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Cow genome map

           
Conread name:
           
rcsk15_m20.y1
        

               
Conread position:
               
50-315
               

               
Cow position:
               
chr16:40029622-40029880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
75-324
               

               
Cow position:
               
chr16:24142712-24142963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
77-288
               

               
Cow position:
               
chr16:44973844-44973644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
85-307
               

               
Cow position:
               
chr16:33717284-33717064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
214, 12
               

               
Conread position:
               
85-337
               

               
Cow position:
               
chr16:11003331-11003583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
88-274
               

               
Cow position:
               
chr16:24138524-24138707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
89-336
               

               
Cow position:
               
chr16:46655508-46655267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
90-337
               

               
Cow position:
               
chr16:26030657-26030902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
91-302
               

               
Cow position:
               
chr16:47274499-47274711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 163
               

               
Conread position:
               
91-305
               

               
Cow position:
               
chr16:43125723-43125934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 132
               

               
Conread position:
               
91-324
               

               
Cow position:
               
chr16:9279880-9280122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
91-335
               

               
Cow position:
               
chr16:18243963-18243726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
94-327
               

               
Cow position:
               
chr16:54298691-54298460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
95-227
               

               
Cow position:
               
chr16:33790164-33790293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
95-336
               

               
Cow position:
               
chr16:7582937-7582697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
96-270
               

               
Cow position:
               
chr16:52213834-52214008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
105, 123
               

               
Conread position:
               
96-310
               

               
Cow position:
               
chr16:28980053-28979841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr16:9600637-9600401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 99
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr16:23822807-23823045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr16:38243441-38243679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
97-335
               

               
Cow position:
               
chr16:31573465-31573238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
106, 132
               

               
Conread position:
               
98-319
               

               
Cow position:
               
chr16:10033083-10032867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
98-329
               

               
Cow position:
               
chr16:47662947-47662716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
98-335
               

               
Cow position:
               
chr16:11584189-11584420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
98-337
               

               
Cow position:
               
chr16:38905006-38905252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
99-264
               

               
Cow position:
               
chr16:26550822-26550985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
99-335
               

               
Cow position:
               
chr16:8231146-8231369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 147
               

               
Conread position:
               
99-335
               

               
Cow position:
               
chr16:13689880-13689650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
100-296
               

               
Cow position:
               
chr16:6026783-6026975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
105, 149
               

               
Conread position:
               
100-335
               

               
Cow position:
               
chr16:15761937-15762174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
100-337
               

               
Cow position:
               
chr16:11359366-11359133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
100-337
               

               
Cow position:
               
chr16:30662055-30662287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
108, 47
               

               
Conread position:
               
101-271
               

               
Cow position:
               
chr16:27117522-27117352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
101-296
               

               
Cow position:
               
chr16:11775782-11775971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
101-297
               

               
Cow position:
               
chr16:48455887-48455701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr16:42253191-42253393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
189, 31
               

               
Conread position:
               
101-315
               

               
Cow position:
               
chr16:33236068-33236279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
101-316
               

               
Cow position:
               
chr16:32301787-32302004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
101-319
               

               
Cow position:
               
chr16:4321797-4321591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
101-337
               

               
Cow position:
               
chr16:34291085-34291309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
101-337
               

               
Cow position:
               
chr16:49336437-49336210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
101-350
               

               
Cow position:
               
chr16:29159328-29159093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
102-242
               

               
Cow position:
               
chr16:22738966-22739106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
102-317
               

               
Cow position:
               
chr16:14106858-14106644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 149
               

               
Conread position:
               
102-336
               

               
Cow position:
               
chr16:12324672-12324438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
102-337
               

               
Cow position:
               
chr16:31575361-31575126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
103-255
               

               
Cow position:
               
chr16:9616625-9616785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
103-319
               

               
Cow position:
               
chr16:8065672-8065888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
103-322
               

               
Cow position:
               
chr16:38743241-38743023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
104-219
               

               
Cow position:
               
chr16:56474246-56474130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
104-235
               

               
Cow position:
               
chr16:46433944-46434076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
104-259
               

               
Cow position:
               
chr16:7727828-7727983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
81, 122
               

               
Conread position:
               
104-259
               

               
Cow position:
               
chr16:16477413-16477261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
104-271
               

               
Cow position:
               
chr16:43712672-43712505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-271
               

               
Cow position:
               
chr16:51393175-51393343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
104-275
               

               
Cow position:
               
chr16:51281388-51281216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
104-278
               

               
Cow position:
               
chr16:50189164-50189336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
104-282
               

               
Cow position:
               
chr16:30561576-30561408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
104-285
               

               
Cow position:
               
chr16:16543064-16542883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-285
               

               
Cow position:
               
chr16:31701809-31701638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
104-288
               

               
Cow position:
               
chr16:17617149-17617332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
104-297
               

               
Cow position:
               
chr16:4886984-4887165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
169, 33
               

               
Conread position:
               
104-298
               

               
Cow position:
               
chr16:3048940-3049133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
104-298
               

               
Cow position:
               
chr16:4277340-4277533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
104-298
               

