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Cow genome map

           
Conread name:
           
rcsk29_e20.y1
        

               
Conread position:
               
84-385
               

               
Cow position:
               
chr12:31517368-31517059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
90-409
               

               
Cow position:
               
chr12:26218009-26217675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 8
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr12:4162553-4162220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
98-335
               

               
Cow position:
               
chr12:10491086-10491332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 196
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr12:5635630-5635371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
105-385
               

               
Cow position:
               
chr12:30662127-30661825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
105-403
               

               
Cow position:
               
chr12:31429748-31429446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
107-356
               

               
Cow position:
               
chr12:46121005-46120749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
110-360
               

               
Cow position:
               
chr12:3197102-3197354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
112-354
               

               
Cow position:
               
chr12:38126691-38126444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
120-338
               

               
Cow position:
               
chr12:44905487-44905691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
120-354
               

               
Cow position:
               
chr12:2711335-2711577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
120-356
               

               
Cow position:
               
chr12:7000769-7000523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
120-392
               

               
Cow position:
               
chr12:4866657-4866944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
121-356
               

               
Cow position:
               
chr12:4596301-4596548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
121-356
               

               
Cow position:
               
chr12:28213353-28213591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
121-406
               

               
Cow position:
               
chr12:35771183-35770875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
122-343
               

               
Cow position:
               
chr12:42174258-42174485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
122-349
               

               
Cow position:
               
chr12:10942126-10942362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
122-350
               

               
Cow position:
               
chr12:7299624-7299383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
122-356
               

               
Cow position:
               
chr12:42162876-42163120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
122-384
               

               
Cow position:
               
chr12:23916680-23916962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
122-406
               

               
Cow position:
               
chr12:34466169-34465869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 243
               

               
Conread position:
               
123-352
               

               
Cow position:
               
chr12:8943380-8943147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
123-354
               

               
Cow position:
               
chr12:15173664-15173903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
124-363
               

               
Cow position:
               
chr12:45820520-45820277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
92, 106
               

               
Conread position:
               
124-387
               

               
Cow position:
               
chr12:23574609-23574875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
125-402
               

               
Cow position:
               
chr12:31198602-31198887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
125-410
               

               
Cow position:
               
chr12:18577685-18577980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
5, 90
               

               
Conread position:
               
127-356
               

               
Cow position:
               
chr12:44517893-44517656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
128-350
               

               
Cow position:
               
chr12:40807246-40807479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
129-352
               

               
Cow position:
               
chr12:46314854-46314627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
129-354
               

               
Cow position:
               
chr12:37993878-37993652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
131-338
               

               
Cow position:
               
chr12:8869031-8868818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 148
               

               
Conread position:
               
131-340
               

               
Cow position:
               
chr12:19507478-19507703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
131-343
               

               
Cow position:
               
chr12:5800881-5801112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr12:23855683-23855902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
131-347
               

               
Cow position:
               
chr12:44595965-44595737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
131-348
               

               
Cow position:
               
chr12:5905901-5906130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
131-348
               

               
Cow position:
               
chr12:7960730-7960510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 184
               

               
Conread position:
               
131-348
               

               
Cow position:
               
chr12:24662962-24663188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr12:7977889-7978112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr12:19691388-19691159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr12:29770727-29770504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr12:34473778-34473550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr12:35368487-35368717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr12:28582658-28582434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr12:33976046-33976275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
131-354
               

               
Cow position:
               
chr12:25444772-25444995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
131-355
               

               
Cow position:
               
chr12:6410886-6410653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr12:17774645-17774876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr12:27037599-27037368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
131-356
               

               
Cow position:
               
chr12:41473937-41474171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
131-357
               

               
Cow position:
               
chr12:42181292-42181046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-363
               

               
Cow position:
               
chr12:3950499-3950255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
131-373
               

               
Cow position:
               
chr12:41216038-41215784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 247
               

               
Conread position:
               
131-379
               

               
Cow position:
               
chr12:29780053-29779808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
131-386
               

               
Cow position:
               
chr12:32169387-32169651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
131-391
               

