Non-Coding RNA Search

Cow genome map


           Conread name:
           rcsk15_m20.y1
        

               Conread position:
               79-313
               

               Cow position:
               chr11:48233059-48232815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               95, 74
               

               Conread position:
               82-309
               

               Cow position:
               chr11:5176164-5176388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               5, 20
               

               Conread position:
               86-314
               

               Cow position:
               chr11:49396312-49396539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               86-316
               

               Cow position:
               chr11:19591783-19592010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               87-335
               

               Cow position:
               chr11:28675288-28675042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               88-271
               

               Cow position:
               chr11:17369737-17369560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               88-287
               

               Cow position:
               chr11:77227741-77227552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               129, 95
               

               Conread position:
               89-324
               

               Cow position:
               chr11:69417619-69417380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 206
               

               Conread position:
               90-212
               

               Cow position:
               chr11:72568256-72568379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               90-301
               

               Cow position:
               chr11:80370323-80370112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               206, 167
               

               Conread position:
               90-333
               

               Cow position:
               chr11:68909642-68909878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               14, 191
               

               Conread position:
               91-312
               

               Cow position:
               chr11:6395963-6395744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               91-313
               

               Cow position:
               chr11:25604159-25603935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               113, 25
               

               Conread position:
               91-333
               

               Cow position:
               chr11:866489-866260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               91-337
               

               Cow position:
               chr11:3715030-3714789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               92-313
               

               Cow position:
               chr11:26117531-26117734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               93-278
               

               Cow position:
               chr11:36847375-36847190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               93-335
               

               Cow position:
               chr11:32254010-32254251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               94-315
               

               Cow position:
               chr11:86895576-86895362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               94-328
               

               Cow position:
               chr11:65762377-65762618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               94-337
               

               Cow position:
               chr11:54741873-54742117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               95-333
               

               Cow position:
               chr11:18447295-18447524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               96-261
               

               Cow position:
               chr11:80695038-80695203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-275
               

               Cow position:
               chr11:63491222-63491043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-304
               

               Cow position:
               chr11:63407898-63407693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               96-333
               

               Cow position:
               chr11:9237646-9237879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               96-338
               

               Cow position:
               chr11:5328989-5328743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 150
               

               Conread position:
               98-233
               

               Cow position:
               chr11:36180644-36180514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               98-271
               

               Cow position:
               chr11:15881221-15881391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               98-279
               

               Cow position:
               chr11:32108487-32108667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               98-279
               

               Cow position:
               chr11:62606619-62606438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-295
               

               Cow position:
               chr11:5559484-5559289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               98-307
               

               Cow position:
               chr11:15526309-15526107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               98-316
               

               Cow position:
               chr11:27502502-27502717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               98-316
               

               Cow position:
               chr11:46329700-46329481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               98-317
               

               Cow position:
               chr11:56115138-56114922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 101
               

               Conread position:
               98-337
               

               Cow position:
               chr11:6245523-6245282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               24, 114
               

               Conread position:
               98-337
               

               Cow position:
               chr11:17859952-17860192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               99, 139
               

               Conread position:
               98-337
               

               Cow position:
               chr11:23271805-23272038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               98-337
               

               Cow position:
               chr11:39250166-39249936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               98-337
               

               Cow position:
               chr11:63435720-63435485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               99-236
               

               Cow position:
               chr11:57874007-57873873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               99-241
               

               Cow position:
               chr11:28850449-28850308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               99-286
               

               Cow position:
               chr11:54872560-54872745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               99-298
               

               Cow position:
               chr11:23278763-23278963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               96, 51
               

               Conread position:
               99-304
               

               Cow position:
               chr11:84228523-84228721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               99-315
               

               Cow position:
               chr11:26535983-26535775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               144, 8
               

               Conread position:
               99-334
               

               Cow position:
               chr11:3896497-3896732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 193
               

               Conread position:
               99-336
               

               Cow position:
               chr11:75285556-75285801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               99-337
               

               Cow position:
               chr11:25791492-25791730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               23, 213
               

               Conread position:
               100-305
               

               Cow position:
               chr11:63998891-63999096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-316
               

               Cow position:
               chr11:18119701-18119486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               100-324
               

               Cow position:
               chr11:22676310-22676092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               101-302
               

               Cow position:
               chr11:48544634-48544436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               101-303
               

               Cow position:
               chr11:57936998-57937195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               101-318
               

               Cow position:
               chr11:75557720-75557956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               101-319
               

               Cow position:
               chr11:9221523-9221750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               101-324
               

               Cow position:
               chr11:31875290-31875069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               101-324
               

               Cow position:
               chr11:75479825-75480043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               101-336
               

               Cow position:
               chr11:68112062-68112297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               210, 19
               

               Conread position:
               101-336
               

               Cow position:
               chr11:76369332-76369558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               139, 53
               

               Conread position:
               101-337
               

               Cow position:
               chr11:8988028-8988266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               101-337
               

               Cow position:
               chr11:53778820-53778580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               102-276
               

               Cow position:
               chr11:56348634-56348806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               102-307
               

               Cow position:
               chr11:55398955-55399158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               102-320
               

               Cow position:
               chr11:70517381-70517613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               102-336
               

               Cow position:
               chr11:7500946-7500707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               197, 57
               

               Conread position:
               103-231
               

               Cow position:
               chr11:60488478-60488349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               91, 117
               

               Conread position:
               103-237
               

               Cow position:
               chr11:35801713-35801579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               103-255
               

               Cow position:
               chr11:53460895-53460742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               18, 109
               

               Conread position:
               103-271
               

               Cow position:
               chr11:30986832-30986668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               103-281
               

               Cow position:
               chr11:81175795-81175616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 103
               

               Conread position:
               103-282
               

               Cow position:
               chr11:39014-38830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               103-288
               

               Cow position:
               chr11:26442307-26442492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               103-288
               

               Cow position:
               chr11:69676159-69676340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               123, 56
               

               Conread position:
               103-299
               

               Cow position:
               chr11:44620150-44619956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               103-304
               

               Cow position:
               chr11:79666066-79666265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               103-307
               

               Cow position:
               chr11:32653489-32653282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               103-315
               

               Cow position:
               chr11:59463444-59463653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               103-316
               

               Cow position:
               chr11:42084477-42084691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               103-316
               

               Cow position:
               chr11:84385442-84385652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               103-329
               

               Cow position:
               chr11:20205662-20205880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               103-337
               

               Cow position:
               chr11:78380873-78381097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               104-209
               

               Cow position:
               chr11:46978207-46978315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               104-219
               

               Cow position:
               chr11:55830032-55830147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               104-222
               

               Cow position:
               chr11:43736912-43737030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               104-258
               

               Cow position:
               chr11:15744889-15745043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               37, 108
               

               Conread position:
               104-260
               

               Cow position:
               chr11:9087922-9088076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 94
               

               Conread position:
               104-261
               

               Cow position:
               chr11:41133885-41134040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               92, 97
               