               
Cow position:
               
chr16:55961113-55961307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-301
               

               
Cow position:
               
chr16:4911239-4911428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
185, 78
               

               
Conread position:
               
104-303
               

               
Cow position:
               
chr16:4851903-4852096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
104-303
               

               
Cow position:
               
chr16:50943598-50943402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
104-304
               

               
Cow position:
               
chr16:9986844-9987053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
104-304
               

               
Cow position:
               
chr16:16545655-16545453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
104-305
               

               
Cow position:
               
chr16:8493777-8493977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
104-305
               

               
Cow position:
               
chr16:12091868-12091670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
97, 131
               

               
Conread position:
               
104-309
               

               
Cow position:
               
chr16:22323598-22323800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
104-313
               

               
Cow position:
               
chr16:39385699-39385497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr16:5243300-5243090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr16:7928170-7928382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr16:28199239-28199032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr16:30211661-30211457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr16:32587420-32587207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
104-316
               

               
Cow position:
               
chr16:35758413-35758205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
104-319
               

               
Cow position:
               
chr16:12057264-12057051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
104-319
               

               
Cow position:
               
chr16:45045030-45044813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
104-322
               

               
Cow position:
               
chr16:238477-238265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr16:33285182-33285407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 204
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr16:12220901-12220676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr16:27051264-27051040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr16:33198221-33198442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr16:48095558-48095770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr16:50289369-50289147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
104-324
               

               
Cow position:
               
chr16:56874020-56874236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
193, 85
               

               
Conread position:
               
104-332
               

               
Cow position:
               
chr16:16552781-16552548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
104-333
               

               
Cow position:
               
chr16:19644098-19643874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
184, 66
               

               
Conread position:
               
104-333
               

               
Cow position:
               
chr16:34256823-34257052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-335
               

               
Cow position:
               
chr16:31149587-31149362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
104-335
               

               
Cow position:
               
chr16:54579379-54579151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
104-336
               

               
Cow position:
               
chr16:956673-956912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
202, 79
               

               
Conread position:
               
104-336
               

               
Cow position:
               
chr16:11915994-11916232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
104-336
               

               
Cow position:
               
chr16:14242582-14242354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
104-336
               

               
Cow position:
               
chr16:14323986-14324213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
166, 43
               

               
Conread position:
               
104-337
               

               
Cow position:
               
chr16:5907571-5907333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
104-337
               

               
Cow position:
               
chr16:20205671-20205443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
104-337
               

               
Cow position:
               
chr16:24617284-24617052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
104-337
               

               
Cow position:
               
chr16:39682887-39683119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
104-337
               

               
Cow position:
               
chr16:47303900-47304143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
104-337
               

               
Cow position:
               
chr16:50409461-50409227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
104-338
               

               
Cow position:
               
chr16:13611227-13611473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
104-339
               

               
Cow position:
               
chr16:6609295-6609524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
104-382
               

               
Cow position:
               
chr16:11390062-11390350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
105-235
               

               
Cow position:
               
chr16:52365691-52365822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
105-259
               

               
Cow position:
               
chr16:51870119-51869968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
105-261
               

               
Cow position:
               
chr16:45260773-45260928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
105-280
               

               
Cow position:
               
chr16:12256169-12255996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
95, 114
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr16:23058222-23058452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
107, 72
               

               
Conread position:
               
105-337
               

               
Cow position:
               
chr16:7441890-7442116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
105-337
               

               
Cow position:
               
chr16:15407345-15407575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
106-316
               

               
Cow position:
               
chr16:7151960-7152168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
106-330
               

               
Cow position:
               
chr16:6854569-6854778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
106-336
               

               
Cow position:
               
chr16:53428464-53428240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
107-264
               

               
Cow position:
               
chr16:831515-831679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
76, 134
               

               
Conread position:
               
107-267
               

               
Cow position:
               
chr16:45603957-45603798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
107-308
               

               
Cow position:
               
chr16:12108162-12108370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
107-316
               

               
Cow position:
               
chr16:6887238-6887447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
107-316
               

               
Cow position:
               
chr16:43758437-43758643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
107-324
               

               
Cow position:
               
chr16:30290520-30290303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-337
               

               
Cow position:
               
chr16:20872220-20872004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
108-324
               

               
Cow position:
               
chr16:3821739-3821523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
108-324
               

               
Cow position:
               
chr16:34728952-34728732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-340
               

               
Cow position:
               
chr16:45047056-45046815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
90, 178
               

               
Conread position:
               
109-225
               

               
Cow position:
               
chr16:31471886-31471770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-237
               

               
Cow position:
               
chr16:27004080-27003949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
109-243
               

               
Cow position:
               
chr16:48875695-48875836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
109-275
               

               
Cow position:
               
chr16:12275584-12275748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
109-288
               

               
Cow position:
               
chr16:889169-889338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
109-297
               

               
Cow position:
               
chr16:12276279-12276466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr16:8288744-8288936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
109-316
               

               
Cow position:
               
chr16:15726145-15726355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
109-324
               

               
Cow position:
               
chr16:17746051-17745831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
109-324
               

               
Cow position:
               
chr16:45813491-45813701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
109-337
               

