position: | chr8:48406864-48406534 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 98, 112 |
| Conread position: | 12-348 |
| Cow position: | chr8:48407284-48406948 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 118, 132 |
| Conread position: | 12-355 |
| Cow position: | chr8:46815971-46816314 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 129, 116 |
| Conread position: | 12-356 |
| Cow position: | chr8:48407620-48407276 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 13-375 |
| Cow position: | chr8:55580833-55581195 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 219, 200 |
| Conread position: | 16-355 |
| Cow position: | chr8:55580920-55581259 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-375 |
| Cow position: | chr8:45200948-45201307 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 54, 77 |
| Conread position: | 17-365 |
| Cow position: | chr8:46816060-46816408 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 240, 253 |
| Conread position: | 22-354 |
| Cow position: | chr8:46816821-46817153 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 139, 134 |
| Conread position: | 24-365 |
| Cow position: | chr8:45201040-45201381 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 105, 117 |
| Conread position: | 79-357 |
| Cow position: | chr8:48407635-48407359 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 153, 14 |
Show alignments to all cow chromosomes.