               Conread position:
               104-264
               

               Cow position:
               chr11:1265347-1265507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               104-268
               

               Cow position:
               chr11:49192259-49192425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 112
               

               Conread position:
               104-271
               

               Cow position:
               chr11:44016441-44016273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               104-274
               

               Cow position:
               chr11:42183234-42183058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               104-275
               

               Cow position:
               chr11:25614608-25614788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               104-276
               

               Cow position:
               chr11:63484136-63483966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               104-280
               

               Cow position:
               chr11:67208444-67208273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               104-281
               

               Cow position:
               chr11:50629465-50629296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               104-286
               

               Cow position:
               chr11:53651835-53651655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               104-288
               

               Cow position:
               chr11:71303774-71303591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               104-295
               

               Cow position:
               chr11:46314208-46314016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               96, 88
               

               Conread position:
               104-297
               

               Cow position:
               chr11:6594034-6594236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               104-298
               

               Cow position:
               chr11:6353003-6352811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               110, 101
               

               Conread position:
               104-299
               

               Cow position:
               chr11:42206611-42206423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               104-299
               

               Cow position:
               chr11:80007867-80008066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 124
               

               Conread position:
               104-305
               

               Cow position:
               chr11:1076599-1076388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 43
               

               Conread position:
               104-305
               

               Cow position:
               chr11:21590583-21590382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               96, 174
               

               Conread position:
               104-305
               

               Cow position:
               chr11:32353791-32353990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 122
               

               Conread position:
               104-305
               

               Cow position:
               chr11:33368266-33368078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               104-305
               

               Cow position:
               chr11:33971605-33971808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               104-305
               

               Cow position:
               chr11:35980946-35981146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               104-313
               

               Cow position:
               chr11:31901367-31901173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               104-314
               

               Cow position:
               chr11:20117272-20117060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               104-315
               

               Cow position:
               chr11:5417084-5416870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               104-315
               

               Cow position:
               chr11:21124414-21124621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               104-316
               

               Cow position:
               chr11:2788590-2788378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               104-316
               

               Cow position:
               chr11:12555107-12555321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               104-316
               

               Cow position:
               chr11:29308778-29308565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               104-316
               

               Cow position:
               chr11:37099977-37100184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               104-317
               

               Cow position:
               chr11:44032201-44031995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               104-317
               

               Cow position:
               chr11:74316901-74316693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               104-319
               

               Cow position:
               chr11:42016444-42016657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               104-324
               

               Cow position:
               chr11:5217265-5217491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               81, 99
               

               Conread position:
               104-324
               

               Cow position:
               chr11:7314954-7315172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               104-324
               

               Cow position:
               chr11:19487281-19487504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               104-324
               

               Cow position:
               chr11:23251404-23251614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               158, 47
               

               Conread position:
               104-324
               

               Cow position:
               chr11:31537253-31537463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               99, 119
               

               Conread position:
               104-324
               

               Cow position:
               chr11:32777868-32777656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               89, 26
               

               Conread position:
               104-324
               

               Cow position:
               chr11:56288740-56288522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 101
               

               Conread position:
               104-324
               

               Cow position:
               chr11:61675659-61675445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               104-324
               

               Cow position:
               chr11:63165456-63165670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               104-324
               

               Cow position:
               chr11:70458240-70458018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 116
               

               Conread position:
               104-324
               

               Cow position:
               chr11:73573844-73573622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               104-324
               

               Cow position:
               chr11:77745052-77745275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               104-333
               

               Cow position:
               chr11:2327884-2327653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               104-335
               

               Cow position:
               chr11:65826558-65826785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 45
               

               Conread position:
               104-336
               

               Cow position:
               chr11:5188133-5187902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               196, 113
               

               Conread position:
               104-336
               

               Cow position:
               chr11:28367906-28367670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 123
               

               Conread position:
               104-336
               

               Cow position:
               chr11:35347556-35347788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               104-336
               

               Cow position:
               chr11:36136303-36136064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               100, 145
               

               Conread position:
               104-336
               

               Cow position:
               chr11:37989428-37989655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               104-336
               

               Cow position:
               chr11:42884590-42884821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               104-336
               

               Cow position:
               chr11:53773878-53773646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               104-336
               

               Cow position:
               chr11:64077307-64077541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               194, 121
               

               Conread position:
               104-337
               

               Cow position:
               chr11:10956679-10956908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               79, 88
               

               Conread position:
               104-337
               

               Cow position:
               chr11:19247009-19247235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               104-337
               

               Cow position:
               chr11:42067059-42066825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               178, 99
               

               Conread position:
               104-337
               

               Cow position:
               chr11:63065847-63065619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               131, 46
               

               Conread position:
               104-337
               

               Cow position:
               chr11:68913338-68913104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               104-337
               

               Cow position:
               chr11:71934752-71934991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               104-337
               

               Cow position:
               chr11:79728477-79728706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               105-302
               

               Cow position:
               chr11:30322300-30322494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               105-317
               

               Cow position:
               chr11:48315205-48315413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               105-335
               

               Cow position:
               chr11:62812758-62812984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               105-337
               

               Cow position:
               chr11:3740158-3739917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               105-337
               

               Cow position:
               chr11:29659755-29659523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               26, 45
               

               Conread position:
               105-337
               

               Cow position:
               chr11:53817049-53816821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 194
               

               Conread position:
               105-337
               

               Cow position:
               chr11:68883914-68883682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               106-305
               

               Cow position:
               chr11:63498937-63499131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 83
               

               Conread position:
               106-324
               

               Cow position:
               chr11:5433459-5433245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               194, 88
               

               Conread position:
               107-324
               

               Cow position:
               chr11:27907962-27907757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               107-337
               

               Cow position:
               chr11:57608273-57608492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               108-281
               

               Cow position:
               chr11:71192164-71191990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               108-296
               

               Cow position:
               chr11:42498035-42497849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               108-316
               

               Cow position:
               chr11:33409075-33409277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               108-324
               

               Cow position:
               chr11:31417615-31417398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               108-324
               

               Cow position:
               chr11:41215924-41215709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               108-324
               

               Cow position:
               chr11:47310793-47311007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               109-261
               

               Cow position:
               chr11:25751058-25750916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               109-278
               

               Cow position:
               chr11:41141075-41140909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               109-298
               

               Cow position:
               chr11:81065860-81066047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               109-302
               

               Cow position:
               chr11:76248236-76248048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               109-305
               

               Cow position:
               chr11:64103861-64104051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               109-313
               

               Cow position:
               chr11:68660424-68660623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               109-316
               

               Cow position:
               chr11:21830021-21830225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               109-324
               

               Cow position:
               chr11:51687546-51687754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               197, 44
               

               Conread position:
               109-327
               

               Cow position:
               chr11:67615062-67615272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               109-336
               

               Cow position:
               chr11:81167841-81168062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               109-337
               