               
Cow position:
               
chr16:45943559-45943792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
110-250
               

               
Cow position:
               
chr16:39398762-39398902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-256
               

               
Cow position:
               
chr16:56689928-56690076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
110-272
               

               
Cow position:
               
chr16:31493255-31493096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
110-278
               

               
Cow position:
               
chr16:3938806-3938970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
110-278
               

               
Cow position:
               
chr16:11467809-11467641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-278
               

               
Cow position:
               
chr16:46184367-46184198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
110-313
               

               
Cow position:
               
chr16:48145200-48145397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
110-314
               

               
Cow position:
               
chr16:38384284-38384485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
110-323
               

               
Cow position:
               
chr16:30305611-30305816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr16:45348596-45348376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
110-333
               

               
Cow position:
               
chr16:21369984-21370201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
110-335
               

               
Cow position:
               
chr16:9905302-9905074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
110-335
               

               
Cow position:
               
chr16:10039638-10039860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
110-335
               

               
Cow position:
               
chr16:11134779-11134997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
110-336
               

               
Cow position:
               
chr16:35074772-35074545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
12, 144
               

               
Conread position:
               
110-337
               

               
Cow position:
               
chr16:12379135-12379370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
110-337
               

               
Cow position:
               
chr16:13306665-13306889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
110-337
               

               
Cow position:
               
chr16:42539372-42539606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
32, 183
               

               
Conread position:
               
110-337
               

               
Cow position:
               
chr16:54342211-54341966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
110-337
               

               
Cow position:
               
chr16:56082156-56082383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-337
               

               
Cow position:
               
chr16:56796448-56796684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
110-338
               

               
Cow position:
               
chr16:16597765-16597538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
110-342
               

               
Cow position:
               
chr16:49125315-49125551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
111-196
               

               
Cow position:
               
chr16:50010982-50011068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
111-221
               

               
Cow position:
               
chr16:12085604-12085717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
111-233
               

               
Cow position:
               
chr16:25610232-25610110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
111-234
               

               
Cow position:
               
chr16:51477590-51477464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
111-271
               

               
Cow position:
               
chr16:26842955-26842793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
111-278
               

               
Cow position:
               
chr16:18669165-18669001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
111-296
               

               
Cow position:
               
chr16:24672655-24672840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
92, 120
               

               
Conread position:
               
111-297
               

               
Cow position:
               
chr16:56614722-56614544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
111-301
               

               
Cow position:
               
chr16:17665860-17665673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
111-314
               

               
Cow position:
               
chr16:12077276-12077479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
111-315
               

               
Cow position:
               
chr16:18953786-18953588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 18
               

               
Conread position:
               
111-316
               

               
Cow position:
               
chr16:13483371-13483572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
111-334
               

               
Cow position:
               
chr16:48567734-48567518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
111-335
               

               
Cow position:
               
chr16:46433119-46433343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
111-336
               

               
Cow position:
               
chr16:13698724-13698498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
111-337
               

               
Cow position:
               
chr16:9830653-9830427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
111-337
               

               
Cow position:
               
chr16:23955626-23955850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
111-337
               

               
Cow position:
               
chr16:54664597-54664818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
112-297
               

               
Cow position:
               
chr16:51531206-51531390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
112-300
               

               
Cow position:
               
chr16:37064654-37064850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
112-310
               

               
Cow position:
               
chr16:44144595-44144397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 100
               

               
Conread position:
               
112-315
               

               
Cow position:
               
chr16:9959033-9958833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
189, 90
               

               
Conread position:
               
112-315
               

               
Cow position:
               
chr16:10011643-10011845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
112-315
               

               
Cow position:
               
chr16:44394491-44394285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 201
               

               
Conread position:
               
112-319
               

               
Cow position:
               
chr16:4971817-4972027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
112-324
               

               
Cow position:
               
chr16:7011276-7011064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-333
               

               
Cow position:
               
chr16:7136142-7136359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 85
               

               
Conread position:
               
112-335
               

               
Cow position:
               
chr16:34753749-34753976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
112-335
               

               
Cow position:
               
chr16:51795401-51795619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
112-337
               

               
Cow position:
               
chr16:22984954-22984738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
112-337
               

               
Cow position:
               
chr16:29712620-29712402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
112-337
               

               
Cow position:
               
chr16:32142297-32142072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 106
               

               
Conread position:
               
112-337
               

               
Cow position:
               
chr16:34998418-34998639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
88, 179
               

               
Conread position:
               
113-260
               

               
Cow position:
               
chr16:23034032-23033886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
113-271
               

               
Cow position:
               
chr16:8083723-8083882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
113-291
               

               
Cow position:
               
chr16:41696210-41696036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
113-302
               

               
Cow position:
               
chr16:14343785-14343596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
113-304
               

               
Cow position:
               
chr16:56580109-56579924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
113-312
               

               
Cow position:
               
chr16:13995992-13996189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr16:30908744-30908951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
113-337
               

               
Cow position:
               
chr16:18206159-18205942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
114-279
               

               
Cow position:
               
chr16:33073683-33073841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
114-305
               

               
Cow position:
               
chr16:23718772-23718961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
114-305
               

