Cow genome map


           Conread name:
           rcsk16_b21.y1
        

               Conread position:
               1-324
               

               Cow position:
               chr8:8012296-8011969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               1-332
               

               Cow position:
               chr8:17213715-17213390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 160
               

               Conread position:
               3-332
               

               Cow position:
               chr8:22394282-22393955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 110
               

               Conread position:
               15-327
               

               Cow position:
               chr8:5810083-5810400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               66-326
               

               Cow position:
               chr8:42700871-42700611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               83-328
               

               Cow position:
               chr8:23393060-23392823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               176, 0
               

               Conread position:
               91-366
               

               Cow position:
               chr8:20807915-20807651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               34, 90
               

               Conread position:
               104-329
               

               Cow position:
               chr8:18793337-18793554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               107-329
               

               Cow position:
               chr8:19616854-19617082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               139-324
               

               Cow position:
               chr8:29810726-29810537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               139-328
               

               Cow position:
               chr8:20924113-20923929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               326-491
               

               Cow position:
               chr8:42817133-42817294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               113, 0
               
Show alignments to all cow chromosomes.