               Cow position:
               chr11:8544826-8545050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               109-337
               

               Cow position:
               chr11:64029077-64029299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               110-245
               

               Cow position:
               chr11:43594239-43594373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               110-257
               

               Cow position:
               chr11:32585010-32584858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               110-277
               

               Cow position:
               chr11:53486971-53487130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 87
               

               Conread position:
               110-279
               

               Cow position:
               chr11:83028181-83028015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               81, 53
               

               Conread position:
               110-280
               

               Cow position:
               chr11:4621246-4621410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               110-298
               

               Cow position:
               chr11:1932159-1931964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               110-303
               

               Cow position:
               chr11:2874591-2874395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               110-308
               

               Cow position:
               chr11:36917576-36917784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               73, 138
               

               Conread position:
               110-316
               

               Cow position:
               chr11:81041773-81041985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               32, 146
               

               Conread position:
               110-319
               

               Cow position:
               chr11:46245670-46245883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               110-324
               

               Cow position:
               chr11:5218974-5219183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 86
               

               Conread position:
               110-327
               

               Cow position:
               chr11:30894814-30895030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               110-334
               

               Cow position:
               chr11:42835764-42835990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               190, 43
               

               Conread position:
               110-336
               

               Cow position:
               chr11:5961496-5961268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               110-336
               

               Cow position:
               chr11:62964683-62964454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               105, 144
               

               Conread position:
               110-336
               

               Cow position:
               chr11:76890230-76890010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               110-337
               

               Cow position:
               chr11:29677396-29677166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               189, 95
               

               Conread position:
               110-337
               

               Cow position:
               chr11:67345470-67345690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 149
               

               Conread position:
               110-339
               

               Cow position:
               chr11:23407649-23407426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               128, 88
               

               Conread position:
               111-261
               

               Cow position:
               chr11:2830844-2830696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               111-264
               

               Cow position:
               chr11:24551579-24551427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               111, 143
               

               Conread position:
               111-288
               

               Cow position:
               chr11:64607058-64607244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               92, 172
               

               Conread position:
               111-289
               

               Cow position:
               chr11:37042163-37041983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               111-298
               

               Cow position:
               chr11:33374154-33373968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               111-299
               

               Cow position:
               chr11:41278375-41278187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-315
               

               Cow position:
               chr11:20234874-20234670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-319
               

               Cow position:
               chr11:62004282-62004490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               193, 30
               

               Conread position:
               111-322
               

               Cow position:
               chr11:41980015-41980224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               111-328
               

               Cow position:
               chr11:5201458-5201679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               72, 36
               

               Conread position:
               111-336
               

               Cow position:
               chr11:2639455-2639692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               111-337
               

               Cow position:
               chr11:13592928-13592699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               111-337
               

               Cow position:
               chr11:15369577-15369351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-337
               

               Cow position:
               chr11:50472506-50472281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               112-203
               

               Cow position:
               chr11:50197325-50197415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               112-256
               

               Cow position:
               chr11:8474565-8474421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-261
               

               Cow position:
               chr11:35922012-35922158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               112-271
               

               Cow position:
               chr11:33271616-33271460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               112-280
               

               Cow position:
               chr11:30857222-30857058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               117, 69
               

               Conread position:
               112-298
               

               Cow position:
               chr11:42065839-42065652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               112-305
               

               Cow position:
               chr11:5486203-5486009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               112-305
               

               Cow position:
               chr11:6399877-6400068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               101, 139
               

               Conread position:
               112-305
               

               Cow position:
               chr11:65058425-65058617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               112-307
               

               Cow position:
               chr11:48660117-48659928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               112-313
               

               Cow position:
               chr11:12080030-12079824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               112-315
               

               Cow position:
               chr11:1485673-1485875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               172, 85
               

               Conread position:
               112-316
               

               Cow position:
               chr11:4436521-4436304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               112-323
               

               Cow position:
               chr11:4052055-4052258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 96
               

               Conread position:
               112-324
               

               Cow position:
               chr11:30721289-30721075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               112-324
               

               Cow position:
               chr11:34644844-34644632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               112-325
               

               Cow position:
               chr11:19891025-19890818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 71
               

               Conread position:
               112-336
               

               Cow position:
               chr11:36194482-36194259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               112-336
               

               Cow position:
               chr11:46747672-46747896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-337
               

               Cow position:
               chr11:10095530-10095307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               112-337
               

               Cow position:
               chr11:13863913-13864141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               112-337
               

               Cow position:
               chr11:38236432-38236215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               112-337
               

               Cow position:
               chr11:62230375-62230144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               112-340
               

               Cow position:
               chr11:57503667-57503443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               113-261
               

               Cow position:
               chr11:26823299-26823149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               113-261
               

               Cow position:
               chr11:38656996-38657144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-305
               

               Cow position:
               chr11:6423212-6423403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               136, 89
               

               Conread position:
               113-305
               

               Cow position:
               chr11:32126802-32126607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               74, 102
               

               Conread position:
               113-316
               

               Cow position:
               chr11:47314238-47314447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               79, 8
               

               Conread position:
               113-317
               

               Cow position:
               chr11:87171890-87172093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               113-322
               

               Cow position:
               chr11:30172486-30172288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               113-323
               

               Cow position:
               chr11:25783902-25783690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               113-335
               

               Cow position:
               chr11:21886016-21885799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               114-230
               

               Cow position:
               chr11:21637415-21637531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               114-267
               

               Cow position:
               chr11:23278968-23279125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               114-288
               

               Cow position:
               chr11:68570196-68570368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               114-288
               

               Cow position:
               chr11:74839788-74839623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               114-316
               

               Cow position:
               chr11:30708690-30708491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               125, 116
               

               Conread position:
               114-316
               

               Cow position:
               chr11:40792508-40792720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               114-323
               

               Cow position:
               chr11:17638333-17638557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               114-335
               

               Cow position:
               chr11:62620562-62620342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               6, 71
               

               Conread position:
               114-337
               

               Cow position:
               chr11:15772528-15772748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               114-337
               

               Cow position:
               chr11:53510309-53510536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               5, 175
               

               Conread position:
               114-339
               

               Cow position:
               chr11:15382310-15382541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               114-340
               

               Cow position:
               chr11:66939406-66939632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               115-278
               

               Cow position:
               chr11:44176777-44176618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               138
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               115-305
               

               Cow position:
               chr11:1159996-1159808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               115-336
               

               Cow position:
               chr11:40395621-40395403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 71
               

               Conread position:
               115-336
               

               Cow position:
               chr11:45742554-45742342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               115-336
               

               Cow position:
               chr11:64009910-64009684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               116-280
               

               Cow position:
               chr11:73638038-73637875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               116-281
               

               Cow position:
               chr11:63475488-63475653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               116-305
               

               Cow position:
               chr11:49210634-49210826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 106
               

               Conread position:
               116-333
               

               Cow position:
               chr11:258990-259204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               116-337
               