               
Cow position:
               
chr16:56850550-56850361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
114-307
               

               
Cow position:
               
chr16:11019311-11019504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
185, 140
               

               
Conread position:
               
114-309
               

               
Cow position:
               
chr16:17180361-17180169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
133, 33
               

               
Conread position:
               
114-315
               

               
Cow position:
               
chr16:56595185-56595385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
114-316
               

               
Cow position:
               
chr16:34153367-34153564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
114-324
               

               
Cow position:
               
chr16:31484464-31484667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
114-337
               

               
Cow position:
               
chr16:47835121-47834910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
115-323
               

               
Cow position:
               
chr16:33705003-33704803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
115-336
               

               
Cow position:
               
chr16:15905042-15905267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
116-288
               

               
Cow position:
               
chr16:19282207-19282036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
116-302
               

               
Cow position:
               
chr16:49215809-49215985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
116-305
               

               
Cow position:
               
chr16:11177954-11177768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
116-317
               

               
Cow position:
               
chr16:42078648-42078845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
116-324
               

               
Cow position:
               
chr16:7626353-7626155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
116-335
               

               
Cow position:
               
chr16:4856899-4857115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
116-335
               

               
Cow position:
               
chr16:19052833-19052619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
116-339
               

               
Cow position:
               
chr16:44210358-44210578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
117-220
               

               
Cow position:
               
chr16:24636011-24636114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-245
               

               
Cow position:
               
chr16:4077841-4077976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
117-252
               

               
Cow position:
               
chr16:12096652-12096788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
117-256
               

               
Cow position:
               
chr16:19756580-19756714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
117-259
               

               
Cow position:
               
chr16:51216846-51216986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
117-261
               

               
Cow position:
               
chr16:16935324-16935460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
117-261
               

               
Cow position:
               
chr16:41095929-41095787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
117-269
               

               
Cow position:
               
chr16:20664311-20664160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
117-269
               

               
Cow position:
               
chr16:21974759-21974914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
117-270
               

               
Cow position:
               
chr16:20270280-20270130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
117-271
               

               
Cow position:
               
chr16:30054901-30055054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
117-278
               

               
Cow position:
               
chr16:10173074-10173231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
117-281
               

               
Cow position:
               
chr16:12111769-12111928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
117-281
               

               
Cow position:
               
chr16:23515567-23515728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
117-281
               

               
Cow position:
               
chr16:49733946-49734108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
117-286
               

               
Cow position:
               
chr16:48130197-48130362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 81
               

               
Conread position:
               
117-288
               

               
Cow position:
               
chr16:23089040-23088876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
117-288
               

               
Cow position:
               
chr16:30646708-30646543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
117-289
               

               
Cow position:
               
chr16:20614695-20614528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
88, 104
               

               
Conread position:
               
117-294
               

               
Cow position:
               
chr16:49388587-49388417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
173, 65
               

               
Conread position:
               
117-295
               

               
Cow position:
               
chr16:336386-336564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-297
               

               
Cow position:
               
chr16:4615259-4615079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-297
               

               
Cow position:
               
chr16:18429787-18429609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
117-298
               

               
Cow position:
               
chr16:9097225-9097044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-298
               

               
Cow position:
               
chr16:50569459-50569284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
117-299
               

               
Cow position:
               
chr16:12251222-12251040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
117-299
               

               
Cow position:
               
chr16:16163514-16163686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
117-301
               

               
Cow position:
               
chr16:29311727-29311541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
117-302
               

               
Cow position:
               
chr16:53451904-53451722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
117-303
               

               
Cow position:
               
chr16:56126579-56126766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
117-304
               

               
Cow position:
               
chr16:33302384-33302199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
117-305
               

               
Cow position:
               
chr16:6343707-6343895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 131
               

               
Conread position:
               
117-305
               

               
Cow position:
               
chr16:10020741-10020555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
117-305
               

               
Cow position:
               
chr16:21044498-21044310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-305
               

               
Cow position:
               
chr16:33290586-33290398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-306
               

               
Cow position:
               
chr16:50906677-50906490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
117-307
               

               
Cow position:
               
chr16:10140536-10140349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
182, 35
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr16:4102643-4102820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr16:7612081-7611874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
117-309
               

               
Cow position:
               
chr16:9018075-9017883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 146
               

               
Conread position:
               
117-309
               

               
Cow position:
               
chr16:54585506-54585317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
173, 65
               

               
Conread position:
               
117-312
               

               
Cow position:
               
chr16:47243161-47242969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
117-313
               

               
Cow position:
               
chr16:48956998-48956804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
117-314
               

               
Cow position:
               
chr16:38355232-38355422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
117-314
               

               
Cow position:
               
chr16:56615303-56615498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
117-314
               

               
Cow position:
               
chr16:56912488-56912682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
117-315
               

               
Cow position:
               
chr16:11815391-11815589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
117-315
               

               
Cow position:
               
chr16:12091453-12091659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
117-315
               

               
Cow position:
               
chr16:13696480-13696678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-316
               

               
Cow position:
               
chr16:3032515-3032714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-316
               

               
Cow position:
               
chr16:12102733-12102543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
117-316
               