               
Cow position:
               
chr12:42966844-42967124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr12:24023949-24023666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr12:7884824-7884531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr12:11587619-11587918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr12:27563531-27563230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr12:30805700-30806001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr12:31532562-31532260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr12:33851205-33851505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr12:34161262-34161552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr12:38774393-38774096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr12:27803200-27802906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr12:40910443-40910133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:3623540-3623844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:5714474-5714771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:11836079-11836381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:15230970-15230686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:17881708-17882008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:19258125-19258429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:19697254-19697547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:20479477-20479191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:23939074-23939372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:25561218-25561519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:27055456-27055737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:30210328-30210623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:33457991-33458274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:37727986-37728282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:37732938-37732643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 236
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr12:39465428-39465718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 222
               

               
Conread position:
               
133-356
               

               
Cow position:
               
chr12:30753571-30753801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
134-338
               

               
Cow position:
               
chr12:18964078-18963864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
134-344
               

               
Cow position:
               
chr12:5940197-5940411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
134-349
               

               
Cow position:
               
chr12:46333202-46333419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
134-355
               

               
Cow position:
               
chr12:9914638-9914870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
134-356
               

               
Cow position:
               
chr12:30919266-30919507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
134-356
               

               
Cow position:
               
chr12:41159444-41159669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
134-356
               

               
Cow position:
               
chr12:44622203-44622431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
134-405
               

               
Cow position:
               
chr12:4768776-4769067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
134-406
               

               
Cow position:
               
chr12:4719795-4720093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
134-406
               

               
Cow position:
               
chr12:11056729-11057015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
134-406
               

               
Cow position:
               
chr12:30194556-30194842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
135-332
               

               
Cow position:
               
chr12:25452597-25452389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
135-350
               

               
Cow position:
               
chr12:6485357-6485137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
135-410
               

               
Cow position:
               
chr12:1333085-1333370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 207
               

               
Conread position:
               
136-409
               

               
Cow position:
               
chr12:23446573-23446868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 133
               

               
Conread position:
               
137-404
               

               
Cow position:
               
chr12:36790959-36790666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
138-363
               

               
Cow position:
               
chr12:18388429-18388202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
138-410
               

               
Cow position:
               
chr12:30170521-30170805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
139-354
               

               
Cow position:
               
chr12:12300775-12300998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
139-354
               

               
Cow position:
               
chr12:18943804-18943578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
139-354
               

               
Cow position:
               
chr12:29969435-29969659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
139-354
               

               
Cow position:
               
chr12:30438099-30438317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
140-363
               

               
Cow position:
               
chr12:6241167-6241408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
141-355
               

               
Cow position:
               
chr12:18766122-18765892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
141-356
               

               
Cow position:
               
chr12:23797959-23798181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
141-370
               

               
Cow position:
               
chr12:7110056-7110291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
141-410
               

               
Cow position:
               
chr12:18518523-18518825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
141-410
               

               
Cow position:
               
chr12:19715184-19714908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 216
               

               
Conread position:
               
142-349
               

               
Cow position:
               
chr12:23836180-23836404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
142-356
               

               
Cow position:
               
chr12:15699931-15700162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
143-352
               

               
Cow position:
               
chr12:25188042-25188265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
145-340
               

               
Cow position:
               
chr12:12304248-12304446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 131
               

               
Conread position:
               
149-410
               

               
Cow position:
               
chr12:1030849-1031117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 198
               

               
Conread position:
               
151-354
               

               
Cow position:
               
chr12:30590634-30590846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
152-406
               

               
Cow position:
               
chr12:25192921-25193190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
153-354
               

               
Cow position:
               
chr12:4341870-4341664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
154-406
               

               
Cow position:
               
chr12:37137648-37137404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
154-410
               

               
Cow position:
               
chr12:37008830-37008557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
156-356
               

               
Cow position:
               
chr12:14131889-14131686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
157-410
               

               
Cow position:
               
chr12:24116484-24116220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
160-410
               

               
Cow position:
               
chr12:48415637-48415367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
169-356
               

               
Cow position:
               
chr12:5609620-5609430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
169-356
               

               
Cow position:
               
chr12:33319775-33319586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
171-356
               