               Cow position:
               chr11:27913469-27913248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               116-337
               

               Cow position:
               chr11:58173817-58173589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               117-220
               

               Cow position:
               chr11:41295041-41295143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               117-221
               

               Cow position:
               chr11:71481842-71481946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-223
               

               Cow position:
               chr11:30111794-30111682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               117-244
               

               Cow position:
               chr11:70273643-70273518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               117-257
               

               Cow position:
               chr11:69035342-69035202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-258
               

               Cow position:
               chr11:53888467-53888608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-261
               

               Cow position:
               chr11:68592201-68592057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-263
               

               Cow position:
               chr11:4390085-4389939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-264
               

               Cow position:
               chr11:32817634-32817780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               117-270
               

               Cow position:
               chr11:6429570-6429727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               117-271
               

               Cow position:
               chr11:51683398-51683245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               133
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               117-279
               

               Cow position:
               chr11:46010077-46010232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               117-279
               

               Cow position:
               chr11:82732968-82733128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               117-280
               

               Cow position:
               chr11:63695656-63695825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               117-280
               

               Cow position:
               chr11:80923144-80923303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               117-280
               

               Cow position:
               chr11:86664599-86664761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               117-281
               

               Cow position:
               chr11:17552897-17553061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               85, 111
               

               Conread position:
               117-281
               

               Cow position:
               chr11:65495162-65495320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               117-281
               

               Cow position:
               chr11:69421523-69421693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               72, 147
               

               Conread position:
               117-286
               

               Cow position:
               chr11:15591298-15591460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               117-289
               

               Cow position:
               chr11:35544268-35544096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-289
               

               Cow position:
               chr11:37565051-37564885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               117-291
               

               Cow position:
               chr11:42786500-42786679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               87, 131
               

               Conread position:
               117-296
               

               Cow position:
               chr11:74152567-74152750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               117-297
               

               Cow position:
               chr11:68829804-68829623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               117-298
               

               Cow position:
               chr11:30192360-30192181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               117-298
               

               Cow position:
               chr11:38223611-38223786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               173, 76
               

               Conread position:
               117-299
               

               Cow position:
               chr11:36092737-36092915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               154, 53
               

               Conread position:
               117-299
               

               Cow position:
               chr11:58186054-58185884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               117-299
               

               Cow position:
               chr11:70600645-70600827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-299
               

               Cow position:
               chr11:85186346-85186526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               117-302
               

               Cow position:
               chr11:35153638-35153825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               117-302
               

               Cow position:
               chr11:36182873-36182691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               178, 44
               

               Conread position:
               117-305
               

               Cow position:
               chr11:6006491-6006308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               117-305
               

               Cow position:
               chr11:9279614-9279428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 90
               

               Conread position:
               117-305
               

               Cow position:
               chr11:19657033-19657218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               117-305
               

               Cow position:
               chr11:29482259-29482440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               117-305
               

               Cow position:
               chr11:42064042-42064229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               117-307
               

               Cow position:
               chr11:36300402-36300584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               117-308
               

               Cow position:
               chr11:42155408-42155217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               117-310
               

               Cow position:
               chr11:7427752-7427948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               113, 181
               

               Conread position:
               117-310
               

               Cow position:
               chr11:34778261-34778451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               117-312
               

               Cow position:
               chr11:3597301-3597106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-313
               

               Cow position:
               chr11:1980083-1980280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               117-313
               

               Cow position:
               chr11:36521062-36520862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               144, 88
               

               Conread position:
               117-313
               

               Cow position:
               chr11:60296920-60296718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               71, 169
               

               Conread position:
               117-313
               

               Cow position:
               chr11:71345133-71345336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               117-314
               

               Cow position:
               chr11:58048513-58048318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               117-315
               

               Cow position:
               chr11:42291658-42291854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               192, 94
               

               Conread position:
               117-315
               

               Cow position:
               chr11:48650168-48649958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               117-315
               

               Cow position:
               chr11:73983808-73984018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               117-315
               

               Cow position:
               chr11:77241884-77241692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               117-316
               

               Cow position:
               chr11:32260713-32260519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               54, 123
               

               Conread position:
               117-316
               

               Cow position:
               chr11:35536757-35536572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               117-316
               

               Cow position:
               chr11:38334703-38334508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               117-316
               

               Cow position:
               chr11:58594204-58594403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-316
               

               Cow position:
               chr11:66099675-66099878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               66, 130
               

               Conread position:
               117-316
               

               Cow position:
               chr11:70978553-70978749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               117-316
               

               Cow position:
               chr11:77208269-77208061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 146
               

               Conread position:
               117-316
               

               Cow position:
               chr11:85571624-85571821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               117-317
               

               Cow position:
               chr11:31228135-31227946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               117-317
               

               Cow position:
               chr11:52380690-52380888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               117-317
               

               Cow position:
               chr11:80586447-80586258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               117-317
               

               Cow position:
               chr11:83043185-83043379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               117-318
               

               Cow position:
               chr11:79548751-79548954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 88
               

               Conread position:
               117-319
               

               Cow position:
               chr11:10563187-10562990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               131, 76
               

               Conread position:
               117-319
               

               Cow position:
               chr11:15017240-15017038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-319
               

               Cow position:
               chr11:47351517-47351318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               188, 131
               

               Conread position:
               117-319
               

               Cow position:
               chr11:56406856-56406658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               117-321
               

               Cow position:
               chr11:74427861-74427657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-322
               

               Cow position:
               chr11:64101955-64101748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               117-323
               

               Cow position:
               chr11:4151125-4150929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               117-323
               

               Cow position:
               chr11:67537934-67538144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               117-324
               

               Cow position:
               chr11:1932306-1932515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               66, 87
               

               Conread position:
               117-324
               

               Cow position:
               chr11:4207493-4207288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               117-324
               

               Cow position:
               chr11:7560183-7559976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-324
               

               Cow position:
               chr11:35580443-35580237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               65, 83
               

               Conread position:
               117-324
               

               Cow position:
               chr11:35669784-35669975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               117-324
               

               Cow position:
               chr11:43524792-43524585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-324
               

               Cow position:
               chr11:46922705-46922909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               113, 78
               

               Conread position:
               117-324
               

               Cow position:
               chr11:47784962-47784751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               117-324
               

               Cow position:
               chr11:48086100-48085895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               149, 67
               

               Conread position:
               117-324
               

               Cow position:
               chr11:63382015-63382214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               117-324
               

               Cow position:
               chr11:66572310-66572520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               70, 179
               

               Conread position:
               117-324
               

               Cow position:
               chr11:71111080-71110868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               117-324
               

               Cow position:
               chr11:83398089-83397882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               173, 178
               

               Conread position:
               117-325
               

               Cow position:
               chr11:10876461-10876254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               117-326
               

               Cow position:
               chr11:1625040-1625249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 83
               

               Conread position:
               117-328
               

               Cow position:
               chr11:18508846-18509058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               117-328
               