               
Cow position:
               
chr16:18353755-18353953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
117-316
               

               
Cow position:
               
chr16:18470661-18470463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr16:21442410-21442605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
117-319
               

               
Cow position:
               
chr16:10249617-10249819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-319
               

               
Cow position:
               
chr16:15714311-15714109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-319
               

               
Cow position:
               
chr16:29096116-29095921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
117-319
               

               
Cow position:
               
chr16:39029894-39030099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
117-320
               

               
Cow position:
               
chr16:22776219-22776423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
117-323
               

               
Cow position:
               
chr16:44654084-44654285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr16:1548682-1548883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr16:14210583-14210777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr16:17134862-17135065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr16:22841848-22842062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr16:42398690-42398903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
162, 191
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr16:46552992-46552789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr16:50442751-50442543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr16:52170252-52170050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
117-324
               

               
Cow position:
               
chr16:56893416-56893620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
117-327
               

               
Cow position:
               
chr16:47820773-47820560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
117-328
               

               
Cow position:
               
chr16:38244419-38244634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
90, 105
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr16:8738266-8738051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
117-335
               

               
Cow position:
               
chr16:8958859-8959074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
117-335
               

               
Cow position:
               
chr16:39516397-39516614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
148, 94
               

               
Conread position:
               
117-335
               

               
Cow position:
               
chr16:45122241-45122019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
117-335
               

               
Cow position:
               
chr16:50678071-50678293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
117-336
               

               
Cow position:
               
chr16:591605-591828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
117-336
               

               
Cow position:
               
chr16:8710991-8711213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
117-336
               

               
Cow position:
               
chr16:12543190-12542966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
117-336
               

               
Cow position:
               
chr16:29557425-29557648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
117-336
               

               
Cow position:
               
chr16:45700281-45700502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
117-336
               

               
Cow position:
               
chr16:47633073-47632846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
86, 118
               

               
Conread position:
               
117-336
               

               
Cow position:
               
chr16:50286712-50286496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
117-336
               

               
Cow position:
               
chr16:51598414-51598629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:820450-820232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
112, 81
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:2751173-2750963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:7583597-7583379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:8025670-8025873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:8193655-8193435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:9578294-9578509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:11083195-11082980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:17283641-17283428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:18047953-18048173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:19670159-19670371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:28444288-28444508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:30174322-30174546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 190
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:40446467-40446244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
86, 179
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:42432918-42433129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:43308366-43308578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:44138291-44138510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:48448940-48448705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
65, 148
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:50282236-50282451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
165, 29
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:52274936-52275147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:55683497-55683283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr16:55965385-55965165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
91, 141
               

               
Conread position:
               
117-338
               

               
Cow position:
               
chr16:23472941-23472730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
117-339
               

               
Cow position:
               
chr16:31117420-31117634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
117-340
               

               
Cow position:
               
chr16:23564337-23564113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 198
               

               
Conread position:
               
117-365
               

               
Cow position:
               
chr16:9932698-9932451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
118-218
               

               
Cow position:
               
chr16:21581856-21581757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
118-250
               

               
Cow position:
               
chr16:24671843-24671982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
118-323
               

               
Cow position:
               
chr16:56665764-56665571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
118-337
               

               
Cow position:
               
chr16:33595750-33595955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
118-337
               

               
Cow position:
               
chr16:49229576-49229786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
119-220
               

               
Cow position:
               
chr16:11634868-11634767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-236
               

               
Cow position:
               
chr16:19720619-19720736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-244
               

               
Cow position:
               
chr16:39646807-39646688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
119-255
               

               
Cow position:
               
chr16:30368628-30368763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 107
               

               
Conread position:
               
119-260
               

               
Cow position:
               
chr16:33411894-33411754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
119-267
               

               
Cow position:
               
chr16:31559101-31558953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-274
               

               
Cow position:
               
chr16:42992416-42992261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-279
               

               
Cow position:
               
chr16:28775521-28775683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
119-280
               

               
Cow position:
               
chr16:50078560-50078720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
119-281
               

               
Cow position:
               
chr16:42107826-42107667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
119-288
               

               
Cow position:
               
chr16:16968511-16968671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
119-288
               

               
Cow position:
               
chr16:52325399-52325568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-296
               

               
Cow position:
               
chr16:27326925-27327104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
119-299
               

               
Cow position:
               
chr16:12457887-12458063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
119-299
               

               
Cow position:
               
chr16:28233108-28233285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
119-302
               

               
Cow position:
               
chr16:22972573-22972756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
96, 171
               

               
Conread position:
               
119-303
               

               
Cow position:
               
chr16:11364860-11365044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-303
               

               
Cow position:
               
chr16:43909639-43909826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
119-305
               

               
Cow position:
               
chr16:13295800-13295614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-306
               

               
Cow position:
               
chr16:8973011-8973198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-307
               

               
Cow position:
               
chr16:20743119-20743302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
119-307
               

               
Cow position:
               
chr16:45278735-45278548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
119-310
               

               
Cow position:
               
chr16:8809900-8810085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
119-310
               