               
Cow position:
               
chr12:18523456-18523651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
171-366
               

               
Cow position:
               
chr12:42285861-42286061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 189
               

               
Conread position:
               
172-410
               

               
Cow position:
               
chr12:21780058-21780317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
173-404
               

               
Cow position:
               
chr12:6469168-6468926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
178-363
               

               
Cow position:
               
chr12:31269050-31269240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 173
               

               
Conread position:
               
178-404
               

               
Cow position:
               
chr12:5680580-5680812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
178-405
               

               
Cow position:
               
chr12:21922349-21922587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
184-410
               

               
Cow position:
               
chr12:3615908-3616136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
186-348
               

               
Cow position:
               
chr12:42749350-42749512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
186-349
               

               
Cow position:
               
chr12:40200613-40200772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
186-406
               

               
Cow position:
               
chr12:18103701-18103468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
186-410
               

               
Cow position:
               
chr12:6687801-6688038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
187-354
               

               
Cow position:
               
chr12:37514372-37514202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
187-410
               

               
Cow position:
               
chr12:17879393-17879152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
189-348
               

               
Cow position:
               
chr12:4134990-4135151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
194-356
               

               
Cow position:
               
chr12:3880063-3879898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
196-406
               

               
Cow position:
               
chr12:25805212-25804996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
197-406
               

               
Cow position:
               
chr12:45092367-45092589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
197-410
               

               
Cow position:
               
chr12:24273442-24273219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 156
               

               
Conread position:
               
198-349
               

               
Cow position:
               
chr12:9514283-9514436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
198-410
               

               
Cow position:
               
chr12:26575814-26576045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
220-363
               

               
Cow position:
               
chr12:3586060-3586207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
226-406
               

               
Cow position:
               
chr12:44907965-44908146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
227-354
               

               
Cow position:
               
chr12:45002118-45001988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
227-355
               

               
Cow position:
               
chr12:45168070-45167939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
227-356
               

               
Cow position:
               
chr12:7311329-7311464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
227-356
               

               
Cow position:
               
chr12:12912988-12912855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
227-356
               

               
Cow position:
               
chr12:29966056-29966184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
227-356
               

               
Cow position:
               
chr12:34195758-34195628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
227-363
               

               
Cow position:
               
chr12:36994167-36994027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
227-410
               

               
Cow position:
               
chr12:9229551-9229363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
45, 122
               

               
Conread position:
               
228-385
               

               
Cow position:
               
chr12:6754146-6754315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
229-356
               

               
Cow position:
               
chr12:4797251-4797381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
229-370
               

               
Cow position:
               
chr12:39663249-39663101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
230-354
               

               
Cow position:
               
chr12:4793149-4793277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
230-359
               

               
Cow position:
               
chr12:45723268-45723397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
231-410
               

               
Cow position:
               
chr12:22859420-22859603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
231-410
               

               
Cow position:
               
chr12:43854847-43855043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
232-356
               

               
Cow position:
               
chr12:5543839-5543714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
232-409
               

               
Cow position:
               
chr12:24166990-24166797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
233-406
               

               
Cow position:
               
chr12:48578798-48578984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
236-356
               

               
Cow position:
               
chr12:6226186-6226065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
239-349
               

               
Cow position:
               
chr12:42143121-42143234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
239-363
               

               
Cow position:
               
chr12:40270101-40269977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
240-410
               

               
Cow position:
               
chr12:44822258-44822435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
245-406
               

               
Cow position:
               
chr12:6465543-6465376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
251-410
               

               
Cow position:
               
chr12:17702052-17701883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
252-404
               

               
Cow position:
               
chr12:38804616-38804455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
252-409
               

               
Cow position:
               
chr12:17250489-17250656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
252-410
               

               
Cow position:
               
chr12:6666548-6666714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
256-386
               

               
Cow position:
               
chr12:24391301-24391437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
261-404
               

               
Cow position:
               
chr12:18130505-18130658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
263-410
               

               
Cow position:
               
chr12:33873390-33873248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
272-406
               

               
Cow position:
               
chr12:4801364-4801502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
112, 0
               
Show alignments to all cow chromosomes.