               Cow position:
               chr11:49872705-49872911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               117-328
               

               Cow position:
               chr11:50152631-50152841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               117-331
               

               Cow position:
               chr11:55053045-55052841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               117-333
               

               Cow position:
               chr11:27404889-27405102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               87, 81
               

               Conread position:
               117-333
               

               Cow position:
               chr11:30830441-30830646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               130, 26
               

               Conread position:
               117-333
               

               Cow position:
               chr11:48296207-48296001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               117-333
               

               Cow position:
               chr11:67614743-67614955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               202, 80
               

               Conread position:
               117-334
               

               Cow position:
               chr11:62789309-62789097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               117-335
               

               Cow position:
               chr11:14649129-14649348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               117-335
               

               Cow position:
               chr11:25119754-25119965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               117-335
               

               Cow position:
               chr11:45283109-45282894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               117-336
               

               Cow position:
               chr11:3715421-3715202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 31
               

               Conread position:
               117-336
               

               Cow position:
               chr11:5231465-5231688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               179, 93
               

               Conread position:
               117-336
               

               Cow position:
               chr11:18924929-18924710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-336
               

               Cow position:
               chr11:24438037-24438260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               189, 116
               

               Conread position:
               117-336
               

               Cow position:
               chr11:30165693-30165475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               117-336
               

               Cow position:
               chr11:46427225-46427444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               117-336
               

               Cow position:
               chr11:70756656-70756446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               209, 81
               

               Conread position:
               117-336
               

               Cow position:
               chr11:72443296-72443077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 18
               

               Conread position:
               117-337
               

               Cow position:
               chr11:6233696-6233916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-337
               

               Cow position:
               chr11:9270556-9270761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               117-337
               

               Cow position:
               chr11:13940369-13940154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               96, 55
               

               Conread position:
               117-337
               

               Cow position:
               chr11:17321849-17321611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               117-337
               

               Cow position:
               chr11:17889545-17889767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               117-337
               

               Cow position:
               chr11:17990055-17990273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 129
               

               Conread position:
               117-337
               

               Cow position:
               chr11:35351851-35352075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               66, 193
               

               Conread position:
               117-337
               

               Cow position:
               chr11:37918866-37919082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 127
               

               Conread position:
               117-337
               

               Cow position:
               chr11:41985866-41986082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               117-337
               

               Cow position:
               chr11:45276966-45277185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               87, 161
               

               Conread position:
               117-337
               

               Cow position:
               chr11:49153122-49152913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               117-337
               

               Cow position:
               chr11:55334101-55333873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               117-337
               

               Cow position:
               chr11:61454321-61454550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               61, 52
               

               Conread position:
               117-337
               

               Cow position:
               chr11:66188139-66188353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               117-337
               

               Cow position:
               chr11:70422413-70422628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               75, 28
               

               Conread position:
               117-337
               

               Cow position:
               chr11:83042058-83042292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               117-337
               

               Cow position:
               chr11:84890545-84890753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               117-339
               

               Cow position:
               chr11:29960474-29960260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               117-339
               

               Cow position:
               chr11:67600960-67600746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               127, 83
               

               Conread position:
               117-339
               

               Cow position:
               chr11:72871079-72870860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               111, 36
               

               Conread position:
               117-340
               

               Cow position:
               chr11:34646777-34646550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               118-264
               

               Cow position:
               chr11:42837197-42837052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               118-267
               

               Cow position:
               chr11:12742313-12742457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               118-275
               

               Cow position:
               chr11:36361460-36361617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               118-305
               

               Cow position:
               chr11:57767370-57767186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               118-311
               

               Cow position:
               chr11:47110437-47110242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               70, 178
               

               Conread position:
               118-313
               

               Cow position:
               chr11:35434476-35434676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               64, 168
               

               Conread position:
               118-324
               

               Cow position:
               chr11:4221498-4221295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               133, 117
               

               Conread position:
               118-324
               

               Cow position:
               chr11:53649190-53649395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               118-333
               

               Cow position:
               chr11:40608412-40608626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               118-335
               

               Cow position:
               chr11:38211822-38211611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               118-335
               

               Cow position:
               chr11:39060424-39060636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               118-335
               

               Cow position:
               chr11:62239922-62239707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               207, 58
               

               Conread position:
               118-337
               

               Cow position:
               chr11:21508192-21507966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               118-337
               

               Cow position:
               chr11:29786312-29786535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               118-337
               

               Cow position:
               chr11:62742467-62742679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               118-342
               

               Cow position:
               chr11:63975312-63975086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               118-378
               

               Cow position:
               chr11:68841390-68841122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               119-225
               

               Cow position:
               chr11:22102578-22102684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-240
               

               Cow position:
               chr11:30528783-30528659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               119-252
               

               Cow position:
               chr11:65939682-65939814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               119-280
               

               Cow position:
               chr11:33369332-33369171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-281
               

               Cow position:
               chr11:32800807-32800645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-281
               

               Cow position:
               chr11:35732903-35733064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               119-286
               

               Cow position:
               chr11:78672853-78672685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               119-287
               

               Cow position:
               chr11:63849770-63849938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-288
               

               Cow position:
               chr11:6319951-6320120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-289
               

               Cow position:
               chr11:76896193-76896363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-293
               

               Cow position:
               chr11:26057467-26057643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               119-295
               

               Cow position:
               chr11:3208114-3207935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               119-295
               

               Cow position:
               chr11:35924242-35924066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               135, 50
               

               Conread position:
               119-295
               

               Cow position:
               chr11:62102266-62102442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-297
               

               Cow position:
               chr11:4363737-4363908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               119-298
               

               Cow position:
               chr11:75749645-75749482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               119-299
               

               Cow position:
               chr11:3728666-3728487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               119-299
               

               Cow position:
               chr11:23220540-23220364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               119-299
               

               Cow position:
               chr11:38226423-38226244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               119-299
               

               Cow position:
               chr11:40538729-40538552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               149, 78
               

               Conread position:
               119-300
               

               Cow position:
               chr11:81143364-81143542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               128, 63
               

               Conread position:
               119-303
               

               Cow position:
               chr11:66041452-66041276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               119-307
               

               Cow position:
               chr11:19578842-19579022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               119-309
               

               Cow position:
               chr11:48672894-48672704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-310
               

               Cow position:
               chr11:1485054-1485236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               103, 65
               

               Conread position:
               119-310
               

               Cow position:
               chr11:9836275-9836466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-310
               

               Cow position:
               chr11:64781268-64781077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-311
               

               Cow position:
               chr11:19549656-19549474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               119-311
               

               Cow position:
               chr11:35564690-35564494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 107
               

               Conread position:
               119-312
               

               Cow position:
               chr11:3405006-3405198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               119-312
               

               Cow position:
               chr11:3720435-3720244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               119-312
               

               Cow position:
               chr11:47412022-47411830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               119-312
               

               Cow position:
               chr11:71854102-71854290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               119-313
               