               
Cow position:
               
chr16:24674476-24674669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
84, 8
               

               
Conread position:
               
119-312
               

               
Cow position:
               
chr16:8469877-8469684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-312
               

               
Cow position:
               
chr16:11094626-11094820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 123
               

               
Conread position:
               
119-312
               

               
Cow position:
               
chr16:12819196-12819002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
119-312
               

               
Cow position:
               
chr16:15927435-15927242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-313
               

               
Cow position:
               
chr16:8448463-8448644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
119-315
               

               
Cow position:
               
chr16:19047236-19047430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
119-315
               

               
Cow position:
               
chr16:56265700-56265504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
171, 178
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr16:9603004-9602809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr16:19076958-19077154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr16:23395162-23395356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr16:25369586-25369389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr16:29815170-29814976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr16:38663511-38663707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr16:42038261-42038064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
191, 16
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr16:53813452-53813650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr16:55042369-55042565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
119-317
               

               
Cow position:
               
chr16:26501645-26501461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
119-319
               

               
Cow position:
               
chr16:15824244-15824444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
119-320
               

               
Cow position:
               
chr16:32869691-32869497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
119-321
               

               
Cow position:
               
chr16:9615018-9615219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
119-321
               

               
Cow position:
               
chr16:49252369-49252553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
119-323
               

               
Cow position:
               
chr16:23739832-23740030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
119-323
               

               
Cow position:
               
chr16:52357339-52357544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
119-323
               

               
Cow position:
               
chr16:56173384-56173588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:5382383-5382173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:10160982-10161185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:16842332-16842533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:18255984-18256192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:18572858-18573059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:23483478-23483277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:23811326-23811119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 169
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:24202664-24202870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:30936060-30935854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:32536837-32536634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:44743933-44744138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-324
               

               
Cow position:
               
chr16:55613304-55613509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-331
               

               
Cow position:
               
chr16:53720142-53720354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-332
               

               
Cow position:
               
chr16:9729395-9729182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-333
               

               
Cow position:
               
chr16:8090332-8090547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
119-334
               

               
Cow position:
               
chr16:21451047-21450831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
199, 0
               

               
Conread position:
               
119-334
               

               
Cow position:
               
chr16:31269340-31269125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-335
               

               
Cow position:
               
chr16:6016187-6016396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
119-335
               

               
Cow position:
               
chr16:9497063-9497284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
119-335
               

               
Cow position:
               
chr16:21002175-21002401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
119-335
               

               
Cow position:
               
chr16:46548065-46548285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:7429579-7429361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:7665837-7665619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:9560288-9560513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:12274267-12274052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:15254576-15254771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:16232256-16232036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:30186841-30186627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:42733824-42734029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:44429074-44428865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
119-337
               

               
Cow position:
               
chr16:49860430-49860214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
171, 8
               

               
Conread position:
               
119-339
               

               
Cow position:
               
chr16:589530-589730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
119-342
               

               
Cow position:
               
chr16:8522194-8522409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
204, 35
               

               
Conread position:
               
120-271
               

               
Cow position:
               
chr16:28001031-28001185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
120-278
               

               
Cow position:
               
chr16:30364407-30364249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-298
               

               
Cow position:
               
chr16:8953478-8953662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 144
               

               
Conread position:
               
120-302
               

               
Cow position:
               
chr16:8205886-8206067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
120-302
               

               
Cow position:
               
chr16:37154420-37154232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
120-304
               

               
Cow position:
               
chr16:51143995-51143814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
120-305
               

               
Cow position:
               
chr16:38581201-38581016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-307
               

               
Cow position:
               
chr16:48613282-48613465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
120-311
               

               
Cow position:
               
chr16:29766516-29766334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
120-312
               

               
Cow position:
               
chr16:48093922-48094110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
120-314
               

               
Cow position:
               
chr16:35297598-35297413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
120-315
               

               
Cow position:
               
chr16:12507063-12507258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-315
               

               
Cow position:
               
chr16:45193612-45193805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
120-316
               

               
Cow position:
               
chr16:9513488-9513297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
120-316
               

               
Cow position:
               
chr16:17474952-17474768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
120-316
               

               
Cow position:
               
chr16:19478572-19478762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
120-316
               

               
Cow position:
               
chr16:56670714-56670916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
120-321
               

               
Cow position:
               
chr16:13053744-13053546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
179, 75
               

               
Conread position:
               
120-323
               

               
Cow position:
               
chr16:14841560-14841355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
120-323
               

               
Cow position:
               
chr16:23681557-23681362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
199, 78
               

               
Conread position:
               
120-323
               

               
Cow position:
               
chr16:29380454-29380244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
120-323
               

               
Cow position:
               
chr16:55784550-55784762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 95
               

               
Conread position:
               
120-324
               

               
Cow position:
               
chr16:10523831-10523627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-324
               

               
Cow position:
               
chr16:14376977-14376777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
120-324
               

               
Cow position:
               
chr16:14386787-14386586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
120-324
               

               
Cow position:
               
chr16:42444356-42444151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
120-324
               

               
Cow position:
               
chr16:47852402-47852598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
120-335
               

