Cow genome map
| Conread name: | rcsk08_h15.y1 |
| Conread position: | 1-348 |
| Cow position: | chrX:29045009-29044662 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 128 |
| Conread position: | 1-357 |
| Cow position: | chrX:25325252-25324896 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 233, 226 |
| Conread position: | 1-365 |
| Cow position: | chrX:25309973-25310337 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 128, 148 |
| Conread position: | 1-365 |
| Cow position: | chrX:25325168-25324804 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 58, 65 |
| Conread position: | 1-368 |
| Cow position: | chrX:25325420-25325053 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 132 |
| Conread position: | 7-348 |
| Cow position: | chrX:25324658-25324317 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 228, 214 |
| Conread position: | 7-348 |
| Cow position: | chrX:25324994-25324653 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 134, 120 |
| Conread position: | 7-355 |
| Cow position: | chrX:25309895-25310243 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 124, 133 |
| Conread position: | 8-288 |
| Cow position: | chrX:29045653-29045373 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 119 |
| Conread position: | 8-339 |
| Cow position: | chrX:25309812-25310143 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 133, 113 |
| Conread position: | 8-356 |
| Cow position: | chrX:25310148-25310496 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 119, 127 |
| Conread position: | 8-360 |
| Cow position: | chrX:29045086-29044733 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 125 |
| Conread position: | 8-361 |
| Cow position: | chrX:25310232-25310584 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 8-375 |
| Cow position: | chrX:25310064-25310431 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 121, 132 |
| Conread position: | 8-375 |
| Cow position: | chrX:25325581-25325214 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 226, 202 |
| Conread position: | 8-380 |
| Cow position: | chrX:25325497-25325125 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 219 |
| Conread position: | 10-342 |
| Cow position: | chrX:29045252-29044920 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 224, 218 |
| Conread position: | 10-368 |
| Cow position: | chrX:25325747-25325389 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 207, 203 |
| Conread position: | 11-347 |
| Cow position: | chrX:29045734-29045399 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 129, 120 |
| Conread position: | 11-365 |
| Cow position: | chrX:29045167-29044813 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 129, 120 |
| Conread position: | 11-375 |
| Cow position: | chrX:25324822-25324458 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 284 |
| Conread position: | 12-341 |
| Cow position: | chrX:25324567-25324240 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 15-365 |
| Cow position: | chrX:29045331-29044981 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 220, 206 |
| Conread position: | 17-339 |
| Cow position: | chrX:25309737-25310059 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 217, 203 |
| Conread position: | 17-355 |
| Cow position: | chrX:25325320-25324982 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-365 |
| Cow position: | chrX:25324727-25324384 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 119, 106 |
| Conread position: | 24-378 |
| Cow position: | chrX:25325817-25325463 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 26-348 |
| Cow position: | chrX:13826924-13826602 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 115, 92 |
| Conread position: | 60-356 |
| Cow position: | chrX:25309696-25309992 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 64-339 |
| Cow position: | chrX:25325609-25325334 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 142, 153 |
| Conread position: | 67-368 |
| Cow position: | chrX:29045762-29045461 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-348 |
| Cow position: | chrX:29045332-29045082 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 116-375 |
| Cow position: | chrX:25309669-25309927 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 225, 13 |
Show alignments to all cow chromosomes.