               Cow position:
               chr11:52132641-52132834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               119-314
               

               Cow position:
               chr11:77758581-77758774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               119-315
               

               Cow position:
               chr11:7385614-7385425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               119-315
               

               Cow position:
               chr11:20238856-20238662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               119-315
               

               Cow position:
               chr11:27343452-27343256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-315
               

               Cow position:
               chr11:46784643-46784460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               119-315
               

               Cow position:
               chr11:77017410-77017227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               119-316
               

               Cow position:
               chr11:9699075-9699260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               119-316
               

               Cow position:
               chr11:17517579-17517383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               76, 28
               

               Conread position:
               119-316
               

               Cow position:
               chr11:20194244-20194441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-316
               

               Cow position:
               chr11:29954548-29954356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               119-316
               

               Cow position:
               chr11:39462799-39462608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               119-316
               

               Cow position:
               chr11:41438005-41438202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-316
               

               Cow position:
               chr11:43914473-43914276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-316
               

               Cow position:
               chr11:51846477-51846282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               119-317
               

               Cow position:
               chr11:6857910-6857712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               89, 8
               

               Conread position:
               119-317
               

               Cow position:
               chr11:28078669-28078487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               119-318
               

               Cow position:
               chr11:32055005-32055204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               187, 83
               

               Conread position:
               119-319
               

               Cow position:
               chr11:6094224-6094421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               119-319
               

               Cow position:
               chr11:25968673-25968869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               119-320
               

               Cow position:
               chr11:35182807-35183008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-320
               

               Cow position:
               chr11:55348402-55348201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-322
               

               Cow position:
               chr11:59024173-59024381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               66, 150
               

               Conread position:
               119-322
               

               Cow position:
               chr11:70951047-70950848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               199, 63
               

               Conread position:
               119-323
               

               Cow position:
               chr11:21893969-21894181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 164
               

               Conread position:
               119-323
               

               Cow position:
               chr11:45350330-45350534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-323
               

               Cow position:
               chr11:69168768-69168563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               119-323
               

               Cow position:
               chr11:77238311-77238107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               199, 17
               

               Conread position:
               119-323
               

               Cow position:
               chr11:81138392-81138189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:1067259-1067463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:2084325-2084120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:3908434-3908638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:3920123-3920327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:6642994-6642790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:7458100-7458305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:16315054-16314849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:26143919-26144119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:30764672-30764467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:31024621-31024830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:33002147-33001941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:34968433-34968637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:35212991-35213191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:35665379-35665586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 106
               

               Conread position:
               119-324
               

               Cow position:
               chr11:35924036-35923831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:36914385-36914590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:36940414-36940619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:40459285-40459084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               119-324
               

               Cow position:
               chr11:55972751-55972955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               119-324
               

               Cow position:
               chr11:80893962-80893759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               122, 113
               

               Conread position:
               119-324
               

               Cow position:
               chr11:81300441-81300644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               119-325
               

               Cow position:
               chr11:1952759-1952552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               119-326
               

               Cow position:
               chr11:36058978-36058771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-332
               

               Cow position:
               chr11:59862390-59862176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               119-332
               

               Cow position:
               chr11:66325927-66326141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               119-334
               

               Cow position:
               chr11:35562900-35562686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               119-334
               

               Cow position:
               chr11:75090039-75090253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               199, 32
               

               Conread position:
               119-335
               

               Cow position:
               chr11:8670197-8669976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               119-335
               

               Cow position:
               chr11:37804372-37804588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-335
               

               Cow position:
               chr11:45619530-45619318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               119-336
               

               Cow position:
               chr11:34616441-34616222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               119-336
               

               Cow position:
               chr11:56311420-56311631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               119-337
               

               Cow position:
               chr11:32881325-32881107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-337
               

               Cow position:
               chr11:41213232-41213006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               119-337
               

               Cow position:
               chr11:47837499-47837284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               119-337
               

               Cow position:
               chr11:52690345-52690556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               119-337
               

               Cow position:
               chr11:62811476-62811261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               119-337
               

               Cow position:
               chr11:62889712-62889930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-339
               

               Cow position:
               chr11:8524938-8525151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               177, 75
               

               Conread position:
               120-264
               

               Cow position:
               chr11:8828189-8828042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               120-267
               

               Cow position:
               chr11:70821223-70821078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               112, 91
               

               Conread position:
               120-279
               

               Cow position:
               chr11:43641567-43641408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-288
               

               Cow position:
               chr11:30485836-30485664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               120-288
               

               Cow position:
               chr11:40818454-40818614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               120-297
               

               Cow position:
               chr11:18777414-18777594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               74, 164
               

               Conread position:
               120-302
               

               Cow position:
               chr11:52297044-52297222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               120-305
               

               Cow position:
               chr11:6581013-6580828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-305
               

               Cow position:
               chr11:49149225-49149044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               153, 78
               

               Conread position:
               120-307
               

               Cow position:
               chr11:63485111-63484932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               153
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               120-311
               

               Cow position:
               chr11:17074049-17074229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               120-313
               

               Cow position:
               chr11:4199453-4199259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               80, 124
               

               Conread position:
               120-313
               

               Cow position:
               chr11:43627138-43627331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-313
               

               Cow position:
               chr11:66104214-66104407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 72
               

               Conread position:
               120-315
               

               Cow position:
               chr11:32782695-32782898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               120-316
               

               Cow position:
               chr11:41576694-41576883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               120-316
               

               Cow position:
               chr11:48776134-48776332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               120-316
               

               Cow position:
               chr11:67312964-67312765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               71, 27
               

               Conread position:
               120-316
               

               Cow position:
               chr11:68326683-68326879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-316
               

               Cow position:
               chr11:73940383-73940577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               183, 0
               

               Conread position:
               120-319
               

               Cow position:
               chr11:25620211-25620415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               161, 70
               

               Conread position:
               120-322
               

               Cow position:
               chr11:55744648-55744446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               120-323
               

               Cow position:
               chr11:32595638-32595434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               120-323
               

               Cow position:
               chr11:70206494-70206298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               120-324
               

               Cow position:
               chr11:5294384-5294178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               120-324
               

               Cow position:
               chr11:33348020-33348210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               120-331
               

               Cow position:
               chr11:5075051-5075258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               120-335
               

               Cow position:
               chr11:21421759-21421971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               120-335
               

               Cow position:
               chr11:30209644-30209854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               120-336
               

               Cow position:
               chr11:17721622-17721837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               114, 80
               

               Conread position:
               120-337
               

               Cow position:
               chr11:6202635-6202406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               120-337
               

               Cow position:
               chr11:11125844-11125627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               120-337
               

               Cow position:
               chr11:30638773-30638986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               120-337
               

               Cow position:
               chr11:30808418-30808630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               120-337
               

               Cow position:
               chr11:35724149-35723934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               120-337
               

               Cow position:
               chr11:41313483-41313693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               206, 35
               