               
Cow position:
               
chr16:42977670-42977449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 103
               

               
Conread position:
               
120-336
               

               
Cow position:
               
chr16:7496445-7496239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
120-336
               

               
Cow position:
               
chr16:48581123-48580901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
120-337
               

               
Cow position:
               
chr16:8673414-8673627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
120-337
               

               
Cow position:
               
chr16:17143134-17142916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 124
               

               
Conread position:
               
120-337
               

               
Cow position:
               
chr16:29026409-29026190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
120-337
               

               
Cow position:
               
chr16:36286491-36286700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
120-337
               

               
Cow position:
               
chr16:41530112-41530318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
120-337
               

               
Cow position:
               
chr16:52389827-52389602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 151
               

               
Conread position:
               
120-339
               

               
Cow position:
               
chr16:11629164-11628944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
214, 0
               

               
Conread position:
               
121-215
               

               
Cow position:
               
chr16:17209108-17209203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
121-256
               

               
Cow position:
               
chr16:1856799-1856664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-289
               

               
Cow position:
               
chr16:17746228-17746067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
121-302
               

               
Cow position:
               
chr16:25419056-25419237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-312
               

               
Cow position:
               
chr16:17027722-17027531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 123
               

               
Conread position:
               
121-316
               

               
Cow position:
               
chr16:24895485-24895289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
121-316
               

               
Cow position:
               
chr16:36651787-36651594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
121-324
               

               
Cow position:
               
chr16:3246008-3246210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
121-327
               

               
Cow position:
               
chr16:10122303-10122510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
121-333
               

               
Cow position:
               
chr16:45678172-45677964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
121-335
               

               
Cow position:
               
chr16:9730010-9730222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
121-335
               

               
Cow position:
               
chr16:10032834-10032623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
121-336
               

               
Cow position:
               
chr16:13886261-13886478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
121-337
               

               
Cow position:
               
chr16:2223199-2223415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
121-337
               

               
Cow position:
               
chr16:15370878-15370666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
189, 52
               

               
Conread position:
               
121-339
               

               
Cow position:
               
chr16:258088-258299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
122-281
               

               
Cow position:
               
chr16:5396622-5396779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
122-333
               

               
Cow position:
               
chr16:15945058-15945270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
122-335
               

               
Cow position:
               
chr16:20476727-20476519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
122-337
               

               
Cow position:
               
chr16:14685196-14685411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
122-337
               

               
Cow position:
               
chr16:39165427-39165222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
122-338
               

               
Cow position:
               
chr16:29038111-29037901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
123-259
               

               
Cow position:
               
chr16:55259274-55259407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
125-280
               

               
Cow position:
               
chr16:27759409-27759567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
125-311
               

               
Cow position:
               
chr16:15949317-15949500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
125-313
               

               
Cow position:
               
chr16:18757644-18757833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
125-315
               

               
Cow position:
               
chr16:7812884-7812694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
125-319
               

               
Cow position:
               
chr16:16025635-16025436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
125-324
               

               
Cow position:
               
chr16:22773164-22772974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
125-333
               

               
Cow position:
               
chr16:424618-424827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 119
               

               
Conread position:
               
125-333
               

               
Cow position:
               
chr16:31561945-31561741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
125-335
               

               
Cow position:
               
chr16:10148458-10148266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
125-339
               

               
Cow position:
               
chr16:12939808-12939599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
205, 73
               

               
Conread position:
               
126-334
               

               
Cow position:
               
chr16:10171731-10171523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
127-330
               

               
Cow position:
               
chr16:33632489-33632686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
127-335
               

               
Cow position:
               
chr16:12010287-12010079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
127-337
               

               
Cow position:
               
chr16:11957389-11957596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
127-337
               

               
Cow position:
               
chr16:14754139-14754345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
152, 57
               

               
Conread position:
               
128-245
               

               
Cow position:
               
chr16:11173516-11173631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
128-264
               

               
Cow position:
               
chr16:7270347-7270482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
128-299
               

               
Cow position:
               
chr16:22927714-22927542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
128-306
               

               
Cow position:
               
chr16:9242396-9242214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
128-311
               

               
Cow position:
               
chr16:15023446-15023623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
128-315
               

               
Cow position:
               
chr16:32512115-32512302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-316
               

               
Cow position:
               
chr16:4507879-4507699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
128-316
               

               
Cow position:
               
chr16:42201093-42200902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 83
               

               
Conread position:
               
128-324
               

               
Cow position:
               
chr16:8841085-8840885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
128-324
               

               
Cow position:
               
chr16:40454733-40454537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-332
               

               
Cow position:
               
chr16:31565553-31565757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-333
               

               
Cow position:
               
chr16:4910334-4910539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-335
               

               
Cow position:
               
chr16:26676501-26676701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
128-336
               

               
Cow position:
               
chr16:34223640-34223434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
128-337
               

               
Cow position:
               
chr16:31241104-31241308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
128-339
               

               
Cow position:
               
chr16:33646203-33645995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
129-324
               

               
Cow position:
               
chr16:14568304-14568494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
129-327
               

               
Cow position:
               
chr16:12320410-12320213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
130-264
               