               Conread position:
               120-337
               

               Cow position:
               chr11:46746815-46746595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 50
               

               Conread position:
               120-337
               

               Cow position:
               chr11:51729453-51729250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               120-337
               

               Cow position:
               chr11:63919888-63920090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               120-337
               

               Cow position:
               chr11:71492685-71492896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               120-337
               

               Cow position:
               chr11:80412830-80413051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               79, 172
               

               Conread position:
               120-339
               

               Cow position:
               chr11:21843960-21844170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               120-339
               

               Cow position:
               chr11:72375487-72375721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               84, 229
               

               Conread position:
               120-350
               

               Cow position:
               chr11:46999165-46998931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               84, 186
               

               Conread position:
               121-229
               

               Cow position:
               chr11:28092629-28092521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-273
               

               Cow position:
               chr11:18574676-18574828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-297
               

               Cow position:
               chr11:49486967-49486783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 176
               

               Conread position:
               121-298
               

               Cow position:
               chr11:5935939-5936113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               121-307
               

               Cow position:
               chr11:7571798-7571618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               121-313
               

               Cow position:
               chr11:8496211-8496020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               121-315
               

               Cow position:
               chr11:65607513-65607704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 79
               

               Conread position:
               121-316
               

               Cow position:
               chr11:15366800-15366988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               121-316
               

               Cow position:
               chr11:31526058-31525860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               121-316
               

               Cow position:
               chr11:76653199-76653004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-324
               

               Cow position:
               chr11:32710693-32710491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               121-324
               

               Cow position:
               chr11:36977985-36977783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               121-327
               

               Cow position:
               chr11:54428798-54428593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               121-332
               

               Cow position:
               chr11:80564475-80564262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               72, 104
               

               Conread position:
               121-333
               

               Cow position:
               chr11:27248666-27248461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               121-335
               

               Cow position:
               chr11:1380855-1380641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-337
               

               Cow position:
               chr11:13500188-13499981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               121-340
               

               Cow position:
               chr11:4395159-4395379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               97, 154
               

               Conread position:
               121-351
               

               Cow position:
               chr11:78544463-78544234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               220, 0
               

               Conread position:
               122-261
               

               Cow position:
               chr11:86925787-86925921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               122-289
               

               Cow position:
               chr11:72401561-72401721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               122-322
               

               Cow position:
               chr11:81405990-81406189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               143, 89
               

               Conread position:
               122-323
               

               Cow position:
               chr11:17036355-17036551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               198, 73
               

               Conread position:
               122-335
               

               Cow position:
               chr11:61526256-61526033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               62, 164
               

               Conread position:
               122-336
               

               Cow position:
               chr11:71707981-71707780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               212, 34
               

               Conread position:
               122-337
               

               Cow position:
               chr11:43360610-43360813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-337
               

               Cow position:
               chr11:55762033-55761832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               123-316
               

               Cow position:
               chr11:40516939-40517131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               123-324
               

               Cow position:
               chr11:5454518-5454725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               123-337
               

               Cow position:
               chr11:18543345-18543542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               123-339
               

               Cow position:
               chr11:70483675-70483890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               124-305
               

               Cow position:
               chr11:60720279-60720460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               148
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               124-336
               

               Cow position:
               chr11:7874315-7874103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               124-337
               

               Cow position:
               chr11:36920403-36920614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               87, 29
               

               Conread position:
               125-288
               

               Cow position:
               chr11:80296685-80296840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               101, 22
               

               Conread position:
               125-315
               

               Cow position:
               chr11:60486242-60486433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               75, 30
               

               Conread position:
               125-337
               

               Cow position:
               chr11:35109366-35109574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 22
               

               Conread position:
               126-246
               

               Cow position:
               chr11:70824537-70824659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               126-311
               

               Cow position:
               chr11:49207884-49207700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               127-268
               

               Cow position:
               chr11:65436394-65436253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 34
               

               Conread position:
               127-278
               

               Cow position:
               chr11:43008134-43008297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               127-278
               

               Cow position:
               chr11:54128265-54128116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               127-296
               

               Cow position:
               chr11:26343274-26343106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               127-306
               

               Cow position:
               chr11:21173265-21173443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               127-306
               

               Cow position:
               chr11:58102586-58102766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               127-317
               

               Cow position:
               chr11:17083141-17083326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               127-319
               

               Cow position:
               chr11:46884547-46884355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-337
               

               Cow position:
               chr11:13042976-13043182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               127-337
               

               Cow position:
               chr11:77705922-77705722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               127-339
               

               Cow position:
               chr11:48474881-48474665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               128-243
               

               Cow position:
               chr11:67417980-67417866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               128-255
               

               Cow position:
               chr11:58926253-58926117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               128-297
               

               Cow position:
               chr11:5467252-5467085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               128-297
               

               Cow position:
               chr11:30600019-30600188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 70
               

               Conread position:
               128-304
               

               Cow position:
               chr11:64022939-64023103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               128-305
               

               Cow position:
               chr11:2836031-2835854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-312
               

               Cow position:
               chr11:27760689-27760506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               162, 27
               

               Conread position:
               128-312
               

               Cow position:
               chr11:63849089-63849271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               128-316
               

               Cow position:
               chr11:35149573-35149383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               76, 113
               

               Conread position:
               128-316
               

               Cow position:
               chr11:45872139-45872326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               128-317
               

               Cow position:
               chr11:4637004-4637188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               128-323
               

               Cow position:
               chr11:34467733-34467548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               128-323
               

               Cow position:
               chr11:37435819-37436010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               128-333
               

               Cow position:
               chr11:47755209-47755418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               97, 175
               

               Conread position:
               128-334
               

               Cow position:
               chr11:8462176-8461970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               190, 77
               

               Conread position:
               128-335
               

               Cow position:
               chr11:77319583-77319380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               128-336
               

               Cow position:
               chr11:39554018-39554233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               128-336
               

               Cow position:
               chr11:53463113-53462907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               111, 70
               

               Conread position:
               128-336
               

               Cow position:
               chr11:56676096-56675882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 83
               

               Conread position:
               128-337
               

               Cow position:
               chr11:60301806-60301997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               128-337
               

               Cow position:
               chr11:73353896-73354096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               129-257
               

               Cow position:
               chr11:899606-899477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               129-326
               

               Cow position:
               chr11:11994542-11994732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               129-337
               

               Cow position:
               chr11:85723864-85723661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               130-319
               

               Cow position:
               chr11:30728570-30728382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               130-327
               

               Cow position:
               chr11:35363666-35363455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               130-336
               

               Cow position:
               chr11:4674275-4674481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               130-337
               

               Cow position:
               chr11:26632844-26633050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               130-337
               

               Cow position:
               chr11:34144750-34144950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 143
               

               Conread position:
               130-337
               

               Cow position:
               chr11:35926740-35926941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               130-337
               

               Cow position:
               chr11:39854853-39855050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               130-337
               

               Cow position:
               chr11:44017153-44016938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               131-324
               

               Cow position:
               chr11:64409134-64408953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               134-324
               

               Cow position:
               chr11:3780250-3780441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               137-337
               

               Cow position:
               chr11:63202085-63202286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               138-323
               

               Cow position:
               chr11:82289749-82289560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 152
               

               Conread position:
               138-324
               

               Cow position:
               chr11:38670851-38670662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               93, 162
               

               Conread position:
               139-305
               

               Cow position:
               chr11:41281206-41281040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               139-335
               

               Cow position:
               chr11:30370262-30370075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               139-337
               

               Cow position:
               chr11:7924432-7924625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               141-288
               

               Cow position:
               chr11:7651907-7652054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               142-336
               

               Cow position:
               chr11:22319404-22319206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               143-321
               

               Cow position:
               chr11:35140066-35139887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               143-339
               

               Cow position:
               chr11:59903048-59902852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-306
               

               Cow position:
               chr11:81614356-81614519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               144-316
               

               Cow position:
               chr11:18791908-18792083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               144-337
               

               Cow position:
               chr11:87155676-87155484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               146-293
               

               Cow position:
               chr11:55117599-55117452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               146-337
               

               Cow position:
               chr11:34136394-34136207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               147-297
               

               Cow position:
               chr11:17807809-17807958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               147-317
               

               Cow position:
               chr11:31410728-31410894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               153-337
               

               Cow position:
               chr11:4652822-4653009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               154-302
               

               Cow position:
               chr11:59916293-59916146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               154-345
               

               Cow position:
               chr11:62778589-62778400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               15, 140
               

               Conread position:
               155-281
               

               Cow position:
               chr11:37490433-37490557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               155-326
               

               Cow position:
               chr11:34113406-34113238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               135, 46
               

               Conread position:
               155-336
               

               Cow position:
               chr11:71868459-71868639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               173, 23
               

               Conread position:
               155-337
               

               Cow position:
               chr11:36112562-36112387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               159-336
               

               Cow position:
               chr11:18243805-18243976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               160-301
               

               Cow position:
               chr11:61178491-61178357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               161-312
               

               Cow position:
               chr11:38202109-38201958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               162-331
               

               Cow position:
               chr11:33414375-33414206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               163-340
               

               Cow position:
               chr11:2344388-2344211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 39
               

               Conread position:
               164-337
               

               Cow position:
               chr11:45849361-45849536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               168-337
               

               Cow position:
               chr11:53717675-53717843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               170-323
               

               Cow position:
               chr11:83687304-83687456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               174-337
               

               Cow position:
               chr11:76835498-76835661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               177-314
               

               Cow position:
               chr11:37335966-37336102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               181-337
               

               Cow position:
               chr11:56575641-56575800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               92, 46
               

               Conread position:
               182-295
               

               Cow position:
               chr11:75246466-75246354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               182-303
               

               Cow position:
               chr11:37982459-37982580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               182-335
               

               Cow position:
               chr11:5789781-5789935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               182-337
               

               Cow position:
               chr11:61958630-61958780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               183-321
               

               Cow position:
               chr11:29983601-29983737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               185-316
               

               Cow position:
               chr11:62168216-62168346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               185-337
               

               Cow position:
               chr11:62155752-62155602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               186-319
               

               Cow position:
               chr11:72333703-72333570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-311
               

               Cow position:
               chr11:32615850-32615725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               187-337
               

               Cow position:
               chr11:35573378-35573526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               188-337
               

               Cow position:
               chr11:68173645-68173495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               189-316
               

               Cow position:
               chr11:40478741-40478868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               189-337
               

               Cow position:
               chr11:61137063-61137211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               191-337
               

               Cow position:
               chr11:63482321-63482462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               192-337
               

               Cow position:
               chr11:33311086-33310937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               193-324
               

               Cow position:
               chr11:69415491-69415620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               194-335
               

               Cow position:
               chr11:62609711-62609570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               202-313
               

               Cow position:
               chr11:41048453-41048343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               202-316
               

               Cow position:
               chr11:15682881-15682995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               205-328
               

               Cow position:
               chr11:16719341-16719218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               205-335
               

               Cow position:
               chr11:29946818-29946948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	79-313
Cow position:	chr11:48233059-48232815 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	175
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	95, 74
Conread position:	82-309
Cow position:	chr11:5176164-5176388 (view UCSC Genome Browser custom track)
Alignm length:	232
Alignm identity:	174
Alignm E-value:	8e-39
Alignm gaps (pig, cow):	5, 20
Conread position:	86-314
Cow position:	chr11:49396312-49396539 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	167
Alignm E-value:	7e-38
Alignm gaps (pig, cow):	36, 115
Conread position:	86-316
Cow position:	chr11:19591783-19592010 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	170
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	61, 0
Conread position:	87-335
Cow position:	chr11:28675288-28675042 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	162
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	17, 0
Conread position:	88-271
Cow position:	chr11:17369737-17369560 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	139
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	106, 0
Conread position:	88-287
Cow position:	chr11:77227741-77227552 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	144
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	129, 95
Conread position:	89-324
Cow position:	chr11:69417619-69417380 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	186
Alignm E-value:	0
Alignm gaps (pig, cow):	28, 206
Conread position:	90-212
Cow position:	chr11:72568256-72568379 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	101
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	31, 0
Conread position:	90-301
Cow position:	chr11:80370323-80370112 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	156
Alignm E-value:	6e-36
Alignm gaps (pig, cow):	206, 167
Conread position:	90-333
Cow position:	chr11:68909642-68909878 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	171
Alignm E-value:	9e-29
Alignm gaps (pig, cow):	14, 191
Conread position:	91-312
Cow position:	chr11:6395963-6395744 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	172
Alignm E-value:	6e-36
Alignm gaps (pig, cow):	13, 63
Conread position:	91-313
Cow position:	chr11:25604159-25603935 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	174
Alignm E-value:	9.99967e-42
Alignm gaps (pig, cow):	113, 25
Conread position:	91-333
Cow position:	chr11:866489-866260 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	173
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	28, 132
Conread position:	91-337
Cow position:	chr11:3715030-3714789 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	177
Alignm E-value:	8e-39
Alignm gaps (pig, cow):	209, 0
Conread position:	92-313
Cow position:	chr11:26117531-26117734 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	158
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	29, 58
Conread position:	93-278
Cow position:	chr11:36847375-36847190 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	138
Alignm E-value:	1e-33
Alignm gaps (pig, cow):	0, 0
Conread position:	93-335
Cow position:	chr11:32254010-32254251 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	173
Alignm E-value:	8e-39
Alignm gaps (pig, cow):	119, 0
Conread position:	94-315
Cow position:	chr11:86895576-86895362 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	169
Alignm E-value:	9.99967e-42
Alignm gaps (pig, cow):	23, 0
Conread position:	94-328
Cow position:	chr11:65762377-65762618 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	167
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	12, 0