               
Cow position:
               
chr16:21241717-21241586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
130-288
               

               
Cow position:
               
chr16:11654230-11654073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
130-288
               

               
Cow position:
               
chr16:29060570-29060408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
130-307
               

               
Cow position:
               
chr16:6802496-6802678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
130-309
               

               
Cow position:
               
chr16:30910805-30910628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
130-324
               

               
Cow position:
               
chr16:11389384-11389578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
130-336
               

               
Cow position:
               
chr16:24703036-24702837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
130-336
               

               
Cow position:
               
chr16:51610639-51610852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
130-337
               

               
Cow position:
               
chr16:9596553-9596352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
130-337
               

               
Cow position:
               
chr16:15960092-15960308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
130-339
               

               
Cow position:
               
chr16:56821794-56821580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
176, 72
               

               
Conread position:
               
131-333
               

               
Cow position:
               
chr16:27701077-27701273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
132-288
               

               
Cow position:
               
chr16:12976654-12976499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
132-305
               

               
Cow position:
               
chr16:37299978-37299806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
132-324
               

               
Cow position:
               
chr16:46807354-46807545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
132-336
               

               
Cow position:
               
chr16:48917659-48917456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
133-337
               

               
Cow position:
               
chr16:4192248-4192443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
137-286
               

               
Cow position:
               
chr16:23187732-23187577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
137-337
               

               
Cow position:
               
chr16:13252140-13252324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
137-337
               

               
Cow position:
               
chr16:42241944-42242135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
138-314
               

               
Cow position:
               
chr16:12523236-12523061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
138-337
               

               
Cow position:
               
chr16:1220000-1220196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
139-319
               

               
Cow position:
               
chr16:43866669-43866854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
139-324
               

               
Cow position:
               
chr16:2417409-2417594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-335
               

               
Cow position:
               
chr16:13578678-13578877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
139-338
               

               
Cow position:
               
chr16:42864558-42864757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
195, 83
               

               
Conread position:
               
141-337
               

               
Cow position:
               
chr16:33267896-33267697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 176
               

               
Conread position:
               
142-316
               

               
Cow position:
               
chr16:37452440-37452611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
8, 55
               

               
Conread position:
               
143-264
               

               
Cow position:
               
chr16:24202982-24203103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-335
               

               
Cow position:
               
chr16:33405317-33405510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
145-333
               

               
Cow position:
               
chr16:41578397-41578212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
145-337
               

               
Cow position:
               
chr16:7619003-7619195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
148-336
               

               
Cow position:
               
chr16:53508820-53509002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
149-342
               

               
Cow position:
               
chr16:43185466-43185274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
154-337
               

               
Cow position:
               
chr16:8273674-8273856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
155-305
               

               
Cow position:
               
chr16:22327680-22327524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
155-307
               

               
Cow position:
               
chr16:22738438-22738288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
155-316
               

               
Cow position:
               
chr16:19053721-19053880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
158-316
               

               
Cow position:
               
chr16:48086715-48086865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
163-310
               

               
Cow position:
               
chr16:12836073-12836219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
163-337
               

               
Cow position:
               
chr16:13969207-13969389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
165-337
               

               
Cow position:
               
chr16:45299765-45299946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
168-337
               

               
Cow position:
               
chr16:6213745-6213582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
171-288
               

               
Cow position:
               
chr16:9950792-9950906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
171-316
               

               
Cow position:
               
chr16:45457112-45456965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
178-315
               

               
Cow position:
               
chr16:49169240-49169377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
179-323
               

               
Cow position:
               
chr16:6319343-6319198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
180-324
               

               
Cow position:
               
chr16:28922912-28922768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
181-310
               

               
Cow position:
               
chr16:54091256-54091386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
181-337
               

               
Cow position:
               
chr16:4736445-4736602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
182-296
               

               
Cow position:
               
chr16:27032713-27032599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-313
               

               
Cow position:
               
chr16:42633607-42633738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-315
               

               
Cow position:
               
chr16:53614231-53614100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
182-324
               

               
Cow position:
               
chr16:6232393-6232251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-337
               

               
Cow position:
               
chr16:9500661-9500504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
183-330
               

               
Cow position:
               
chr16:30601557-30601410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-337
               

               
Cow position:
               
chr16:8933292-8933443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
183-337
               

               
Cow position:
               
chr16:12501023-12501178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
183-337
               

               
Cow position:
               
chr16:39202276-39202122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 151
               

               
Conread position:
               
185-322
               

               
Cow position:
               
chr16:18052466-18052329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
185-337
               

               
Cow position:
               
chr16:7550100-7549950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
186-316
               

               
Cow position:
               
chr16:22329294-22329164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-337
               

               
Cow position:
               
chr16:48545954-48545803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
189-324
               

               
Cow position:
               
chr16:16945167-16945303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 117
               

               
Conread position:
               
194-337
               

               
Cow position:
               
chr16:30358938-30359081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-324
               

               
Cow position:
               
chr16:14338666-14338539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
202-337
               

               
Cow position:
               
chr16:29677517-29677652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-337
               

               
Cow position:
               
chr16:23871534-23871668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.